RNA–Protein interactions for RNA: ENST00000523867.5

HDAC9-227, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best)

Gene HDAC9, Length 2,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-227ENST00000523867 LINC00208Q96KT6 92 aa4.82□□□□□ -1.64
HDAC9-227ENST00000523867 KLK12Q9UKR0 248 aa4.82□□□□□ -1.64
HDAC9-227ENST00000523867 LELP1Q5T871 98 aa4.81□□□□□ -1.64
HDAC9-227ENST00000523867 TENM1Q9UKZ4 2725 aa4.81□□□□□ -1.64
HDAC9-227ENST00000523867 PRB2P02812 416 aaPredicted RBP4.81□□□□□ -1.64
HDAC9-227ENST00000523867 ANK2Q01484 3957 aa4.8□□□□□ -1.64
HDAC9-227ENST00000523867 H3BPC8 53 aa4.8□□□□□ -1.64
HDAC9-227ENST00000523867 XAGE1AQ9HD64 81 aa4.8□□□□□ -1.64
HDAC9-227ENST00000523867 PRR34Q9NV39 138 aa4.8□□□□□ -1.64
HDAC9-227ENST00000523867 FBN1P35555 2871 aaKnown RBP4.8□□□□□ -1.64
HDAC9-227ENST00000523867 ATRQ13535 2644 aa4.8□□□□□ -1.64
HDAC9-227ENST00000523867 GVQW2A0A096LPI5 108 aaPredicted RBP4.79□□□□□ -1.64
HDAC9-227ENST00000523867 KRTAP16-1A8MUX0 517 aa4.79□□□□□ -1.64
HDAC9-227ENST00000523867 SPART-AS1P0CW21 52 aa4.79□□□□□ -1.64
HDAC9-227ENST00000523867 C6orf48Q9UBA6 75 aa4.79□□□□□ -1.64
HDAC9-227ENST00000523867 MOBPQ13875 183 aa4.79□□□□□ -1.64
HDAC9-227ENST00000523867 ASB16-AS1Q495Z4 193 aa4.79□□□□□ -1.64
HDAC9-227ENST00000523867 Q8NAQ8 132 aa4.79□□□□□ -1.64
HDAC9-227ENST00000523867 KCNQ1DNQ9H478 68 aa4.79□□□□□ -1.64
HDAC9-227ENST00000523867 CHTF8P0CG12 524 aa4.78□□□□□ -1.64
HDAC9-227ENST00000523867 ANK3Q12955 4377 aaKnown RBP4.78□□□□□ -1.64
HDAC9-227ENST00000523867 A0A087X002 238 aa4.78□□□□□ -1.64
HDAC9-227ENST00000523867 PRR4Q16378 134 aa4.77□□□□□ -1.65
HDAC9-227ENST00000523867 RPL37AP8A6NKH3 93 aa4.76□□□□□ -1.65
HDAC9-227ENST00000523867 CAMK2N2Q96S95 79 aa4.76□□□□□ -1.65
HDAC9-227ENST00000523867 COL6A5A8TX70 2615 aa4.76□□□□□ -1.65
HDAC9-227ENST00000523867 C3orf84H3BNL1 204 aa4.76□□□□□ -1.65
HDAC9-227ENST00000523867 ST20-AS1Q8NBB2 130 aa4.76□□□□□ -1.65
HDAC9-227ENST00000523867 TRRAPQ9Y4A5 3859 aa4.75□□□□□ -1.65
HDAC9-227ENST00000523867 IGLV5-48A0A075B6I7 105 aa4.75□□□□□ -1.65
HDAC9-227ENST00000523867 RETNLBQ9BQ08 111 aa4.75□□□□□ -1.65
HDAC9-227ENST00000523867 LINC01558Q9Y6Z2 57 aa4.75□□□□□ -1.65
HDAC9-227ENST00000523867 PLAC8Q9NZF1 115 aa4.75□□□□□ -1.65
HDAC9-227ENST00000523867 EGFEM1PQ0D2K5 195 aa4.74□□□□□ -1.65
HDAC9-227ENST00000523867 WFDC10BQ8IUB3 73 aa4.73□□□□□ -1.65
HDAC9-227ENST00000523867 STAB1Q9NY15 2570 aa4.73□□□□□ -1.65
HDAC9-227ENST00000523867 IGLV5-52A0A0A0MRZ9 124 aa4.73□□□□□ -1.65
HDAC9-227ENST00000523867 DSCR10P59022 87 aa4.73□□□□□ -1.65
HDAC9-227ENST00000523867 CASC2Q6XLA1 102 aa4.73□□□□□ -1.65
HDAC9-227ENST00000523867 KPRPQ5T749 579 aaPredicted RBP4.72□□□□□ -1.65
HDAC9-227ENST00000523867 CNBPP62633 177 aaKnown RBP4.72□□□□□ -1.65
HDAC9-227ENST00000523867 SPRR4Q96PI1 79 aa4.71□□□□□ -1.66
HDAC9-227ENST00000523867 KRTAP26-1Q6PEX3 210 aa4.71□□□□□ -1.66
HDAC9-227ENST00000523867 C15orf56Q8N910 161 aa4.71□□□□□ -1.66
HDAC9-227ENST00000523867 COA5Q86WW8 74 aa4.7□□□□□ -1.66
HDAC9-227ENST00000523867 C9orf163Q8N9P6 203 aa4.7□□□□□ -1.66
HDAC9-227ENST00000523867 IGLV7-46A0A075B6I9 117 aa4.69□□□□□ -1.66
HDAC9-227ENST00000523867 H3BNG1 76 aa4.69□□□□□ -1.66
HDAC9-227ENST00000523867 K7EQZ3 153 aa4.69□□□□□ -1.66
HDAC9-227ENST00000523867 Q8NBF4 154 aa4.69□□□□□ -1.66
HDAC9-227ENST00000523867 IGKV2D-24A0A075B6R9 120 aa4.68□□□□□ -1.66
HDAC9-227ENST00000523867 A0A1W2PNM2 257 aa4.68□□□□□ -1.66
HDAC9-227ENST00000523867 DEFB105AQ8NG35 78 aa4.68□□□□□ -1.66
HDAC9-227ENST00000523867 PKD1L1Q8TDX9 2849 aa4.68□□□□□ -1.66
HDAC9-227ENST00000523867 H0Y9P7 68 aa4.67□□□□□ -1.66
HDAC9-227ENST00000523867 Q8N377 158 aa4.67□□□□□ -1.66
HDAC9-227ENST00000523867 C8orf17Q9NRJ1 99 aa4.67□□□□□ -1.66
HDAC9-227ENST00000523867 LINC00476Q8WZB0 136 aa4.66□□□□□ -1.66
HDAC9-227ENST00000523867 DHRS4-AS1Q9P1J3 65 aa4.66□□□□□ -1.66
HDAC9-227ENST00000523867 C7orf33Q8WU49 177 aa4.66□□□□□ -1.66
HDAC9-227ENST00000523867 LINC01556Q5JQF7 62 aa4.65□□□□□ -1.66
HDAC9-227ENST00000523867 C1orf134Q5TEV5 83 aa4.65□□□□□ -1.66
HDAC9-227ENST00000523867 C1orf137Q5JT78 98 aa4.65□□□□□ -1.67
HDAC9-227ENST00000523867 KRTAP29-1A8MX34 341 aaPredicted RBP4.64□□□□□ -1.67
HDAC9-227ENST00000523867 LUZP6Q538Z0 58 aa4.64□□□□□ -1.67
HDAC9-227ENST00000523867 SPINK7P58062 85 aa4.64□□□□□ -1.67
HDAC9-227ENST00000523867 DEFB116Q30KQ4 102 aa4.64□□□□□ -1.67
HDAC9-227ENST00000523867 DEFB131BA0A096LNP1 70 aa4.63□□□□□ -1.67
HDAC9-227ENST00000523867 NBEAL1Q6ZS30 2694 aa4.63□□□□□ -1.67
HDAC9-227ENST00000523867 NOTCH1P46531 2555 aa4.63□□□□□ -1.67
HDAC9-227ENST00000523867 Q6ZRX8 168 aa4.63□□□□□ -1.67
HDAC9-227ENST00000523867 KRTAP4-16G5E9R7 235 aaPredicted RBP4.62□□□□□ -1.67
HDAC9-227ENST00000523867 MEGF8Q7Z7M0 2845 aa4.62□□□□□ -1.67
HDAC9-227ENST00000523867 TLX1NBP0CAT3 122 aa4.61□□□□□ -1.67
HDAC9-227ENST00000523867 KRTAP10-11P60412 298 aa4.61□□□□□ -1.67
HDAC9-227ENST00000523867 SPAG11AQ6PDA7 123 aa4.61□□□□□ -1.67
HDAC9-227ENST00000523867 IGLV1-50A0A075B6I6 118 aa4.61□□□□□ -1.67
HDAC9-227ENST00000523867 FAM168BA1KXE4 195 aa4.61□□□□□ -1.67
HDAC9-227ENST00000523867 ROMO1P60602 79 aa4.61□□□□□ -1.67
HDAC9-227ENST00000523867 A8MWP4 228 aa4.6□□□□□ -1.67
HDAC9-227ENST00000523867 RTL8CO15255 209 aa4.6□□□□□ -1.67
HDAC9-227ENST00000523867 DNAH10OSP0CZ25 163 aa4.6□□□□□ -1.67
HDAC9-227ENST00000523867 LORP23490 312 aaPredicted RBP4.6□□□□□ -1.67
HDAC9-227ENST00000523867 WFDC13Q8IUB5 93 aa4.6□□□□□ -1.67
HDAC9-227ENST00000523867 TENM3Q9P273 2699 aa4.6□□□□□ -1.67
HDAC9-227ENST00000523867 IGLV5-37A0A075B6J1 123 aa4.59□□□□□ -1.67
HDAC9-227ENST00000523867 SPRR1AP35321 89 aa4.59□□□□□ -1.67
HDAC9-227ENST00000523867 CASC10Q5T4H9 136 aa4.58□□□□□ -1.68
HDAC9-227ENST00000523867 KRTAP7-1Q8IUC3 87 aa4.57□□□□□ -1.68
HDAC9-227ENST00000523867 A0A0G2JQZ4 141 aa4.56□□□□□ -1.68
HDAC9-227ENST00000523867 A0A1W2PNN7 141 aa4.56□□□□□ -1.68
HDAC9-227ENST00000523867 TP53AIP1Q9HCN2 124 aa4.55□□□□□ -1.68
HDAC9-227ENST00000523867 SPATA8Q6RVD6 105 aa4.54□□□□□ -1.68
HDAC9-227ENST00000523867 HRES1P13985 223 aa4.54□□□□□ -1.68
HDAC9-227ENST00000523867 IGLV8-61A0A075B6I0 122 aa4.53□□□□□ -1.68
HDAC9-227ENST00000523867 RPL37AP61513 92 aaKnown RBP4.53□□□□□ -1.68
HDAC9-227ENST00000523867 KRTAP23-1A1A580 65 aa4.52□□□□□ -1.69
HDAC9-227ENST00000523867 IGFL1Q6UW32 110 aa4.52□□□□□ -1.69
HDAC9-227ENST00000523867 P0C880 135 aa4.52□□□□□ -1.69
HDAC9-227ENST00000523867 Q6ZR54 194 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms