RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 LUZP6Q538Z0 58 aa2.82□□□□□ -1.96
AMBRA1-209ENST00000529963 SPRR4Q96PI1 79 aa2.82□□□□□ -1.96
AMBRA1-209ENST00000529963 CBY1Q9Y3M2 126 aa2.82□□□□□ -1.96
AMBRA1-209ENST00000529963 SCGB1C2P0DMR2 95 aa2.81□□□□□ -1.96
AMBRA1-209ENST00000529963 ZNF22P17026 224 aaPredicted RBP2.81□□□□□ -1.96
AMBRA1-209ENST00000529963 ASB16-AS1Q495Z4 193 aa2.81□□□□□ -1.96
AMBRA1-209ENST00000529963 LCE3AQ5TA76 89 aa2.81□□□□□ -1.96
AMBRA1-209ENST00000529963 ZNF625Q96I27 306 aaPredicted RBP2.81□□□□□ -1.96
AMBRA1-209ENST00000529963 HIST1H2BLQ99880 126 aa2.81□□□□□ -1.96
AMBRA1-209ENST00000529963 ANAPC13Q9BS18 74 aa2.81□□□□□ -1.96
AMBRA1-209ENST00000529963 RBM12B-AS1Q9P1G2 102 aa2.81□□□□□ -1.96
AMBRA1-209ENST00000529963 NDUFA12Q9UI09 145 aa2.81□□□□□ -1.96
AMBRA1-209ENST00000529963 HSPB8Q9UJY1 196 aa2.81□□□□□ -1.96
AMBRA1-209ENST00000529963 SPINK1P00995 79 aa2.8□□□□□ -1.96
AMBRA1-209ENST00000529963 LINC00158P58513 81 aa2.8□□□□□ -1.96
AMBRA1-209ENST00000529963 Q8NDZ9 215 aa2.8□□□□□ -1.96
AMBRA1-209ENST00000529963 IFI27L1Q96BM0 104 aa2.8□□□□□ -1.96
AMBRA1-209ENST00000529963 PMCHL2Q9BQD1 86 aa2.8□□□□□ -1.96
AMBRA1-209ENST00000529963 C11orf86A6NJI1 115 aa2.79□□□□□ -1.96
AMBRA1-209ENST00000529963 C3orf79P0CE67 100 aa2.79□□□□□ -1.96
AMBRA1-209ENST00000529963 TMEM170BQ5T4T1 132 aa2.79□□□□□ -1.96
AMBRA1-209ENST00000529963 DAND5Q8N907 189 aa2.79□□□□□ -1.96
AMBRA1-209ENST00000529963 LOC105371267A0A1B0GV96 52 aa2.78□□□□□ -1.96
AMBRA1-209ENST00000529963 ETDCA0A1B0GVM5 59 aa2.78□□□□□ -1.96
AMBRA1-209ENST00000529963 C20orf202A1L168 122 aa2.78□□□□□ -1.96
AMBRA1-209ENST00000529963 SYS1-DBNDD2H3BUS1 97 aa2.78□□□□□ -1.96
AMBRA1-209ENST00000529963 S100A12P80511 92 aa2.78□□□□□ -1.96
AMBRA1-209ENST00000529963 ATOH7Q8N100 152 aa2.78□□□□□ -1.96
AMBRA1-209ENST00000529963 NCR3O14931 201 aa2.78□□□□□ -1.97
AMBRA1-209ENST00000529963 SPRR1AP35321 89 aa2.78□□□□□ -1.97
AMBRA1-209ENST00000529963 RPS29P62273 56 aaKnown RBP2.78□□□□□ -1.97
AMBRA1-209ENST00000529963 LINC00483Q53H64 154 aa2.78□□□□□ -1.97
AMBRA1-209ENST00000529963 MEIG1Q5JSS6 88 aa2.78□□□□□ -1.97
AMBRA1-209ENST00000529963 SMCR5Q8TEV8 140 aa2.78□□□□□ -1.97
AMBRA1-209ENST00000529963 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.97
AMBRA1-209ENST00000529963 KCNQ1DNQ9H478 68 aa2.78□□□□□ -1.97
AMBRA1-209ENST00000529963 SYNE2Q8WXH0 6885 aaKnown RBP2.77□□□□□ -1.97
AMBRA1-209ENST00000529963 LINC00587B1AMM8 73 aa2.77□□□□□ -1.97
AMBRA1-209ENST00000529963 SLC25A20O43772 301 aa2.77□□□□□ -1.97
AMBRA1-209ENST00000529963 IGKCP01834 107 aa2.77□□□□□ -1.97
AMBRA1-209ENST00000529963 MOBPQ13875 183 aa2.77□□□□□ -1.97
AMBRA1-209ENST00000529963 SSBP3-AS1Q7Z2R9 100 aa2.77□□□□□ -1.97
AMBRA1-209ENST00000529963 TRAV12-1A0A0B4J245 112 aa2.76□□□□□ -1.97
AMBRA1-209ENST00000529963 C8orf87E5RJ46 101 aa2.76□□□□□ -1.97
AMBRA1-209ENST00000529963 DPM2O94777 84 aa2.76□□□□□ -1.97
AMBRA1-209ENST00000529963 SMIM13P0DJ93 91 aa2.76□□□□□ -1.97
AMBRA1-209ENST00000529963 JOSD1Q15040 202 aaPredicted RBP2.76□□□□□ -1.97
AMBRA1-209ENST00000529963 PYY3Q5JQD4 70 aa2.76□□□□□ -1.97
AMBRA1-209ENST00000529963 LINC01545Q5VT33 79 aa2.76□□□□□ -1.97
AMBRA1-209ENST00000529963 MIR7-3HGQ8N6C7 128 aa2.76□□□□□ -1.97
AMBRA1-209ENST00000529963 SPANXA2-OT1Q8N9U9 137 aa2.76□□□□□ -1.97
AMBRA1-209ENST00000529963 KRTAP4-1Q9BYQ7 146 aa2.76□□□□□ -1.97
AMBRA1-209ENST00000529963 TRBV10-3A0A0K0K1G6 114 aa2.75□□□□□ -1.97
AMBRA1-209ENST00000529963 PLNP26678 52 aa2.75□□□□□ -1.97
AMBRA1-209ENST00000529963 C4orf26Q17RF5 130 aa2.75□□□□□ -1.97
AMBRA1-209ENST00000529963 MACF1Q9UPN3 7388 aaKnown RBP2.75□□□□□ -1.97
AMBRA1-209ENST00000529963 MYMXA0A1B0GTQ4 84 aa2.74□□□□□ -1.97
AMBRA1-209ENST00000529963 ERC2-IT1O76042 136 aa2.74□□□□□ -1.97
AMBRA1-209ENST00000529963 DDTP30046 118 aa2.74□□□□□ -1.97
AMBRA1-209ENST00000529963 SPATA45Q537H7 98 aa2.74□□□□□ -1.97
AMBRA1-209ENST00000529963 C9orf153Q5TBE3 101 aa2.74□□□□□ -1.97
AMBRA1-209ENST00000529963 VAMP8Q9BV40 100 aa2.74□□□□□ -1.97
AMBRA1-209ENST00000529963 TRBV10-2A0A0K0K1G8 114 aa2.73□□□□□ -1.97
AMBRA1-209ENST00000529963 KRTAP5-9P26371 169 aa2.73□□□□□ -1.97
AMBRA1-209ENST00000529963 MP68P56378 58 aa2.73□□□□□ -1.97
AMBRA1-209ENST00000529963 Q6ZRX8 168 aa2.73□□□□□ -1.97
AMBRA1-209ENST00000529963 C12orf57Q99622 126 aa2.73□□□□□ -1.97
AMBRA1-209ENST00000529963 Q9BRP9 147 aa2.73□□□□□ -1.97
AMBRA1-209ENST00000529963 MIEN1Q9BRT3 115 aa2.73□□□□□ -1.97
AMBRA1-209ENST00000529963 SMIM6P0DI80 62 aa2.73□□□□□ -1.97
AMBRA1-209ENST00000529963 LGALS3P17931 250 aaKnown RBP2.73□□□□□ -1.97
AMBRA1-209ENST00000529963 S100A7L2Q5SY68 101 aa2.73□□□□□ -1.97
AMBRA1-209ENST00000529963 C14orf144Q96I85 54 aa2.73□□□□□ -1.97
AMBRA1-209ENST00000529963 TTTY13Q9BZ97 58 aa2.73□□□□□ -1.97
AMBRA1-209ENST00000529963 PRO1933Q9H354 126 aa2.73□□□□□ -1.97
AMBRA1-209ENST00000529963 TRAV23DV6A0A075B6W5 121 aa2.72□□□□□ -1.97
AMBRA1-209ENST00000529963 LOC107984156A0A0G2JMH3 177 aa2.72□□□□□ -1.97
AMBRA1-209ENST00000529963 J3QQQ9 107 aa2.72□□□□□ -1.97
AMBRA1-209ENST00000529963 LEPROTO15243 131 aa2.72□□□□□ -1.97
AMBRA1-209ENST00000529963 KRTAP5-4Q6L8H1 288 aa2.72□□□□□ -1.97
AMBRA1-209ENST00000529963 ARL17AQ8IVW1 177 aa2.72□□□□□ -1.97
AMBRA1-209ENST00000529963 LIMD2Q9BT23 127 aa2.72□□□□□ -1.97
AMBRA1-209ENST00000529963 LCE3DQ9BYE3 92 aa2.72□□□□□ -1.97
AMBRA1-209ENST00000529963 SSPOA2VEC9 5147 aa2.71□□□□□ -1.98
AMBRA1-209ENST00000529963 ZNF815PA8K554 130 aa2.71□□□□□ -1.98
AMBRA1-209ENST00000529963 NDUFC2O95298 119 aa2.71□□□□□ -1.98
AMBRA1-209ENST00000529963 IGLV6-57P01721 117 aa2.71□□□□□ -1.98
AMBRA1-209ENST00000529963 HINT1P49773 126 aaPredicted RBP2.71□□□□□ -1.98
AMBRA1-209ENST00000529963 TSPEAR-AS2P59090 65 aa2.71□□□□□ -1.98
AMBRA1-209ENST00000529963 PCOTHQ58A44 107 aa2.71□□□□□ -1.98
AMBRA1-209ENST00000529963 SLC25A34Q6PIV7 304 aa2.71□□□□□ -1.98
AMBRA1-209ENST00000529963 SCGB1D4Q6XE38 83 aa2.71□□□□□ -1.98
AMBRA1-209ENST00000529963 ST20-AS1Q8NBB2 130 aa2.71□□□□□ -1.98
AMBRA1-209ENST00000529963 ZNF73O43830 326 aaPredicted RBP2.7□□□□□ -1.98
AMBRA1-209ENST00000529963 MT1HP80294 61 aa2.7□□□□□ -1.98
AMBRA1-209ENST00000529963 TSTD3H0UI37 97 aa2.69□□□□□ -1.98
AMBRA1-209ENST00000529963 K7ERS5 55 aa2.69□□□□□ -1.98
AMBRA1-209ENST00000529963 COX8AP10176 69 aa2.69□□□□□ -1.98
AMBRA1-209ENST00000529963 NPC2P61916 151 aa2.69□□□□□ -1.98
AMBRA1-209ENST00000529963 KRTAP19-2Q3LHN2 52 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms