RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 SERP2Q8N6R1 65 aa3.52□□□□□ -1.85
PCF11-205ENST00000530906 Q9BRP9 147 aa3.52□□□□□ -1.85
PCF11-205ENST00000530906 IGLV8-61A0A075B6I0 122 aa3.51□□□□□ -1.85
PCF11-205ENST00000530906 EPM2AB3EWF7 344 aa3.51□□□□□ -1.85
PCF11-205ENST00000530906 KRTAP2-2Q9BYT5 123 aa3.51□□□□□ -1.85
PCF11-205ENST00000530906 CRYGAP11844 174 aa3.5□□□□□ -1.85
PCF11-205ENST00000530906 SPRR1BP22528 89 aa3.5□□□□□ -1.85
PCF11-205ENST00000530906 KRTAP10-6P60371 365 aaPredicted RBP3.5□□□□□ -1.85
PCF11-205ENST00000530906 HAMPP81172 84 aa3.5□□□□□ -1.85
PCF11-205ENST00000530906 NREPQ16612 68 aa3.5□□□□□ -1.85
PCF11-205ENST00000530906 C1orf137Q5JT78 98 aa3.5□□□□□ -1.85
PCF11-205ENST00000530906 Q8NBF4 154 aa3.5□□□□□ -1.85
PCF11-205ENST00000530906 SPRR4Q96PI1 79 aa3.5□□□□□ -1.85
PCF11-205ENST00000530906 IGKV2-24A0A0C4DH68 120 aa3.49□□□□□ -1.85
PCF11-205ENST00000530906 A0A1W2PNN7 141 aa3.49□□□□□ -1.85
PCF11-205ENST00000530906 CCDC179H3BU77 68 aa3.49□□□□□ -1.85
PCF11-205ENST00000530906 C9orf153Q5TBE3 101 aa3.49□□□□□ -1.85
PCF11-205ENST00000530906 Q6ZR54 194 aa3.49□□□□□ -1.85
PCF11-205ENST00000530906 FAM19A1Q7Z5A9 133 aa3.49□□□□□ -1.85
PCF11-205ENST00000530906 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.48□□□□□ -1.85
PCF11-205ENST00000530906 IGKV2-30P06310 120 aa3.48□□□□□ -1.85
PCF11-205ENST00000530906 DEFB105AQ8NG35 78 aa3.48□□□□□ -1.85
PCF11-205ENST00000530906 SPACA4Q8TDM5 124 aa3.48□□□□□ -1.85
PCF11-205ENST00000530906 TRAV7A0A075B6U4 112 aa3.47□□□□□ -1.85
PCF11-205ENST00000530906 A0A087WTM6 91 aa3.47□□□□□ -1.85
PCF11-205ENST00000530906 A0A087WVE0 104 aa3.47□□□□□ -1.85
PCF11-205ENST00000530906 M0R2N4 97 aa3.47□□□□□ -1.85
PCF11-205ENST00000530906 BPY2O14599 106 aa3.47□□□□□ -1.85
PCF11-205ENST00000530906 ERC2-IT1O76042 136 aa3.47□□□□□ -1.85
PCF11-205ENST00000530906 RPL37AP61513 92 aaKnown RBP3.47□□□□□ -1.85
PCF11-205ENST00000530906 SMIM29Q86T20 159 aa3.47□□□□□ -1.85
PCF11-205ENST00000530906 HUWE1Q7Z6Z7 4374 aaKnown RBP3.46□□□□□ -1.86
PCF11-205ENST00000530906 A0A1W2PNM2 257 aa3.46□□□□□ -1.86
PCF11-205ENST00000530906 UBE2AP49459 152 aa3.46□□□□□ -1.86
PCF11-205ENST00000530906 ST20-AS1Q8NBB2 130 aa3.46□□□□□ -1.86
PCF11-205ENST00000530906 ZNF706Q9Y5V0 76 aaPredicted RBP3.46□□□□□ -1.86
PCF11-205ENST00000530906 TMEM258P61165 79 aa3.45□□□□□ -1.86
PCF11-205ENST00000530906 PRLHP81277 87 aa3.45□□□□□ -1.86
PCF11-205ENST00000530906 C1orf134Q5TEV5 83 aa3.45□□□□□ -1.86
PCF11-205ENST00000530906 PHF5AQ7RTV0 110 aaKnown RBP3.45□□□□□ -1.86
PCF11-205ENST00000530906 KRTAP13-1Q8IUC0 172 aa3.45□□□□□ -1.86
PCF11-205ENST00000530906 HIGD2AQ9BW72 106 aa3.45□□□□□ -1.86
PCF11-205ENST00000530906 PLAC8Q9NZF1 115 aa3.45□□□□□ -1.86
PCF11-205ENST00000530906 COL7A1Q02388 2944 aa3.45□□□□□ -1.86
PCF11-205ENST00000530906 C3orf84H3BNL1 204 aa3.44□□□□□ -1.86
PCF11-205ENST00000530906 RTL8CO15255 209 aa3.44□□□□□ -1.86
PCF11-205ENST00000530906 NDUFC1O43677 76 aa3.44□□□□□ -1.86
PCF11-205ENST00000530906 IGKV4-1P06312 121 aa3.44□□□□□ -1.86
PCF11-205ENST00000530906 CHTF8P0CG12 524 aa3.44□□□□□ -1.86
PCF11-205ENST00000530906 KLKP1Q107X0 134 aa3.43□□□□□ -1.86
PCF11-205ENST00000530906 IGFL1Q6UW32 110 aa3.43□□□□□ -1.86
PCF11-205ENST00000530906 DPH3Q96FX2 82 aa3.43□□□□□ -1.86
PCF11-205ENST00000530906 IGLV5-52A0A0A0MRZ9 124 aa3.42□□□□□ -1.86
PCF11-205ENST00000530906 J3KT08 172 aa3.42□□□□□ -1.86
PCF11-205ENST00000530906 LINC00483Q53H64 154 aa3.42□□□□□ -1.86
PCF11-205ENST00000530906 DYNC2H1Q8NCM8 4307 aaKnown RBP3.41□□□□□ -1.86
PCF11-205ENST00000530906 DNAH9Q9NYC9 4486 aa3.41□□□□□ -1.86
PCF11-205ENST00000530906 RPS28P62857 69 aaKnown RBP3.41□□□□□ -1.86
PCF11-205ENST00000530906 SCXQ7RTU7 201 aa3.41□□□□□ -1.86
PCF11-205ENST00000530906 SS18L2Q9UHA2 77 aa3.41□□□□□ -1.86
PCF11-205ENST00000530906 PANO1I0J062 215 aa3.4□□□□□ -1.87
PCF11-205ENST00000530906 ATP5EP56381 51 aaPredicted RBP3.4□□□□□ -1.87
PCF11-205ENST00000530906 KRTAP11-1Q8IUC1 163 aa3.4□□□□□ -1.87
PCF11-205ENST00000530906 OCR1Q9BZK8 76 aa3.4□□□□□ -1.87
PCF11-205ENST00000530906 DNAH1Q9P2D7 4330 aa3.4□□□□□ -1.87
PCF11-205ENST00000530906 A0A087WSZ3 146 aa3.39□□□□□ -1.87
PCF11-205ENST00000530906 ZNF861PO60384 105 aa3.39□□□□□ -1.87
PCF11-205ENST00000530906 LY6G6CO95867 125 aa3.39□□□□□ -1.87
PCF11-205ENST00000530906 DSCR10P59022 87 aa3.39□□□□□ -1.87
PCF11-205ENST00000530906 C20orf197Q8N268 126 aa3.39□□□□□ -1.87
PCF11-205ENST00000530906 LCE6AA0A183 80 aa3.38□□□□□ -1.87
PCF11-205ENST00000530906 HCG22E2RYF7 251 aa3.38□□□□□ -1.87
PCF11-205ENST00000530906 PSORS1C2Q9UIG4 136 aa3.38□□□□□ -1.87
PCF11-205ENST00000530906 A8MWP4 228 aa3.37□□□□□ -1.87
PCF11-205ENST00000530906 NDUFB1O75438 58 aa3.37□□□□□ -1.87
PCF11-205ENST00000530906 CD164Q04900 197 aa3.37□□□□□ -1.87
PCF11-205ENST00000530906 Q8N9L7 120 aa3.37□□□□□ -1.87
PCF11-205ENST00000530906 TMEM254Q8TBM7 123 aa3.37□□□□□ -1.87
PCF11-205ENST00000530906 LINC00472Q9H8W2 130 aa3.37□□□□□ -1.87
PCF11-205ENST00000530906 MEGF8Q7Z7M0 2845 aa3.36□□□□□ -1.87
PCF11-205ENST00000530906 H3BPC8 53 aa3.36□□□□□ -1.87
PCF11-205ENST00000530906 H7BZZ5 65 aa3.36□□□□□ -1.87
PCF11-205ENST00000530906 K7EQZ3 153 aa3.36□□□□□ -1.87
PCF11-205ENST00000530906 IGLV7-43P04211 117 aa3.36□□□□□ -1.87
PCF11-205ENST00000530906 C5orf47Q569G3 176 aa3.36□□□□□ -1.87
PCF11-205ENST00000530906 Q6ZSA8 131 aa3.36□□□□□ -1.87
PCF11-205ENST00000530906 PRR15Q8IV56 129 aa3.36□□□□□ -1.87
PCF11-205ENST00000530906 CSMD3Q7Z407 3707 aa3.35□□□□□ -1.87
PCF11-205ENST00000530906 TENM2Q9NT68 2774 aa3.35□□□□□ -1.87
PCF11-205ENST00000530906 A0A0U1RQV1 116 aa3.35□□□□□ -1.87
PCF11-205ENST00000530906 FAM236DA0A1B0GTK5 79 aa3.35□□□□□ -1.87
PCF11-205ENST00000530906 FAM236CP0DP71 79 aa3.35□□□□□ -1.87
PCF11-205ENST00000530906 LCE1EQ5T753 118 aa3.35□□□□□ -1.87
PCF11-205ENST00000530906 SSBP3-AS1Q7Z2R9 100 aa3.35□□□□□ -1.87
PCF11-205ENST00000530906 STARD9Q9P2P6 4700 aa3.34□□□□□ -1.87
PCF11-205ENST00000530906 DNAH7Q8WXX0 4024 aa3.34□□□□□ -1.87
PCF11-205ENST00000530906 PLECQ15149 4684 aaKnown RBP3.34□□□□□ -1.87
PCF11-205ENST00000530906 MOBPQ13875 183 aa3.34□□□□□ -1.87
PCF11-205ENST00000530906 FAM229BQ4G0N7 80 aa3.34□□□□□ -1.87
PCF11-205ENST00000530906 SERP1Q9Y6X1 66 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms