RNA–Protein interactions for RNA: ENST00000532145.1

LRRK1-209, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-209ENST00000532145 LYSTQ99698 3801 aa8.84□□□□□ -0.99
LRRK1-209ENST00000532145 A0A087WSZ3 146 aa8.84□□□□□ -1
LRRK1-209ENST00000532145 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.83□□□□□ -1
LRRK1-209ENST00000532145 DNAH9Q9NYC9 4486 aa8.82□□□□□ -1
LRRK1-209ENST00000532145 PRO0628Q9UI54 55 aa8.82□□□□□ -1
LRRK1-209ENST00000532145 H0Y9J4 135 aa8.82□□□□□ -1
LRRK1-209ENST00000532145 DEFB116Q30KQ4 102 aa8.81□□□□□ -1
LRRK1-209ENST00000532145 COL6A5A8TX70 2615 aa8.81□□□□□ -1
LRRK1-209ENST00000532145 SPRR1BP22528 89 aa8.81□□□□□ -1
LRRK1-209ENST00000532145 UBE2AP49459 152 aa8.81□□□□□ -1
LRRK1-209ENST00000532145 KRTAP11-1Q8IUC1 163 aa8.8□□□□□ -1
LRRK1-209ENST00000532145 hDV103S1A0JD37 113 aa8.8□□□□□ -1
LRRK1-209ENST00000532145 C14orf177Q52M58 125 aa8.79□□□□□ -1
LRRK1-209ENST00000532145 PHF5AQ7RTV0 110 aaKnown RBP8.78□□□□□ -1
LRRK1-209ENST00000532145 MPLKIPQ8TAP9 179 aa8.78□□□□□ -1
LRRK1-209ENST00000532145 STAB2Q8WWQ8 2551 aa8.78□□□□□ -1
LRRK1-209ENST00000532145 KRTAP29-1A8MX34 341 aaPredicted RBP8.77□□□□□ -1.01
LRRK1-209ENST00000532145 CHTF8P0CG12 524 aa8.77□□□□□ -1.01
LRRK1-209ENST00000532145 WFDC13Q8IUB5 93 aa8.77□□□□□ -1.01
LRRK1-209ENST00000532145 C1orf64Q8NEQ6 169 aa8.76□□□□□ -1.01
LRRK1-209ENST00000532145 APLNQ9ULZ1 77 aa8.76□□□□□ -1.01
LRRK1-209ENST00000532145 NDUFB1O75438 58 aa8.75□□□□□ -1.01
LRRK1-209ENST00000532145 UBE2DNLQ8IWF7 75 aa8.75□□□□□ -1.01
LRRK1-209ENST00000532145 CYP4F30PQ9H0H9 118 aa8.75□□□□□ -1.01
LRRK1-209ENST00000532145 RPL37AP61513 92 aaKnown RBP8.74□□□□□ -1.01
LRRK1-209ENST00000532145 C9orf163Q8N9P6 203 aa8.74□□□□□ -1.01
LRRK1-209ENST00000532145 SRRM2Q9UQ35 2752 aaKnown RBP8.74□□□□□ -1.01
LRRK1-209ENST00000532145 PRR15Q8IV56 129 aa8.73□□□□□ -1.01
LRRK1-209ENST00000532145 LINC00472Q9H8W2 130 aa8.73□□□□□ -1.01
LRRK1-209ENST00000532145 MGAM2Q2M2H8 2515 aa8.73□□□□□ -1.01
LRRK1-209ENST00000532145 MP68P56378 58 aa8.73□□□□□ -1.01
LRRK1-209ENST00000532145 COL7A1Q02388 2944 aa8.72□□□□□ -1.01
LRRK1-209ENST00000532145 A8MWP4 228 aa8.72□□□□□ -1.01
LRRK1-209ENST00000532145 LRCOL1A6NCL2 159 aa8.71□□□□□ -1.02
LRRK1-209ENST00000532145 DYNC2H1Q8NCM8 4307 aaKnown RBP8.71□□□□□ -1.02
LRRK1-209ENST00000532145 TRAV22A0A0B4J277 110 aa8.7□□□□□ -1.02
LRRK1-209ENST00000532145 CASC2Q6XLA1 102 aa8.7□□□□□ -1.02
LRRK1-209ENST00000532145 PKIGQ9Y2B9 76 aa8.7□□□□□ -1.02
LRRK1-209ENST00000532145 B9D2Q9BPU9 175 aa8.7□□□□□ -1.02
LRRK1-209ENST00000532145 Q1T7F1 81 aa8.69□□□□□ -1.02
LRRK1-209ENST00000532145 KRTAP13-1Q8IUC0 172 aa8.69□□□□□ -1.02
LRRK1-209ENST00000532145 BRK1Q8WUW1 75 aa8.68□□□□□ -1.02
LRRK1-209ENST00000532145 H3BPC8 53 aa8.67□□□□□ -1.02
LRRK1-209ENST00000532145 LINC00208Q96KT6 92 aa8.67□□□□□ -1.02
LRRK1-209ENST00000532145 CSMD3Q7Z407 3707 aa8.67□□□□□ -1.02
LRRK1-209ENST00000532145 DNAH7Q8WXX0 4024 aa8.67□□□□□ -1.02
LRRK1-209ENST00000532145 PRR4Q16378 134 aa8.66□□□□□ -1.02
LRRK1-209ENST00000532145 H0Y9P7 68 aa8.65□□□□□ -1.02
LRRK1-209ENST00000532145 PANO1I0J062 215 aa8.65□□□□□ -1.02
LRRK1-209ENST00000532145 TENM2Q9NT68 2774 aa8.64□□□□□ -1.03
LRRK1-209ENST00000532145 NBDYA0A0U1RRE5 68 aa8.64□□□□□ -1.03
LRRK1-209ENST00000532145 Q6ZRN7 208 aaPredicted RBP8.64□□□□□ -1.03
LRRK1-209ENST00000532145 SPANXA2-OT1Q8N9U9 137 aa8.64□□□□□ -1.03
LRRK1-209ENST00000532145 PLECQ15149 4684 aaKnown RBP8.63□□□□□ -1.03
LRRK1-209ENST00000532145 MMP24-AS1A0A0U1RRL7 71 aa8.61□□□□□ -1.03
LRRK1-209ENST00000532145 SPACA4Q8TDM5 124 aa8.59□□□□□ -1.03
LRRK1-209ENST00000532145 Q96NJ1 140 aa8.58□□□□□ -1.04
LRRK1-209ENST00000532145 MDFIQ99750 246 aa8.58□□□□□ -1.04
LRRK1-209ENST00000532145 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.58□□□□□ -1.04
LRRK1-209ENST00000532145 ASB16-AS1Q495Z4 193 aa8.57□□□□□ -1.04
LRRK1-209ENST00000532145 LINC00483Q53H64 154 aa8.57□□□□□ -1.04
LRRK1-209ENST00000532145 NUPR2A6NF83 97 aa8.56□□□□□ -1.04
LRRK1-209ENST00000532145 IGLV9-49A0A0B4J1Y8 123 aa8.55□□□□□ -1.04
LRRK1-209ENST00000532145 V9GYY9 64 aa8.55□□□□□ -1.04
LRRK1-209ENST00000532145 PSPHP1O15172 72 aa8.53□□□□□ -1.04
LRRK1-209ENST00000532145 MOBPQ13875 183 aa8.53□□□□□ -1.04
LRRK1-209ENST00000532145 TP53AIP1Q9HCN2 124 aa8.52□□□□□ -1.05
LRRK1-209ENST00000532145 ZNF706Q9Y5V0 76 aaPredicted RBP8.5□□□□□ -1.05
LRRK1-209ENST00000532145 A0A087WTM6 91 aa8.5□□□□□ -1.05
LRRK1-209ENST00000532145 WWC2-AS2Q96NR7 200 aa8.5□□□□□ -1.05
LRRK1-209ENST00000532145 VPS13DQ5THJ4 4388 aa8.5□□□□□ -1.05
LRRK1-209ENST00000532145 C8orf17Q9NRJ1 99 aa8.5□□□□□ -1.05
LRRK1-209ENST00000532145 IGLV7-46A0A075B6I9 117 aa8.49□□□□□ -1.05
LRRK1-209ENST00000532145 IGLV5-52A0A0A0MRZ9 124 aa8.48□□□□□ -1.05
LRRK1-209ENST00000532145 A8MUN3 132 aa8.48□□□□□ -1.05
LRRK1-209ENST00000532145 Q6ZR54 194 aa8.48□□□□□ -1.05
LRRK1-209ENST00000532145 PSORS1C2Q9UIG4 136 aa8.47□□□□□ -1.05
LRRK1-209ENST00000532145 Q8N9P0 234 aaPredicted RBP8.47□□□□□ -1.05
LRRK1-209ENST00000532145 STARD9Q9P2P6 4700 aa8.47□□□□□ -1.05
LRRK1-209ENST00000532145 A0A1B0GVX0 72 aa8.46□□□□□ -1.05
LRRK1-209ENST00000532145 C1orf195Q5TG92 126 aa8.46□□□□□ -1.05
LRRK1-209ENST00000532145 HECTD4Q9Y4D8 3996 aa8.46□□□□□ -1.06
LRRK1-209ENST00000532145 DNAH8Q96JB1 4490 aa8.45□□□□□ -1.06
LRRK1-209ENST00000532145 LIMD2Q9BT23 127 aa8.45□□□□□ -1.06
LRRK1-209ENST00000532145 Q5VV11 94 aa8.44□□□□□ -1.06
LRRK1-209ENST00000532145 RTL8CO15255 209 aa8.44□□□□□ -1.06
LRRK1-209ENST00000532145 ZNF861PO60384 105 aa8.44□□□□□ -1.06
LRRK1-209ENST00000532145 PLAC8Q9NZF1 115 aa8.44□□□□□ -1.06
LRRK1-209ENST00000532145 IGHV6-1A0A0B4J1U7 121 aa8.44□□□□□ -1.06
LRRK1-209ENST00000532145 FRAS1Q86XX4 4008 aa8.43□□□□□ -1.06
LRRK1-209ENST00000532145 COA5Q86WW8 74 aa8.43□□□□□ -1.06
LRRK1-209ENST00000532145 CD164Q04900 197 aa8.42□□□□□ -1.06
LRRK1-209ENST00000532145 PRKDCP78527 4128 aaKnown RBP8.42□□□□□ -1.06
LRRK1-209ENST00000532145 PCOTHQ58A44 107 aa8.41□□□□□ -1.06
LRRK1-209ENST00000532145 MRPL34Q9BQ48 92 aaKnown RBP8.41□□□□□ -1.06
LRRK1-209ENST00000532145 ANAPC11Q9NYG5 84 aa8.41□□□□□ -1.06
LRRK1-209ENST00000532145 CDK2AP2O75956 126 aa8.41□□□□□ -1.06
LRRK1-209ENST00000532145 DNAH2Q9P225 4427 aa8.4□□□□□ -1.06
LRRK1-209ENST00000532145 DNAH17Q9UFH2 4485 aa8.39□□□□□ -1.07
LRRK1-209ENST00000532145 NDUFS5O43920 106 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms