RNA–Protein interactions for RNA: ENST00000524115.2

NKX6-3-202, Transcript of NK6 homeobox 3, humanhuman

TSL 2 BASIC

Gene NKX6-3, Length 1,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-202ENST00000524115 A0A1W2PNM2 257 aa14.22□□□□□ -0.13
NKX6-3-202ENST00000524115 NDUFC1O43677 76 aa14.2□□□□□ -0.14
NKX6-3-202ENST00000524115 DNAH2Q9P225 4427 aa14.18□□□□□ -0.14
NKX6-3-202ENST00000524115 H0Y9J4 135 aa14.17□□□□□ -0.14
NKX6-3-202ENST00000524115 Q6ZR54 194 aa14.17□□□□□ -0.14
NKX6-3-202ENST00000524115 DPH3Q96FX2 82 aa14.17□□□□□ -0.14
NKX6-3-202ENST00000524115 LINC00474Q9P2X8 69 aa14.17□□□□□ -0.14
NKX6-3-202ENST00000524115 IGKV2-24A0A0C4DH68 120 aa14.17□□□□□ -0.14
NKX6-3-202ENST00000524115 LINC00336Q6ZUF6 198 aa14.16□□□□□ -0.14
NKX6-3-202ENST00000524115 IGLV8-61A0A075B6I0 122 aa14.15□□□□□ -0.14
NKX6-3-202ENST00000524115 A0A1W2PNN7 141 aa14.15□□□□□ -0.14
NKX6-3-202ENST00000524115 SMIM29Q86T20 159 aa14.15□□□□□ -0.14
NKX6-3-202ENST00000524115 RTL8CO15255 209 aa14.14□□□□□ -0.15
NKX6-3-202ENST00000524115 C9orf163Q8N9P6 203 aa14.14□□□□□ -0.15
NKX6-3-202ENST00000524115 HECTD4Q9Y4D8 3996 aa14.13□□□□□ -0.15
NKX6-3-202ENST00000524115 FAT2Q9NYQ8 4349 aa14.12□□□□□ -0.15
NKX6-3-202ENST00000524115 NBDYA0A0U1RRE5 68 aa14.11□□□□□ -0.15
NKX6-3-202ENST00000524115 FAM236DA0A1B0GTK5 79 aa14.1□□□□□ -0.15
NKX6-3-202ENST00000524115 FAM236CP0DP71 79 aa14.1□□□□□ -0.15
NKX6-3-202ENST00000524115 DNAH17Q9UFH2 4485 aa14.1□□□□□ -0.15
NKX6-3-202ENST00000524115 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.08□□□□□ -0.16
NKX6-3-202ENST00000524115 H7BZZ5 65 aa14.08□□□□□ -0.16
NKX6-3-202ENST00000524115 SPRR1BP22528 89 aa14.07□□□□□ -0.16
NKX6-3-202ENST00000524115 C1orf134Q5TEV5 83 aa14.07□□□□□ -0.16
NKX6-3-202ENST00000524115 Q8N9L7 120 aa14.07□□□□□ -0.16
NKX6-3-202ENST00000524115 LRCOL1A6NCL2 159 aa14.07□□□□□ -0.16
NKX6-3-202ENST00000524115 ATP5EP56381 51 aaPredicted RBP14.07□□□□□ -0.16
NKX6-3-202ENST00000524115 A0A1B0GVY2 172 aa14.06□□□□□ -0.16
NKX6-3-202ENST00000524115 PRLHP81277 87 aa14.06□□□□□ -0.16
NKX6-3-202ENST00000524115 HIGD2AQ9BW72 106 aa14.05□□□□□ -0.16
NKX6-3-202ENST00000524115 OCR1Q9BZK8 76 aa14.05□□□□□ -0.16
NKX6-3-202ENST00000524115 UBE2AP49459 152 aa14.04□□□□□ -0.16
NKX6-3-202ENST00000524115 IGFL1Q6UW32 110 aa14.04□□□□□ -0.16
NKX6-3-202ENST00000524115 SVIPQ8NHG7 77 aa14.04□□□□□ -0.16
NKX6-3-202ENST00000524115 TMEM254Q8TBM7 123 aa14.03□□□□□ -0.16
NKX6-3-202ENST00000524115 PHF5AQ7RTV0 110 aaKnown RBP14.01□□□□□ -0.17
NKX6-3-202ENST00000524115 SNURFQ9Y675 71 aa14□□□□□ -0.17
NKX6-3-202ENST00000524115 SERP1Q9Y6X1 66 aa14□□□□□ -0.17
NKX6-3-202ENST00000524115 EPM2AB3EWF7 344 aa13.99□□□□□ -0.17
NKX6-3-202ENST00000524115 Q6ZRN7 208 aaPredicted RBP13.99□□□□□ -0.17
NKX6-3-202ENST00000524115 DSCR10P59022 87 aa13.98□□□□□ -0.17
NKX6-3-202ENST00000524115 CHTF8P0CG12 524 aa13.97□□□□□ -0.17
NKX6-3-202ENST00000524115 PKD1P98161 4303 aa13.96□□□□□ -0.18
NKX6-3-202ENST00000524115 PKHD1P08F94 4074 aa13.95□□□□□ -0.18
NKX6-3-202ENST00000524115 A0A0U1RQV1 116 aa13.95□□□□□ -0.18
NKX6-3-202ENST00000524115 DNAH11Q96DT5 4516 aa13.93□□□□□ -0.18
NKX6-3-202ENST00000524115 HERC2O95714 4834 aa13.91□□□□□ -0.18
NKX6-3-202ENST00000524115 HCG22E2RYF7 251 aa13.9□□□□□ -0.18
NKX6-3-202ENST00000524115 KIAA1109Q2LD37 5005 aa13.89□□□□□ -0.19
NKX6-3-202ENST00000524115 K7EQZ3 153 aa13.89□□□□□ -0.19
NKX6-3-202ENST00000524115 DYNC1H1Q14204 4646 aaKnown RBP13.89□□□□□ -0.19
NKX6-3-202ENST00000524115 A0A087WSZ3 146 aa13.88□□□□□ -0.19
NKX6-3-202ENST00000524115 KRTAP11-1Q8IUC1 163 aa13.88□□□□□ -0.19
NKX6-3-202ENST00000524115 SPACA4Q8TDM5 124 aa13.87□□□□□ -0.19
NKX6-3-202ENST00000524115 KRTAP13-1Q8IUC0 172 aa13.86□□□□□ -0.19
NKX6-3-202ENST00000524115 C5orf47Q569G3 176 aa13.85□□□□□ -0.19
NKX6-3-202ENST00000524115 FAM30AQ9NZY2 134 aa13.85□□□□□ -0.19
NKX6-3-202ENST00000524115 RPL37AP61513 92 aaKnown RBP13.84□□□□□ -0.19
NKX6-3-202ENST00000524115 A0A087WTM6 91 aa13.83□□□□□ -0.2
NKX6-3-202ENST00000524115 OXTP01178 125 aa13.83□□□□□ -0.2
NKX6-3-202ENST00000524115 ZNF706Q9Y5V0 76 aaPredicted RBP13.81□□□□□ -0.2
NKX6-3-202ENST00000524115 A0A0G2JQZ4 141 aa13.77□□□□□ -0.21
NKX6-3-202ENST00000524115 SMIM26A0A096LP01 95 aa13.75□□□□□ -0.21
NKX6-3-202ENST00000524115 PANO1I0J062 215 aa13.75□□□□□ -0.21
NKX6-3-202ENST00000524115 A8MWP4 228 aa13.74□□□□□ -0.21
NKX6-3-202ENST00000524115 KRTAP10-2P60368 255 aa13.74□□□□□ -0.21
NKX6-3-202ENST00000524115 LINC00472Q9H8W2 130 aa13.74□□□□□ -0.21
NKX6-3-202ENST00000524115 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.74□□□□□ -0.21
NKX6-3-202ENST00000524115 LINC00483Q53H64 154 aa13.73□□□□□ -0.21
NKX6-3-202ENST00000524115 PRR15Q8IV56 129 aa13.73□□□□□ -0.21
NKX6-3-202ENST00000524115 LRP1BQ9NZR2 4599 aa13.73□□□□□ -0.21
NKX6-3-202ENST00000524115 ZCCHC13Q8WW36 166 aaKnown RBP13.71□□□□□ -0.21
NKX6-3-202ENST00000524115 PLAC8Q9NZF1 115 aa13.69□□□□□ -0.22
NKX6-3-202ENST00000524115 NDUFB1O75438 58 aa13.69□□□□□ -0.22
NKX6-3-202ENST00000524115 MP68P56378 58 aa13.69□□□□□ -0.22
NKX6-3-202ENST00000524115 DEFB116Q30KQ4 102 aa13.69□□□□□ -0.22
NKX6-3-202ENST00000524115 Q5XG85 94 aa13.69□□□□□ -0.22
NKX6-3-202ENST00000524115 RYR1P21817 5038 aa13.69□□□□□ -0.22
NKX6-3-202ENST00000524115 KRTAP29-1A8MX34 341 aaPredicted RBP13.68□□□□□ -0.22
NKX6-3-202ENST00000524115 H3BPC8 53 aa13.68□□□□□ -0.22
NKX6-3-202ENST00000524115 CASC2Q6XLA1 102 aa13.66□□□□□ -0.22
NKX6-3-202ENST00000524115 WFDC13Q8IUB5 93 aa13.66□□□□□ -0.22
NKX6-3-202ENST00000524115 IGLV5-52A0A0A0MRZ9 124 aa13.65□□□□□ -0.22
NKX6-3-202ENST00000524115 CDK2AP2O75956 126 aa13.65□□□□□ -0.22
NKX6-3-202ENST00000524115 DNAH5Q8TE73 4624 aa13.64□□□□□ -0.23
NKX6-3-202ENST00000524115 KRTAP17-1Q9BYP8 105 aa13.63□□□□□ -0.23
NKX6-3-202ENST00000524115 HSPG2P98160 4391 aa13.62□□□□□ -0.23
NKX6-3-202ENST00000524115 ZNF861PO60384 105 aa13.6□□□□□ -0.23
NKX6-3-202ENST00000524115 PSORS1C2Q9UIG4 136 aa13.59□□□□□ -0.23
NKX6-3-202ENST00000524115 IGLV9-49A0A0B4J1Y8 123 aa13.58□□□□□ -0.24
NKX6-3-202ENST00000524115 APOBP04114 4563 aaKnown RBP13.58□□□□□ -0.24
NKX6-3-202ENST00000524115 PCLOQ9Y6V0 5065 aa13.57□□□□□ -0.24
NKX6-3-202ENST00000524115 C4orf26Q17RF5 130 aa13.56□□□□□ -0.24
NKX6-3-202ENST00000524115 hDV103S1A0JD37 113 aa13.56□□□□□ -0.24
NKX6-3-202ENST00000524115 KRTAP4-5Q9BYR2 181 aa13.54□□□□□ -0.24
NKX6-3-202ENST00000524115 CYP4F30PQ9H0H9 118 aa13.53□□□□□ -0.24
NKX6-3-202ENST00000524115 MOBPQ13875 183 aa13.53□□□□□ -0.24
NKX6-3-202ENST00000524115 MMP24-AS1A0A0U1RRL7 71 aa13.5□□□□□ -0.25
NKX6-3-202ENST00000524115 KRTAP10-1P60331 282 aa13.5□□□□□ -0.25
NKX6-3-202ENST00000524115 TRAV22A0A0B4J277 110 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms