RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 CHKB-CPT1BH3BT56 60 aa8.01□□□□□ -1.13
SCN3B-206ENST00000530277 NDUFC1O43677 76 aa8.01□□□□□ -1.13
SCN3B-206ENST00000530277 KCNQ1DNQ9H478 68 aa8.01□□□□□ -1.13
SCN3B-206ENST00000530277 C4orf48Q5BLP8 95 aa8□□□□□ -1.13
SCN3B-206ENST00000530277 TRBV7-4A0A0J9YYF1 115 aa7.99□□□□□ -1.13
SCN3B-206ENST00000530277 MOBPQ13875 183 aa7.99□□□□□ -1.13
SCN3B-206ENST00000530277 NUPR2A6NF83 97 aa7.99□□□□□ -1.13
SCN3B-206ENST00000530277 OBSCN-AS1Q96MR7 158 aa7.98□□□□□ -1.13
SCN3B-206ENST00000530277 A0A1W2PNM2 257 aa7.97□□□□□ -1.13
SCN3B-206ENST00000530277 H0Y9P7 68 aa7.97□□□□□ -1.13
SCN3B-206ENST00000530277 C16orf90A8MZG2 172 aa7.96□□□□□ -1.13
SCN3B-206ENST00000530277 NBDYA0A0U1RRE5 68 aa7.96□□□□□ -1.14
SCN3B-206ENST00000530277 A6NED7 52 aa7.95□□□□□ -1.14
SCN3B-206ENST00000530277 IGFL1Q6UW32 110 aa7.95□□□□□ -1.14
SCN3B-206ENST00000530277 LINC01600Q96MT4 127 aa7.94□□□□□ -1.14
SCN3B-206ENST00000530277 F8WDY8 70 aa7.93□□□□□ -1.14
SCN3B-206ENST00000530277 TRRAPQ9Y4A5 3859 aa7.93□□□□□ -1.14
SCN3B-206ENST00000530277 C1orf134Q5TEV5 83 aa7.92□□□□□ -1.14
SCN3B-206ENST00000530277 PRR15LQ9BU68 103 aa7.92□□□□□ -1.14
SCN3B-206ENST00000530277 FAM229BQ4G0N7 80 aa7.91□□□□□ -1.14
SCN3B-206ENST00000530277 C1orf64Q8NEQ6 169 aa7.91□□□□□ -1.14
SCN3B-206ENST00000530277 FP248Q71RG6 208 aaPredicted RBP7.9□□□□□ -1.14
SCN3B-206ENST00000530277 A8MUN3 132 aa7.88□□□□□ -1.15
SCN3B-206ENST00000530277 RTL8CO15255 209 aa7.88□□□□□ -1.15
SCN3B-206ENST00000530277 KRTAP1-5Q9BYS1 174 aa7.88□□□□□ -1.15
SCN3B-206ENST00000530277 ATP5EP56381 51 aaPredicted RBP7.88□□□□□ -1.15
SCN3B-206ENST00000530277 ZNF706Q9Y5V0 76 aaPredicted RBP7.87□□□□□ -1.15
SCN3B-206ENST00000530277 TGP01266 2768 aa7.86□□□□□ -1.15
SCN3B-206ENST00000530277 KLKP1Q107X0 134 aa7.86□□□□□ -1.15
SCN3B-206ENST00000530277 hDV103S1A0JD37 113 aa7.85□□□□□ -1.15
SCN3B-206ENST00000530277 KRTAP26-1Q6PEX3 210 aa7.84□□□□□ -1.15
SCN3B-206ENST00000530277 SPACA4Q8TDM5 124 aa7.84□□□□□ -1.15
SCN3B-206ENST00000530277 WIPF1O43516 503 aa7.84□□□□□ -1.16
SCN3B-206ENST00000530277 SPINK1P00995 79 aa7.83□□□□□ -1.16
SCN3B-206ENST00000530277 ZNF469Q96JG9 3925 aaPredicted RBP7.82□□□□□ -1.16
SCN3B-206ENST00000530277 BCE1O60756 84 aa7.82□□□□□ -1.16
SCN3B-206ENST00000530277 C9orf163Q8N9P6 203 aa7.82□□□□□ -1.16
SCN3B-206ENST00000530277 TLX1NBP0CAT3 122 aa7.8□□□□□ -1.16
SCN3B-206ENST00000530277 APLNQ9ULZ1 77 aa7.8□□□□□ -1.16
SCN3B-206ENST00000530277 IGLV5-48A0A075B6I7 105 aa7.79□□□□□ -1.16
SCN3B-206ENST00000530277 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.79□□□□□ -1.16
SCN3B-206ENST00000530277 IGKV2D-30A0A075B6S6 120 aa7.79□□□□□ -1.16
SCN3B-206ENST00000530277 IGKV2-30P06310 120 aa7.79□□□□□ -1.16
SCN3B-206ENST00000530277 SPAG11AQ6PDA7 123 aa7.78□□□□□ -1.16
SCN3B-206ENST00000530277 DSCR10P59022 87 aa7.78□□□□□ -1.16
SCN3B-206ENST00000530277 A0A087WTM6 91 aa7.77□□□□□ -1.17
SCN3B-206ENST00000530277 TRAV22A0A0B4J277 110 aa7.77□□□□□ -1.17
SCN3B-206ENST00000530277 PSORS1C2Q9UIG4 136 aa7.76□□□□□ -1.17
SCN3B-206ENST00000530277 DMBT1Q9UGM3 2413 aaPredicted RBP7.75□□□□□ -1.17
SCN3B-206ENST00000530277 A8MWP4 228 aa7.74□□□□□ -1.17
SCN3B-206ENST00000530277 OCR1Q9BZK8 76 aa7.74□□□□□ -1.17
SCN3B-206ENST00000530277 PRR15Q8IV56 129 aa7.74□□□□□ -1.17
SCN3B-206ENST00000530277 SRRM2Q9UQ35 2752 aaKnown RBP7.73□□□□□ -1.17
SCN3B-206ENST00000530277 PLA2G2DQ9UNK4 145 aa7.73□□□□□ -1.17
SCN3B-206ENST00000530277 PANO1I0J062 215 aa7.72□□□□□ -1.17
SCN3B-206ENST00000530277 SMR3BP02814 79 aaPredicted RBP7.7□□□□□ -1.18
SCN3B-206ENST00000530277 CNBPP62633 177 aaKnown RBP7.7□□□□□ -1.18
SCN3B-206ENST00000530277 A0A1B0GW54 56 aa7.68□□□□□ -1.18
SCN3B-206ENST00000530277 IGLV8-61A0A075B6I0 122 aa7.68□□□□□ -1.18
SCN3B-206ENST00000530277 TNP2Q05952 138 aa7.68□□□□□ -1.18
SCN3B-206ENST00000530277 ZNF861PO60384 105 aa7.66□□□□□ -1.18
SCN3B-206ENST00000530277 SPRR1AP35321 89 aa7.66□□□□□ -1.18
SCN3B-206ENST00000530277 KRTAP11-1Q8IUC1 163 aa7.66□□□□□ -1.18
SCN3B-206ENST00000530277 IGLV5-37A0A075B6J1 123 aa7.66□□□□□ -1.18
SCN3B-206ENST00000530277 A8MU10 97 aa7.66□□□□□ -1.18
SCN3B-206ENST00000530277 SPRR4Q96PI1 79 aa7.65□□□□□ -1.18
SCN3B-206ENST00000530277 KRTAP7-1Q8IUC3 87 aa7.65□□□□□ -1.18
SCN3B-206ENST00000530277 C8orf17Q9NRJ1 99 aa7.65□□□□□ -1.18
SCN3B-206ENST00000530277 PLA2G1BP04054 148 aaKnown RBP7.62□□□□□ -1.19
SCN3B-206ENST00000530277 MRPL34Q9BQ48 92 aaKnown RBP7.62□□□□□ -1.19
SCN3B-206ENST00000530277 COA5Q86WW8 74 aa7.61□□□□□ -1.19
SCN3B-206ENST00000530277 FLG2Q5D862 2391 aaPredicted RBP7.61□□□□□ -1.19
SCN3B-206ENST00000530277 LINC00313P59037 77 aa7.61□□□□□ -1.19
SCN3B-206ENST00000530277 KRTAP4-16G5E9R7 235 aaPredicted RBP7.6□□□□□ -1.19
SCN3B-206ENST00000530277 TYMSOSQ8TAI1 123 aa7.6□□□□□ -1.19
SCN3B-206ENST00000530277 A0A1B0GVX0 72 aa7.59□□□□□ -1.19
SCN3B-206ENST00000530277 TP53AIP1Q9HCN2 124 aa7.58□□□□□ -1.2
SCN3B-206ENST00000530277 Q96NJ1 140 aa7.57□□□□□ -1.2
SCN3B-206ENST00000530277 CSMD3Q7Z407 3707 aa7.57□□□□□ -1.2
SCN3B-206ENST00000530277 IGLV7-43P04211 117 aa7.57□□□□□ -1.2
SCN3B-206ENST00000530277 COL7A1Q02388 2944 aa7.57□□□□□ -1.2
SCN3B-206ENST00000530277 PRR26Q8N8Z3 221 aa7.55□□□□□ -1.2
SCN3B-206ENST00000530277 LIMD2Q9BT23 127 aa7.55□□□□□ -1.2
SCN3B-206ENST00000530277 C7orf65Q6ZTY9 151 aa7.55□□□□□ -1.2
SCN3B-206ENST00000530277 WWC2-AS2Q96NR7 200 aa7.54□□□□□ -1.2
SCN3B-206ENST00000530277 C9orf92A6NGG3 77 aa7.54□□□□□ -1.2
SCN3B-206ENST00000530277 CD164Q04900 197 aa7.52□□□□□ -1.21
SCN3B-206ENST00000530277 FBN3Q75N90 2809 aa7.52□□□□□ -1.21
SCN3B-206ENST00000530277 RBM12B-AS1Q9P1G2 102 aa7.51□□□□□ -1.21
SCN3B-206ENST00000530277 ANK3Q12955 4377 aaKnown RBP7.5□□□□□ -1.21
SCN3B-206ENST00000530277 AKAP9Q99996 3911 aa7.49□□□□□ -1.21
SCN3B-206ENST00000530277 MMP24-AS1A0A0U1RRL7 71 aa7.49□□□□□ -1.21
SCN3B-206ENST00000530277 H3BPC8 53 aa7.49□□□□□ -1.21
SCN3B-206ENST00000530277 PRAC1Q96KF2 57 aa7.49□□□□□ -1.21
SCN3B-206ENST00000530277 LINC00472Q9H8W2 130 aa7.49□□□□□ -1.21
SCN3B-206ENST00000530277 A0A1B0GU69 56 aa7.49□□□□□ -1.21
SCN3B-206ENST00000530277 ACYP2P14621 99 aa7.48□□□□□ -1.21
SCN3B-206ENST00000530277 KRTAP10-2P60368 255 aa7.47□□□□□ -1.21
SCN3B-206ENST00000530277 KTN1-AS1Q86SY8 53 aa7.47□□□□□ -1.21
SCN3B-206ENST00000530277 Q8N9P0 234 aaPredicted RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms