RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 KRTAP4-5Q9BYR2 181 aa9.46□□□□□ -0.9
TSPAN4-213ENST00000524895 PKHD1L1Q86WI1 4243 aa9.46□□□□□ -0.9
TSPAN4-213ENST00000524895 FAM229BQ4G0N7 80 aa9.45□□□□□ -0.9
TSPAN4-213ENST00000524895 C3orf22Q8N5N4 141 aa9.45□□□□□ -0.9
TSPAN4-213ENST00000524895 LAMTOR3Q9UHA4 124 aa9.45□□□□□ -0.9
TSPAN4-213ENST00000524895 F8WEM9 126 aa9.43□□□□□ -0.9
TSPAN4-213ENST00000524895 H3BT86 120 aa9.43□□□□□ -0.9
TSPAN4-213ENST00000524895 CRYGAP11844 174 aa9.42□□□□□ -0.9
TSPAN4-213ENST00000524895 SMIM29Q86T20 159 aa9.42□□□□□ -0.9
TSPAN4-213ENST00000524895 A0A087X002 238 aa9.41□□□□□ -0.9
TSPAN4-213ENST00000524895 IGLV9-49A0A0B4J1Y8 123 aa9.41□□□□□ -0.9
TSPAN4-213ENST00000524895 NDUFV3P56181 108 aaKnown RBP9.41□□□□□ -0.9
TSPAN4-213ENST00000524895 UBE2V1Q13404 147 aa9.41□□□□□ -0.9
TSPAN4-213ENST00000524895 C9orf153Q5TBE3 101 aa9.4□□□□□ -0.9
TSPAN4-213ENST00000524895 ANKRD29Q8N6D5 301 aa9.4□□□□□ -0.9
TSPAN4-213ENST00000524895 PRO0461Q9UI25 63 aa9.39□□□□□ -0.91
TSPAN4-213ENST00000524895 A0A1B0GV72 72 aa9.38□□□□□ -0.91
TSPAN4-213ENST00000524895 MOBPQ13875 183 aa9.38□□□□□ -0.91
TSPAN4-213ENST00000524895 PRR26Q8N8Z3 221 aa9.38□□□□□ -0.91
TSPAN4-213ENST00000524895 KRTAP13-2Q52LG2 175 aa9.37□□□□□ -0.91
TSPAN4-213ENST00000524895 Q8NBF4 154 aa9.37□□□□□ -0.91
TSPAN4-213ENST00000524895 F8W1H4 67 aa9.36□□□□□ -0.91
TSPAN4-213ENST00000524895 SMCPP49901 116 aaPredicted RBP9.36□□□□□ -0.91
TSPAN4-213ENST00000524895 LINC01600Q96MT4 127 aa9.36□□□□□ -0.91
TSPAN4-213ENST00000524895 TYMSOSQ8TAI1 123 aa9.34□□□□□ -0.91
TSPAN4-213ENST00000524895 IGLV8-61A0A075B6I0 122 aa9.32□□□□□ -0.92
TSPAN4-213ENST00000524895 JMJD7-PLA2G4BH0Y9G9 81 aa9.32□□□□□ -0.92
TSPAN4-213ENST00000524895 ABCA13Q86UQ4 5058 aa9.31□□□□□ -0.92
TSPAN4-213ENST00000524895 OXTP01178 125 aa9.31□□□□□ -0.92
TSPAN4-213ENST00000524895 RBM3P98179 157 aaKnown RBP9.31□□□□□ -0.92
TSPAN4-213ENST00000524895 Q6JHZ5 121 aa9.31□□□□□ -0.92
TSPAN4-213ENST00000524895 SSBP3-AS1Q7Z2R9 100 aa9.31□□□□□ -0.92
TSPAN4-213ENST00000524895 FLG2Q5D862 2391 aaPredicted RBP9.29□□□□□ -0.92
TSPAN4-213ENST00000524895 DSCR8Q96T75 97 aa9.29□□□□□ -0.92
TSPAN4-213ENST00000524895 IGFL1Q6UW32 110 aa9.28□□□□□ -0.92
TSPAN4-213ENST00000524895 OBSCN-AS1Q96MR7 158 aa9.28□□□□□ -0.92
TSPAN4-213ENST00000524895 MYCBP2O75592 4640 aa9.27□□□□□ -0.93
TSPAN4-213ENST00000524895 TEN1Q86WV5 123 aa9.27□□□□□ -0.93
TSPAN4-213ENST00000524895 FAT3Q8TDW7 4589 aa9.26□□□□□ -0.93
TSPAN4-213ENST00000524895 LRP1Q07954 4544 aaKnown RBP9.26□□□□□ -0.93
TSPAN4-213ENST00000524895 A0A0G2JQZ4 141 aa9.26□□□□□ -0.93
TSPAN4-213ENST00000524895 KRTAP10-8P60410 259 aa9.26□□□□□ -0.93
TSPAN4-213ENST00000524895 ETDBQ3ZM63 59 aa9.26□□□□□ -0.93
TSPAN4-213ENST00000524895 C14orf132Q9NPU4 83 aa9.26□□□□□ -0.93
TSPAN4-213ENST00000524895 TRBV7-4A0A0J9YYF1 115 aa9.25□□□□□ -0.93
TSPAN4-213ENST00000524895 KRTAP29-1A8MX34 341 aaPredicted RBP9.25□□□□□ -0.93
TSPAN4-213ENST00000524895 LINC00304Q8N9R0 145 aa9.24□□□□□ -0.93
TSPAN4-213ENST00000524895 C4orf48Q5BLP8 95 aa9.23□□□□□ -0.93
TSPAN4-213ENST00000524895 LOC110117498A0A087WWA1 95 aa9.22□□□□□ -0.93
TSPAN4-213ENST00000524895 MT1HL1P0DM35 61 aa9.22□□□□□ -0.93
TSPAN4-213ENST00000524895 PDE6GP18545 87 aa9.22□□□□□ -0.93
TSPAN4-213ENST00000524895 HRCT1Q6UXD1 115 aa9.22□□□□□ -0.93
TSPAN4-213ENST00000524895 CCKP06307 115 aa9.21□□□□□ -0.94
TSPAN4-213ENST00000524895 VPS25Q9BRG1 176 aa9.21□□□□□ -0.94
TSPAN4-213ENST00000524895 Q6ZQT0 140 aa9.2□□□□□ -0.94
TSPAN4-213ENST00000524895 J3QL48 77 aa9.19□□□□□ -0.94
TSPAN4-213ENST00000524895 CD164Q04900 197 aa9.19□□□□□ -0.94
TSPAN4-213ENST00000524895 SPAG11AQ6PDA7 123 aa9.19□□□□□ -0.94
TSPAN4-213ENST00000524895 A0A1W2PNM2 257 aa9.18□□□□□ -0.94
TSPAN4-213ENST00000524895 C21orf62-AS1Q17RA5 79 aa9.18□□□□□ -0.94
TSPAN4-213ENST00000524895 Q6Q795 121 aa9.17□□□□□ -0.94
TSPAN4-213ENST00000524895 TRBV7-7A0A0K0K1E9 115 aa9.16□□□□□ -0.94
TSPAN4-213ENST00000524895 SPINK1P00995 79 aa9.16□□□□□ -0.94
TSPAN4-213ENST00000524895 TNXBP22105 4242 aa9.16□□□□□ -0.94
TSPAN4-213ENST00000524895 LIMD2Q9BT23 127 aa9.13□□□□□ -0.95
TSPAN4-213ENST00000524895 A0A087WSZ3 146 aa9.12□□□□□ -0.95
TSPAN4-213ENST00000524895 RPS29P62273 56 aaKnown RBP9.12□□□□□ -0.95
TSPAN4-213ENST00000524895 PCLOQ9Y6V0 5065 aa9.11□□□□□ -0.95
TSPAN4-213ENST00000524895 A0A1B0GW54 56 aa9.1□□□□□ -0.95
TSPAN4-213ENST00000524895 SS18L2Q9UHA2 77 aa9.1□□□□□ -0.95
TSPAN4-213ENST00000524895 Q5XG85 94 aa9.06□□□□□ -0.96
TSPAN4-213ENST00000524895 J3QR89 54 aa9.03□□□□□ -0.96
TSPAN4-213ENST00000524895 DMBT1Q9UGM3 2413 aaPredicted RBP9.03□□□□□ -0.96
TSPAN4-213ENST00000524895 ASB16-AS1Q495Z4 193 aa9.02□□□□□ -0.97
TSPAN4-213ENST00000524895 FAM240AA0A1B0GVK7 77 aa9□□□□□ -0.97
TSPAN4-213ENST00000524895 ACYP1P07311 99 aa9□□□□□ -0.97
TSPAN4-213ENST00000524895 NREPQ16612 68 aa8.99□□□□□ -0.97
TSPAN4-213ENST00000524895 RETNLBQ9BQ08 111 aa8.99□□□□□ -0.97
TSPAN4-213ENST00000524895 LINC00846Q9NV44 126 aa8.99□□□□□ -0.97
TSPAN4-213ENST00000524895 C1orf195Q5TG92 126 aa8.98□□□□□ -0.97
TSPAN4-213ENST00000524895 UBL5Q9BZL1 73 aa8.98□□□□□ -0.97
TSPAN4-213ENST00000524895 Q6ZVQ6 151 aa8.96□□□□□ -0.98
TSPAN4-213ENST00000524895 K7ERU9 68 aa8.95□□□□□ -0.98
TSPAN4-213ENST00000524895 Q96NJ1 140 aa8.95□□□□□ -0.98
TSPAN4-213ENST00000524895 LINC00472Q9H8W2 130 aa8.95□□□□□ -0.98
TSPAN4-213ENST00000524895 DEFB116Q30KQ4 102 aa8.93□□□□□ -0.98
TSPAN4-213ENST00000524895 SIGMAR1Q99720 223 aa8.93□□□□□ -0.98
TSPAN4-213ENST00000524895 IGKV4-1P06312 121 aa8.92□□□□□ -0.98
TSPAN4-213ENST00000524895 FP248Q71RG6 208 aaPredicted RBP8.91□□□□□ -0.98
TSPAN4-213ENST00000524895 J3KT08 172 aa8.9□□□□□ -0.98
TSPAN4-213ENST00000524895 PRR4Q16378 134 aa8.9□□□□□ -0.98
TSPAN4-213ENST00000524895 BPY2O14599 106 aa8.89□□□□□ -0.99
TSPAN4-213ENST00000524895 IGLV7-46A0A075B6I9 117 aa8.86□□□□□ -0.99
TSPAN4-213ENST00000524895 A8MWP4 228 aa8.83□□□□□ -1
TSPAN4-213ENST00000524895 NDUFB1O75438 58 aa8.83□□□□□ -1
TSPAN4-213ENST00000524895 LINC00643Q86TS7 51 aa8.82□□□□□ -1
TSPAN4-213ENST00000524895 DSCR10P59022 87 aa8.81□□□□□ -1
TSPAN4-213ENST00000524895 CXCL6P80162 114 aa8.81□□□□□ -1
TSPAN4-213ENST00000524895 ATP5EP2Q5VTU8 51 aa8.81□□□□□ -1
TSPAN4-213ENST00000524895 CDIP1Q9H305 208 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms