RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 TRBV10-2A0A0K0K1G8 114 aa4.83□□□□□ -1.64
VPS11-203ENST00000529545 TMEM223A0PJW6 202 aa4.83□□□□□ -1.64
VPS11-203ENST00000529545 S100A7L2Q5SY68 101 aa4.83□□□□□ -1.64
VPS11-203ENST00000529545 HRCT1Q6UXD1 115 aa4.83□□□□□ -1.64
VPS11-203ENST00000529545 MYMXA0A1B0GTQ4 84 aa4.82□□□□□ -1.64
VPS11-203ENST00000529545 HSBP1L1C9JCN9 74 aa4.82□□□□□ -1.64
VPS11-203ENST00000529545 K7EP34 96 aa4.82□□□□□ -1.64
VPS11-203ENST00000529545 K7ERU9 68 aa4.82□□□□□ -1.64
VPS11-203ENST00000529545 HSD52Q0P140 79 aa4.82□□□□□ -1.64
VPS11-203ENST00000529545 SPANXB1Q9NS25 103 aaPredicted RBP4.81□□□□□ -1.64
VPS11-203ENST00000529545 ST20-AS1Q8NBB2 130 aa4.8□□□□□ -1.64
VPS11-203ENST00000529545 LAMTOR3Q9UHA4 124 aa4.8□□□□□ -1.64
VPS11-203ENST00000529545 TRAV23DV6A0A075B6W5 121 aa4.79□□□□□ -1.64
VPS11-203ENST00000529545 LOC107984156A0A0G2JMH3 177 aa4.79□□□□□ -1.64
VPS11-203ENST00000529545 A0A1W2PPM0 123 aa4.79□□□□□ -1.64
VPS11-203ENST00000529545 A6NDN8 102 aa4.79□□□□□ -1.64
VPS11-203ENST00000529545 ZNF73O43830 326 aaPredicted RBP4.79□□□□□ -1.64
VPS11-203ENST00000529545 GTF2H5Q6ZYL4 71 aa4.79□□□□□ -1.64
VPS11-203ENST00000529545 ARL17AQ8IVW1 177 aa4.79□□□□□ -1.64
VPS11-203ENST00000529545 IFI27L1Q96BM0 104 aa4.79□□□□□ -1.64
VPS11-203ENST00000529545 TRAV12-1A0A0B4J245 112 aa4.78□□□□□ -1.64
VPS11-203ENST00000529545 A0A1B0GWB2 263 aa4.78□□□□□ -1.64
VPS11-203ENST00000529545 E9PLD3 99 aa4.78□□□□□ -1.64
VPS11-203ENST00000529545 RPL37P61927 97 aaKnown RBP4.78□□□□□ -1.64
VPS11-203ENST00000529545 CD164Q04900 197 aa4.78□□□□□ -1.64
VPS11-203ENST00000529545 TAL2Q16559 108 aa4.78□□□□□ -1.64
VPS11-203ENST00000529545 NDUFC2O95298 119 aa4.77□□□□□ -1.65
VPS11-203ENST00000529545 SCGB1A1P11684 91 aa4.77□□□□□ -1.65
VPS11-203ENST00000529545 PCP2Q8IVA1 136 aa4.77□□□□□ -1.65
VPS11-203ENST00000529545 VPS25Q9BRG1 176 aa4.77□□□□□ -1.65
VPS11-203ENST00000529545 H3BUT2 72 aa4.76□□□□□ -1.65
VPS11-203ENST00000529545 CFC1P0CG37 223 aa4.76□□□□□ -1.65
VPS11-203ENST00000529545 SPRR1BP22528 89 aa4.76□□□□□ -1.65
VPS11-203ENST00000529545 Q6Q795 121 aa4.76□□□□□ -1.65
VPS11-203ENST00000529545 PRO0461Q9UI25 63 aa4.76□□□□□ -1.65
VPS11-203ENST00000529545 H7C2G1 150 aa4.75□□□□□ -1.65
VPS11-203ENST00000529545 FXYD2P54710 66 aa4.75□□□□□ -1.65
VPS11-203ENST00000529545 DHRS4-AS1Q9P1J3 65 aa4.75□□□□□ -1.65
VPS11-203ENST00000529545 F8W1H4 67 aa4.74□□□□□ -1.65
VPS11-203ENST00000529545 LEPROTO15243 131 aa4.74□□□□□ -1.65
VPS11-203ENST00000529545 CEND1Q8N111 149 aa4.74□□□□□ -1.65
VPS11-203ENST00000529545 SPCS1Q9Y6A9 102 aa4.74□□□□□ -1.65
VPS11-203ENST00000529545 FABP2P12104 132 aa4.73□□□□□ -1.65
VPS11-203ENST00000529545 NMUP48645 174 aa4.73□□□□□ -1.65
VPS11-203ENST00000529545 C1orf195Q5TG92 126 aa4.73□□□□□ -1.65
VPS11-203ENST00000529545 Q5XG85 94 aa4.73□□□□□ -1.65
VPS11-203ENST00000529545 FLGP20930 4061 aaPredicted RBP4.73□□□□□ -1.65
VPS11-203ENST00000529545 J3QQQ9 107 aa4.72□□□□□ -1.65
VPS11-203ENST00000529545 DPM2O94777 84 aa4.72□□□□□ -1.65
VPS11-203ENST00000529545 IGKCP01834 107 aa4.72□□□□□ -1.65
VPS11-203ENST00000529545 LGALS3P17931 250 aaKnown RBP4.72□□□□□ -1.65
VPS11-203ENST00000529545 HERVK_113P61574 105 aa4.72□□□□□ -1.65
VPS11-203ENST00000529545 Q1RN00 199 aa4.72□□□□□ -1.65
VPS11-203ENST00000529545 OR13C6PQ8NH95 151 aa4.72□□□□□ -1.65
VPS11-203ENST00000529545 SSPOA2VEC9 5147 aa4.72□□□□□ -1.65
VPS11-203ENST00000529545 H0Y8G0 127 aa4.71□□□□□ -1.66
VPS11-203ENST00000529545 TSPEAR-AS2P59090 65 aa4.71□□□□□ -1.66
VPS11-203ENST00000529545 NPC2P61916 151 aa4.71□□□□□ -1.66
VPS11-203ENST00000529545 DEFB105AQ8NG35 78 aa4.71□□□□□ -1.66
VPS11-203ENST00000529545 SIGMAR1Q99720 223 aa4.71□□□□□ -1.66
VPS11-203ENST00000529545 USH2AO75445 5202 aa4.71□□□□□ -1.66
VPS11-203ENST00000529545 TEX49A0A1B0GTD5 131 aa4.7□□□□□ -1.66
VPS11-203ENST00000529545 TCL1BO95988 128 aa4.7□□□□□ -1.66
VPS11-203ENST00000529545 ATP11AUNQ6ZP68 121 aa4.7□□□□□ -1.66
VPS11-203ENST00000529545 SMIM29Q86T20 159 aa4.7□□□□□ -1.66
VPS11-203ENST00000529545 NAA38Q9BRA0 125 aaKnown RBP4.7□□□□□ -1.66
VPS11-203ENST00000529545 TTTY13Q9BZ97 58 aa4.7□□□□□ -1.66
VPS11-203ENST00000529545 TRIAP1O43715 76 aa4.69□□□□□ -1.66
VPS11-203ENST00000529545 COX7BP24311 80 aa4.69□□□□□ -1.66
VPS11-203ENST00000529545 PLNP26678 52 aa4.69□□□□□ -1.66
VPS11-203ENST00000529545 RAB37Q96AX2 223 aa4.69□□□□□ -1.66
VPS11-203ENST00000529545 SOSTDC1Q6X4U4 206 aa4.68□□□□□ -1.66
VPS11-203ENST00000529545 ELOF1P60002 83 aaKnown RBP4.67□□□□□ -1.66
VPS11-203ENST00000529545 SPANXCQ9NY87 97 aa4.67□□□□□ -1.66
VPS11-203ENST00000529545 A0A0J9YXY3 114 aa4.66□□□□□ -1.66
VPS11-203ENST00000529545 H3BMG7 143 aa4.66□□□□□ -1.66
VPS11-203ENST00000529545 K7ERJ3 54 aa4.66□□□□□ -1.66
VPS11-203ENST00000529545 ADAMTSL4-AS1Q5T5F5 129 aa4.66□□□□□ -1.66
VPS11-203ENST00000529545 SPANXDQ9BXN6 97 aa4.66□□□□□ -1.66
VPS11-203ENST00000529545 NHP2Q9NX24 153 aaKnown RBP4.66□□□□□ -1.66
VPS11-203ENST00000529545 J3QR89 54 aa4.65□□□□□ -1.67
VPS11-203ENST00000529545 C6orf99Q4VX62 202 aa4.65□□□□□ -1.67
VPS11-203ENST00000529545 A0A0G2JQZ4 141 aa4.64□□□□□ -1.67
VPS11-203ENST00000529545 ETDBQ3ZM63 59 aa4.64□□□□□ -1.67
VPS11-203ENST00000529545 LINC00308Q8TCZ7 52 aa4.64□□□□□ -1.67
VPS11-203ENST00000529545 FCGBPQ9Y6R7 5405 aaPredicted RBP4.64□□□□□ -1.67
VPS11-203ENST00000529545 TRBV20-1A0A075B6N2 111 aa4.63□□□□□ -1.67
VPS11-203ENST00000529545 Q75L30 129 aa4.63□□□□□ -1.67
VPS11-203ENST00000529545 SVIPQ8NHG7 77 aa4.63□□□□□ -1.67
VPS11-203ENST00000529545 TRBV7-6A0A0J9YX20 115 aa4.62□□□□□ -1.67
VPS11-203ENST00000529545 OBSCN-AS1Q96MR7 158 aa4.62□□□□□ -1.67
VPS11-203ENST00000529545 HIST1H4GQ99525 98 aa4.62□□□□□ -1.67
VPS11-203ENST00000529545 IGLV5-48A0A075B6I7 105 aa4.61□□□□□ -1.67
VPS11-203ENST00000529545 F8WEM9 126 aa4.61□□□□□ -1.67
VPS11-203ENST00000529545 MTURNQ8N3F0 131 aa4.61□□□□□ -1.67
VPS11-203ENST00000529545 LINC00846Q9NV44 126 aa4.61□□□□□ -1.67
VPS11-203ENST00000529545 A0A1B0GV72 72 aa4.6□□□□□ -1.67
VPS11-203ENST00000529545 TIMM17BO60830 172 aa4.6□□□□□ -1.67
VPS11-203ENST00000529545 PPDPFLQ8WWR9 84 aa4.6□□□□□ -1.67
VPS11-203ENST00000529545 A4D1N5 150 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms