RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 ETDCA0A1B0GVM5 59 aa8.19□□□□□ -1.1
CAPN1-212ENST00000527887 C3orf22Q8N5N4 141 aa8.19□□□□□ -1.1
CAPN1-212ENST00000527887 KRTAP4-16G5E9R7 235 aaPredicted RBP8.18□□□□□ -1.1
CAPN1-212ENST00000527887 C4orf48Q5BLP8 95 aa8.18□□□□□ -1.1
CAPN1-212ENST00000527887 IGLV7-46A0A075B6I9 117 aa8.17□□□□□ -1.1
CAPN1-212ENST00000527887 H3BQ85 93 aa8.17□□□□□ -1.1
CAPN1-212ENST00000527887 SMCR5Q8TEV8 140 aa8.17□□□□□ -1.1
CAPN1-212ENST00000527887 CLEC2BQ92478 149 aa8.17□□□□□ -1.1
CAPN1-212ENST00000527887 RETNLBQ9BQ08 111 aa8.17□□□□□ -1.1
CAPN1-212ENST00000527887 ELOF1P60002 83 aaKnown RBP8.16□□□□□ -1.1
CAPN1-212ENST00000527887 LINC00575Q6W349 94 aa8.16□□□□□ -1.1
CAPN1-212ENST00000527887 CDIP1Q9H305 208 aa8.16□□□□□ -1.1
CAPN1-212ENST00000527887 PRO0461Q9UI25 63 aa8.16□□□□□ -1.1
CAPN1-212ENST00000527887 H3BT86 120 aa8.15□□□□□ -1.1
CAPN1-212ENST00000527887 SLC25A20O43772 301 aa8.15□□□□□ -1.1
CAPN1-212ENST00000527887 GHRHP01286 108 aa8.15□□□□□ -1.1
CAPN1-212ENST00000527887 COX7BP24311 80 aa8.15□□□□□ -1.1
CAPN1-212ENST00000527887 C9JAW5 83 aa8.14□□□□□ -1.11
CAPN1-212ENST00000527887 DNAL4O96015 105 aa8.14□□□□□ -1.11
CAPN1-212ENST00000527887 LINC00483Q53H64 154 aa8.14□□□□□ -1.11
CAPN1-212ENST00000527887 FP248Q71RG6 208 aaPredicted RBP8.14□□□□□ -1.11
CAPN1-212ENST00000527887 FAM218AQ96MZ4 157 aa8.14□□□□□ -1.11
CAPN1-212ENST00000527887 hADV29S1A0JD25 119 aa8.13□□□□□ -1.11
CAPN1-212ENST00000527887 OCIAD2Q56VL3 154 aa8.13□□□□□ -1.11
CAPN1-212ENST00000527887 B5MCH6 92 aa8.12□□□□□ -1.11
CAPN1-212ENST00000527887 SPINK1P00995 79 aa8.12□□□□□ -1.11
CAPN1-212ENST00000527887 ANKRD29Q8N6D5 301 aa8.12□□□□□ -1.11
CAPN1-212ENST00000527887 DHRS4-AS1Q9P1J3 65 aa8.12□□□□□ -1.11
CAPN1-212ENST00000527887 SSBP3-AS1Q7Z2R9 100 aa8.11□□□□□ -1.11
CAPN1-212ENST00000527887 Q8NBF4 154 aa8.11□□□□□ -1.11
CAPN1-212ENST00000527887 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.1□□□□□ -1.11
CAPN1-212ENST00000527887 Q6ZRX8 168 aa8.1□□□□□ -1.11
CAPN1-212ENST00000527887 SMCPP49901 116 aaPredicted RBP8.09□□□□□ -1.11
CAPN1-212ENST00000527887 GAGE2AQ6NT46 116 aa8.09□□□□□ -1.11
CAPN1-212ENST00000527887 ORMDL1Q9P0S3 153 aa8.09□□□□□ -1.11
CAPN1-212ENST00000527887 MUC17Q685J3 4493 aa8.08□□□□□ -1.12
CAPN1-212ENST00000527887 TMEM256-PLSCR3K7ERE1 68 aa8.08□□□□□ -1.12
CAPN1-212ENST00000527887 BAALC-AS2P0C853 105 aa8.08□□□□□ -1.12
CAPN1-212ENST00000527887 RPS29P62273 56 aaKnown RBP8.08□□□□□ -1.12
CAPN1-212ENST00000527887 TEN1Q86WV5 123 aa8.07□□□□□ -1.12
CAPN1-212ENST00000527887 PPDPFLQ8WWR9 84 aa8.07□□□□□ -1.12
CAPN1-212ENST00000527887 Q9BRP9 147 aa8.06□□□□□ -1.12
CAPN1-212ENST00000527887 ERC2-IT1O76042 136 aa8.05□□□□□ -1.12
CAPN1-212ENST00000527887 ETDBQ3ZM63 59 aa8.04□□□□□ -1.12
CAPN1-212ENST00000527887 IGLV9-49A0A0B4J1Y8 123 aa8.03□□□□□ -1.12
CAPN1-212ENST00000527887 MOBPQ13875 183 aa8.03□□□□□ -1.12
CAPN1-212ENST00000527887 Q6ZQY7 126 aa8.03□□□□□ -1.12
CAPN1-212ENST00000527887 MTURNQ8N3F0 131 aa8.03□□□□□ -1.12
CAPN1-212ENST00000527887 FAT4Q6V0I7 4981 aa8.02□□□□□ -1.12
CAPN1-212ENST00000527887 JMJD7-PLA2G4BH0Y9G9 81 aa8.01□□□□□ -1.13
CAPN1-212ENST00000527887 KRTAP13-3Q3SY46 172 aa8.01□□□□□ -1.13
CAPN1-212ENST00000527887 OBSCN-AS1Q96MR7 158 aa8.01□□□□□ -1.13
CAPN1-212ENST00000527887 J3QR89 54 aa8□□□□□ -1.13
CAPN1-212ENST00000527887 IGLV5-48A0A075B6I7 105 aa7.99□□□□□ -1.13
CAPN1-212ENST00000527887 K7ERU9 68 aa7.99□□□□□ -1.13
CAPN1-212ENST00000527887 C21orf62-AS1Q17RA5 79 aa7.99□□□□□ -1.13
CAPN1-212ENST00000527887 LCE2AQ5TA79 106 aaPredicted RBP7.99□□□□□ -1.13
CAPN1-212ENST00000527887 Q8N377 158 aa7.99□□□□□ -1.13
CAPN1-212ENST00000527887 ASB16-AS1Q495Z4 193 aa7.97□□□□□ -1.13
CAPN1-212ENST00000527887 C9orf153Q5TBE3 101 aa7.96□□□□□ -1.14
CAPN1-212ENST00000527887 TEX49A0A1B0GTD5 131 aa7.95□□□□□ -1.14
CAPN1-212ENST00000527887 PDE6GP18545 87 aa7.95□□□□□ -1.14
CAPN1-212ENST00000527887 SPRR1BP22528 89 aa7.95□□□□□ -1.14
CAPN1-212ENST00000527887 LINC01547P58512 204 aaPredicted RBP7.95□□□□□ -1.14
CAPN1-212ENST00000527887 SEC61BP60468 96 aaKnown RBP7.95□□□□□ -1.14
CAPN1-212ENST00000527887 ST20-AS1Q8NBB2 130 aa7.94□□□□□ -1.14
CAPN1-212ENST00000527887 NDUFV3P56181 108 aaKnown RBP7.93□□□□□ -1.14
CAPN1-212ENST00000527887 RBM3P98179 157 aaKnown RBP7.92□□□□□ -1.14
CAPN1-212ENST00000527887 LAMTOR3Q9UHA4 124 aa7.92□□□□□ -1.14
CAPN1-212ENST00000527887 FAM240AA0A1B0GVK7 77 aa7.91□□□□□ -1.14
CAPN1-212ENST00000527887 LIMD2Q9BT23 127 aa7.91□□□□□ -1.14
CAPN1-212ENST00000527887 LOC110117498A0A087WWA1 95 aa7.9□□□□□ -1.14
CAPN1-212ENST00000527887 ACYP1P07311 99 aa7.9□□□□□ -1.14
CAPN1-212ENST00000527887 DSCR8Q96T75 97 aa7.89□□□□□ -1.15
CAPN1-212ENST00000527887 XP32Q5T750 250 aa7.88□□□□□ -1.15
CAPN1-212ENST00000527887 DEFB105AQ8NG35 78 aa7.88□□□□□ -1.15
CAPN1-212ENST00000527887 IGLV8-61A0A075B6I0 122 aa7.87□□□□□ -1.15
CAPN1-212ENST00000527887 TRBV7-4A0A0J9YYF1 115 aa7.86□□□□□ -1.15
CAPN1-212ENST00000527887 A0A1B0GW54 56 aa7.86□□□□□ -1.15
CAPN1-212ENST00000527887 CCKP06307 115 aa7.86□□□□□ -1.15
CAPN1-212ENST00000527887 CD164Q04900 197 aa7.86□□□□□ -1.15
CAPN1-212ENST00000527887 KRTAP9-2Q9BYQ4 174 aa7.86□□□□□ -1.15
CAPN1-212ENST00000527887 SMIM29Q86T20 159 aa7.85□□□□□ -1.15
CAPN1-212ENST00000527887 C14orf132Q9NPU4 83 aa7.85□□□□□ -1.15
CAPN1-212ENST00000527887 F8WEM9 126 aa7.84□□□□□ -1.15
CAPN1-212ENST00000527887 Q6ZQT0 140 aa7.84□□□□□ -1.15
CAPN1-212ENST00000527887 Q5XG85 94 aa7.81□□□□□ -1.16
CAPN1-212ENST00000527887 Q6JHZ5 121 aa7.81□□□□□ -1.16
CAPN1-212ENST00000527887 HRCT1Q6UXD1 115 aa7.81□□□□□ -1.16
CAPN1-212ENST00000527887 KRTAP4-1Q9BYQ7 146 aa7.79□□□□□ -1.16
CAPN1-212ENST00000527887 Q6Q795 121 aa7.75□□□□□ -1.17
CAPN1-212ENST00000527887 A0A1B0GV72 72 aa7.73□□□□□ -1.17
CAPN1-212ENST00000527887 VPS25Q9BRG1 176 aa7.73□□□□□ -1.17
CAPN1-212ENST00000527887 IGFL1Q6UW32 110 aa7.72□□□□□ -1.17
CAPN1-212ENST00000527887 LINC00643Q86TS7 51 aa7.72□□□□□ -1.17
CAPN1-212ENST00000527887 LINC00846Q9NV44 126 aa7.72□□□□□ -1.17
CAPN1-212ENST00000527887 A0A1W2PNM2 257 aa7.71□□□□□ -1.18
CAPN1-212ENST00000527887 C9orf92A6NGG3 77 aa7.71□□□□□ -1.18
CAPN1-212ENST00000527887 C1orf195Q5TG92 126 aa7.71□□□□□ -1.18
CAPN1-212ENST00000527887 UBL5Q9BZL1 73 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms