RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 ZNF815PA8K554 130 aa9.33□□□□□ -0.92
SSRP1-204ENST00000529002 Q6JHZ5 121 aa9.31□□□□□ -0.92
SSRP1-204ENST00000529002 LST1O00453 97 aa9.3□□□□□ -0.92
SSRP1-204ENST00000529002 TRGC2P03986 189 aa9.29□□□□□ -0.92
SSRP1-204ENST00000529002 HRES1P13985 223 aa9.29□□□□□ -0.92
SSRP1-204ENST00000529002 MPLKIPQ8TAP9 179 aa9.29□□□□□ -0.92
SSRP1-204ENST00000529002 A4D1N5 150 aa9.28□□□□□ -0.92
SSRP1-204ENST00000529002 SMIM11BQ8TCY0 68 aa9.28□□□□□ -0.92
SSRP1-204ENST00000529002 NHP2Q9NX24 153 aaKnown RBP9.28□□□□□ -0.92
SSRP1-204ENST00000529002 SNAPINO95295 136 aa9.27□□□□□ -0.93
SSRP1-204ENST00000529002 OCIAD2Q56VL3 154 aa9.27□□□□□ -0.93
SSRP1-204ENST00000529002 SLC7A5P1Q8MH63 180 aa9.27□□□□□ -0.93
SSRP1-204ENST00000529002 DSCR10P59022 87 aa9.25□□□□□ -0.93
SSRP1-204ENST00000529002 Q6ZQY7 126 aa9.25□□□□□ -0.93
SSRP1-204ENST00000529002 NEBP20929 6669 aa9.25□□□□□ -0.93
SSRP1-204ENST00000529002 RBM12B-AS1Q9P1G2 102 aa9.24□□□□□ -0.93
SSRP1-204ENST00000529002 TRAV13-2A0A0B4J235 113 aa9.22□□□□□ -0.93
SSRP1-204ENST00000529002 H3BUT2 72 aa9.22□□□□□ -0.93
SSRP1-204ENST00000529002 SVBPQ8N300 66 aa9.22□□□□□ -0.93
SSRP1-204ENST00000529002 LINC00575Q6W349 94 aa9.21□□□□□ -0.94
SSRP1-204ENST00000529002 MUSTN1Q8IVN3 82 aa9.21□□□□□ -0.94
SSRP1-204ENST00000529002 SYS1-DBNDD2H3BUS1 97 aa9.2□□□□□ -0.94
SSRP1-204ENST00000529002 SCGB1D4Q6XE38 83 aa9.18□□□□□ -0.94
SSRP1-204ENST00000529002 NOTCH2NLQ7Z3S9 236 aa9.18□□□□□ -0.94
SSRP1-204ENST00000529002 hADV29S1A0JD25 119 aa9.16□□□□□ -0.94
SSRP1-204ENST00000529002 IFITM1P13164 125 aa9.15□□□□□ -0.94
SSRP1-204ENST00000529002 NDUFA5Q16718 116 aa9.15□□□□□ -0.94
SSRP1-204ENST00000529002 LINC01545Q5VT33 79 aa9.15□□□□□ -0.94
SSRP1-204ENST00000529002 Q8N9P0 234 aaPredicted RBP9.15□□□□□ -0.94
SSRP1-204ENST00000529002 KRTAP20-1Q3LI63 56 aa9.13□□□□□ -0.95
SSRP1-204ENST00000529002 VAMP3Q15836 100 aa9.11□□□□□ -0.95
SSRP1-204ENST00000529002 COPS9Q8WXC6 57 aa9.11□□□□□ -0.95
SSRP1-204ENST00000529002 SS18L2Q9UHA2 77 aa9.11□□□□□ -0.95
SSRP1-204ENST00000529002 ANKRD39Q53RE8 183 aa9.1□□□□□ -0.95
SSRP1-204ENST00000529002 SNHG12Q9BXW3 62 aa9.1□□□□□ -0.95
SSRP1-204ENST00000529002 MUC12Q9UKN1 5478 aa9.09□□□□□ -0.95
SSRP1-204ENST00000529002 A0A087WSZ3 146 aa9.08□□□□□ -0.96
SSRP1-204ENST00000529002 Q6ZVH6 145 aa9.07□□□□□ -0.96
SSRP1-204ENST00000529002 PET117Q6UWS5 81 aa9.06□□□□□ -0.96
SSRP1-204ENST00000529002 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.06□□□□□ -0.96
SSRP1-204ENST00000529002 SIGMAR1Q99720 223 aa9.06□□□□□ -0.96
SSRP1-204ENST00000529002 COLCA2A8K830 154 aa9.05□□□□□ -0.96
SSRP1-204ENST00000529002 LINC00313P59037 77 aa9.05□□□□□ -0.96
SSRP1-204ENST00000529002 TEN1Q86WV5 123 aa9.03□□□□□ -0.96
SSRP1-204ENST00000529002 A8MWP4 228 aa9.01□□□□□ -0.97
SSRP1-204ENST00000529002 C3orf79P0CE67 100 aa9.01□□□□□ -0.97
SSRP1-204ENST00000529002 SCGB1D1O95968 90 aa9□□□□□ -0.97
SSRP1-204ENST00000529002 MTURNQ8N3F0 131 aa8.99□□□□□ -0.97
SSRP1-204ENST00000529002 PPDPFLQ8WWR9 84 aa8.99□□□□□ -0.97
SSRP1-204ENST00000529002 ATOH7Q8N100 152 aa8.98□□□□□ -0.97
SSRP1-204ENST00000529002 IGKV4-1P06312 121 aa8.95□□□□□ -0.98
SSRP1-204ENST00000529002 KRTDAPP60985 99 aa8.94□□□□□ -0.98
SSRP1-204ENST00000529002 SMCPP49901 116 aaPredicted RBP8.93□□□□□ -0.98
SSRP1-204ENST00000529002 HIST1H2BKO60814 126 aa8.92□□□□□ -0.98
SSRP1-204ENST00000529002 HIST1H2BJP06899 126 aa8.92□□□□□ -0.98
SSRP1-204ENST00000529002 HIST1H2BOP23527 126 aa8.92□□□□□ -0.98
SSRP1-204ENST00000529002 HIST1H2BBP33778 126 aa8.92□□□□□ -0.98
SSRP1-204ENST00000529002 NDUFV3P56181 108 aaKnown RBP8.92□□□□□ -0.98
SSRP1-204ENST00000529002 HIST1H2BDP58876 126 aa8.92□□□□□ -0.98
SSRP1-204ENST00000529002 HIST1H2BCP62807 126 aa8.92□□□□□ -0.98
SSRP1-204ENST00000529002 HIST2H2BEQ16778 126 aa8.92□□□□□ -0.98
SSRP1-204ENST00000529002 DEFB116Q30KQ4 102 aa8.92□□□□□ -0.98
SSRP1-204ENST00000529002 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.92□□□□□ -0.98
SSRP1-204ENST00000529002 HIST1H2BHQ93079 126 aa8.92□□□□□ -0.98
SSRP1-204ENST00000529002 HIST1H2BNQ99877 126 aa8.92□□□□□ -0.98
SSRP1-204ENST00000529002 HIST1H2BMQ99879 126 aa8.92□□□□□ -0.98
SSRP1-204ENST00000529002 A0A1W2PNM2 257 aa8.91□□□□□ -0.98
SSRP1-204ENST00000529002 SPINK7P58062 85 aa8.9□□□□□ -0.98
SSRP1-204ENST00000529002 C12orf57Q99622 126 aa8.9□□□□□ -0.98
SSRP1-204ENST00000529002 IGHV6-1A0A0B4J1U7 121 aa8.88□□□□□ -0.99
SSRP1-204ENST00000529002 BVES-AS1Q5T3Y7 98 aa8.87□□□□□ -0.99
SSRP1-204ENST00000529002 H3BMG7 143 aa8.86□□□□□ -0.99
SSRP1-204ENST00000529002 ZCCHC13Q8WW36 166 aaKnown RBP8.83□□□□□ -1
SSRP1-204ENST00000529002 FAM218AQ96MZ4 157 aa8.83□□□□□ -1
SSRP1-204ENST00000529002 WFDC13Q8IUB5 93 aa8.82□□□□□ -1
SSRP1-204ENST00000529002 A6NN06 94 aa8.81□□□□□ -1
SSRP1-204ENST00000529002 LINC00472Q9H8W2 130 aa8.79□□□□□ -1
SSRP1-204ENST00000529002 A0A1B0GV72 72 aa8.76□□□□□ -1.01
SSRP1-204ENST00000529002 FABP2P12104 132 aa8.76□□□□□ -1.01
SSRP1-204ENST00000529002 KRTAP5-9P26371 169 aa8.75□□□□□ -1.01
SSRP1-204ENST00000529002 A6NJY4 79 aa8.72□□□□□ -1.01
SSRP1-204ENST00000529002 TRBV7-4A0A0J9YYF1 115 aa8.7□□□□□ -1.02
SSRP1-204ENST00000529002 A0A1B0GVX0 72 aa8.7□□□□□ -1.02
SSRP1-204ENST00000529002 MT1BP07438 61 aa8.7□□□□□ -1.02
SSRP1-204ENST00000529002 KMT2DO14686 5537 aa8.7□□□□□ -1.02
SSRP1-204ENST00000529002 ANKRD29Q8N6D5 301 aa8.69□□□□□ -1.02
SSRP1-204ENST00000529002 C8orf87E5RJ46 101 aa8.68□□□□□ -1.02
SSRP1-204ENST00000529002 SNCGO76070 127 aa8.68□□□□□ -1.02
SSRP1-204ENST00000529002 KRTAP2-3P0C7H8 128 aa8.68□□□□□ -1.02
SSRP1-204ENST00000529002 KRTAP2-4Q9BYR9 128 aa8.68□□□□□ -1.02
SSRP1-204ENST00000529002 GHRHP01286 108 aa8.67□□□□□ -1.02
SSRP1-204ENST00000529002 COA6Q5JTJ3 125 aaKnown RBP8.67□□□□□ -1.02
SSRP1-204ENST00000529002 RAB37Q96AX2 223 aa8.67□□□□□ -1.02
SSRP1-204ENST00000529002 HIST1H4GQ99525 98 aa8.67□□□□□ -1.02
SSRP1-204ENST00000529002 MDN1Q9NU22 5596 aa8.66□□□□□ -1.02
SSRP1-204ENST00000529002 H0YGX0 51 aa8.66□□□□□ -1.02
SSRP1-204ENST00000529002 SNRPEP62304 92 aaKnown RBP8.65□□□□□ -1.02
SSRP1-204ENST00000529002 H1FX-AS1Q4G0G2 97 aa8.63□□□□□ -1.03
SSRP1-204ENST00000529002 TRACP01848 142 aa8.61□□□□□ -1.03
SSRP1-204ENST00000529002 CCKP06307 115 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms