RNA–Protein interactions for RNA: ENST00000527413.1

SSSCA1-204, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2

Gene SSSCA1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-204ENST00000527413 TCL1BO95988 128 aa7.34□□□□□ -1.23
SSSCA1-204ENST00000527413 COX8AP10176 69 aa7.33□□□□□ -1.24
SSSCA1-204ENST00000527413 BVES-AS1Q5T3Y7 98 aa7.33□□□□□ -1.24
SSSCA1-204ENST00000527413 LCE2CQ5TA81 110 aa7.33□□□□□ -1.24
SSSCA1-204ENST00000527413 Q6JHZ5 121 aa7.33□□□□□ -1.24
SSSCA1-204ENST00000527413 CLEC2BQ92478 149 aa7.33□□□□□ -1.24
SSSCA1-204ENST00000527413 KRTAP19-2Q3LHN2 52 aa7.32□□□□□ -1.24
SSSCA1-204ENST00000527413 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.32□□□□□ -1.24
SSSCA1-204ENST00000527413 IGFL1Q6UW32 110 aa7.31□□□□□ -1.24
SSSCA1-204ENST00000527413 DLEU1O43261 78 aa7.3□□□□□ -1.24
SSSCA1-204ENST00000527413 RPL37P61927 97 aaKnown RBP7.3□□□□□ -1.24
SSSCA1-204ENST00000527413 PPDPFLQ8WWR9 84 aa7.3□□□□□ -1.24
SSSCA1-204ENST00000527413 TRBV7-7A0A0K0K1E9 115 aa7.29□□□□□ -1.24
SSSCA1-204ENST00000527413 OCIAD2Q56VL3 154 aa7.29□□□□□ -1.24
SSSCA1-204ENST00000527413 C14orf144Q96I85 54 aa7.27□□□□□ -1.25
SSSCA1-204ENST00000527413 CFC1BP0CG36 223 aa7.26□□□□□ -1.25
SSSCA1-204ENST00000527413 CFC1P0CG37 223 aa7.26□□□□□ -1.25
SSSCA1-204ENST00000527413 SNHG12Q9BXW3 62 aa7.26□□□□□ -1.25
SSSCA1-204ENST00000527413 HIGD1BQ9P298 99 aa7.26□□□□□ -1.25
SSSCA1-204ENST00000527413 PAM16Q9Y3D7 125 aa7.26□□□□□ -1.25
SSSCA1-204ENST00000527413 MT1HP80294 61 aa7.25□□□□□ -1.25
SSSCA1-204ENST00000527413 SPATA45Q537H7 98 aa7.25□□□□□ -1.25
SSSCA1-204ENST00000527413 RAB37Q96AX2 223 aa7.25□□□□□ -1.25
SSSCA1-204ENST00000527413 A0A0B4J2C4 111 aa7.24□□□□□ -1.25
SSSCA1-204ENST00000527413 KRTAP9-6A0A140TA67 174 aa7.24□□□□□ -1.25
SSSCA1-204ENST00000527413 H3BUT2 72 aa7.24□□□□□ -1.25
SSSCA1-204ENST00000527413 C2orf91Q6ZV80 131 aa7.24□□□□□ -1.25
SSSCA1-204ENST00000527413 VAMP8Q9BV40 100 aa7.23□□□□□ -1.25
SSSCA1-204ENST00000527413 H0YGX0 51 aa7.21□□□□□ -1.26
SSSCA1-204ENST00000527413 LCE2DQ5TA82 110 aaPredicted RBP7.21□□□□□ -1.26
SSSCA1-204ENST00000527413 FAM218AQ96MZ4 157 aa7.21□□□□□ -1.26
SSSCA1-204ENST00000527413 SNCGO76070 127 aa7.2□□□□□ -1.26
SSSCA1-204ENST00000527413 LST1O00453 97 aa7.19□□□□□ -1.26
SSSCA1-204ENST00000527413 Q6Q795 121 aa7.19□□□□□ -1.26
SSSCA1-204ENST00000527413 NDUFV3P56181 108 aaKnown RBP7.18□□□□□ -1.26
SSSCA1-204ENST00000527413 CEND1Q8N111 149 aa7.18□□□□□ -1.26
SSSCA1-204ENST00000527413 OBSCN-AS1Q96MR7 158 aa7.18□□□□□ -1.26
SSSCA1-204ENST00000527413 SS18L2Q9UHA2 77 aa7.18□□□□□ -1.26
SSSCA1-204ENST00000527413 TMEM238LA0A1B0GVL6 79 aa7.17□□□□□ -1.26
SSSCA1-204ENST00000527413 A6NJY4 79 aa7.17□□□□□ -1.26
SSSCA1-204ENST00000527413 COX6B2Q6YFQ2 88 aa7.16□□□□□ -1.26
SSSCA1-204ENST00000527413 Q75L30 129 aa7.16□□□□□ -1.26
SSSCA1-204ENST00000527413 TEN1Q86WV5 123 aa7.16□□□□□ -1.26
SSSCA1-204ENST00000527413 PRO1854Q9UHT4 67 aa7.16□□□□□ -1.26
SSSCA1-204ENST00000527413 A0A1B0GX51 115 aa7.15□□□□□ -1.26
SSSCA1-204ENST00000527413 FXYD2P54710 66 aa7.15□□□□□ -1.26
SSSCA1-204ENST00000527413 FLGP20930 4061 aaPredicted RBP7.13□□□□□ -1.27
SSSCA1-204ENST00000527413 TRIAP1O43715 76 aa7.13□□□□□ -1.27
SSSCA1-204ENST00000527413 GHRHP01286 108 aa7.13□□□□□ -1.27
SSSCA1-204ENST00000527413 ATP11AUNQ6ZP68 121 aa7.13□□□□□ -1.27
SSSCA1-204ENST00000527413 A0A087WSZ3 146 aa7.12□□□□□ -1.27
SSSCA1-204ENST00000527413 H3BMG7 143 aa7.12□□□□□ -1.27
SSSCA1-204ENST00000527413 FABP2P12104 132 aa7.12□□□□□ -1.27
SSSCA1-204ENST00000527413 LORP23490 312 aaPredicted RBP7.12□□□□□ -1.27
SSSCA1-204ENST00000527413 KRTAP10-6P60371 365 aaPredicted RBP7.12□□□□□ -1.27
SSSCA1-204ENST00000527413 Q96NJ1 140 aa7.11□□□□□ -1.27
SSSCA1-204ENST00000527413 M0R2T5 61 aa7.1□□□□□ -1.27
SSSCA1-204ENST00000527413 HSD52Q0P140 79 aa7.09□□□□□ -1.27
SSSCA1-204ENST00000527413 PYY3Q5JQD4 70 aa7.08□□□□□ -1.28
SSSCA1-204ENST00000527413 C20orf166-AS1Q96NR2 134 aa7.08□□□□□ -1.28
SSSCA1-204ENST00000527413 A0A1W2PNM2 257 aa7.07□□□□□ -1.28
SSSCA1-204ENST00000527413 K7ERJ3 54 aa7.07□□□□□ -1.28
SSSCA1-204ENST00000527413 DNAL4O96015 105 aa7.07□□□□□ -1.28
SSSCA1-204ENST00000527413 A8MUU9 505 aa7.06□□□□□ -1.28
SSSCA1-204ENST00000527413 ORMDL1Q9P0S3 153 aa7.06□□□□□ -1.28
SSSCA1-204ENST00000527413 PSMB2P49721 201 aa7.05□□□□□ -1.28
SSSCA1-204ENST00000527413 SIGMAR1Q99720 223 aa7.05□□□□□ -1.28
SSSCA1-204ENST00000527413 CRCT1Q9UGL9 99 aa7.05□□□□□ -1.28
SSSCA1-204ENST00000527413 FSIP2Q5CZC0 6907 aa7.05□□□□□ -1.28
SSSCA1-204ENST00000527413 A0A1B0GV72 72 aa7.03□□□□□ -1.28
SSSCA1-204ENST00000527413 H3BQ85 93 aa7.03□□□□□ -1.28
SSSCA1-204ENST00000527413 DSCR10P59022 87 aa7.03□□□□□ -1.28
SSSCA1-204ENST00000527413 ANKRD29Q8N6D5 301 aa7.03□□□□□ -1.28
SSSCA1-204ENST00000527413 TRBV7-4A0A0J9YYF1 115 aa7.02□□□□□ -1.29
SSSCA1-204ENST00000527413 COX6CP09669 75 aa7.02□□□□□ -1.29
SSSCA1-204ENST00000527413 TMEM256-PLSCR3K7ERE1 68 aa7□□□□□ -1.29
SSSCA1-204ENST00000527413 IGKV4-1P06312 121 aa6.99□□□□□ -1.29
SSSCA1-204ENST00000527413 UQCR10Q9UDW1 63 aa6.99□□□□□ -1.29
SSSCA1-204ENST00000527413 TRACP01848 142 aa6.97□□□□□ -1.29
SSSCA1-204ENST00000527413 CCKP06307 115 aa6.97□□□□□ -1.29
SSSCA1-204ENST00000527413 LINC00313P59037 77 aa6.97□□□□□ -1.29
SSSCA1-204ENST00000527413 TMA7Q9Y2S6 64 aaKnown RBP6.97□□□□□ -1.29
SSSCA1-204ENST00000527413 KRTAP16-1A8MUX0 517 aa6.96□□□□□ -1.3
SSSCA1-204ENST00000527413 UBE2V1Q13404 147 aa6.96□□□□□ -1.3
SSSCA1-204ENST00000527413 TRBV20-1A0A075B6N2 111 aa6.95□□□□□ -1.3
SSSCA1-204ENST00000527413 LINC00472Q9H8W2 130 aa6.95□□□□□ -1.3
SSSCA1-204ENST00000527413 DEFB116Q30KQ4 102 aa6.94□□□□□ -1.3
SSSCA1-204ENST00000527413 SCGB1C2P0DMR2 95 aa6.92□□□□□ -1.3
SSSCA1-204ENST00000527413 NOTCH2NLQ7Z3S9 236 aa6.92□□□□□ -1.3
SSSCA1-204ENST00000527413 IGHV6-1A0A0B4J1U7 121 aa6.91□□□□□ -1.3
SSSCA1-204ENST00000527413 VPS25Q9BRG1 176 aa6.91□□□□□ -1.3
SSSCA1-204ENST00000527413 RBM3P98179 157 aaKnown RBP6.9□□□□□ -1.3
SSSCA1-204ENST00000527413 DSCR8Q96T75 97 aa6.89□□□□□ -1.31
SSSCA1-204ENST00000527413 A0A1B0GVX0 72 aa6.87□□□□□ -1.31
SSSCA1-204ENST00000527413 C8orf87E5RJ46 101 aa6.86□□□□□ -1.31
SSSCA1-204ENST00000527413 FAM236DA0A1B0GTK5 79 aa6.85□□□□□ -1.31
SSSCA1-204ENST00000527413 BAALC-AS2P0C853 105 aa6.85□□□□□ -1.31
SSSCA1-204ENST00000527413 FAM236CP0DP71 79 aa6.85□□□□□ -1.31
SSSCA1-204ENST00000527413 C9JAW5 83 aa6.84□□□□□ -1.31
SSSCA1-204ENST00000527413 HRES1P13985 223 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms