RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 SRRM2Q9UQ35 2752 aaKnown RBP12.69□□□□□ -0.38
SQLE-206ENST00000523430 PKHD1P08F94 4074 aa12.68□□□□□ -0.38
SQLE-206ENST00000523430 F8WEM9 126 aa12.68□□□□□ -0.38
SQLE-206ENST00000523430 LINC00336Q6ZUF6 198 aa12.68□□□□□ -0.38
SQLE-206ENST00000523430 TRBV7-7A0A0K0K1E9 115 aa12.65□□□□□ -0.38
SQLE-206ENST00000523430 LRP1BQ9NZR2 4599 aa12.65□□□□□ -0.38
SQLE-206ENST00000523430 UBL5Q9BZL1 73 aa12.65□□□□□ -0.38
SQLE-206ENST00000523430 A0A0G2JQZ4 141 aa12.64□□□□□ -0.39
SQLE-206ENST00000523430 A0A1W2PNM2 257 aa12.64□□□□□ -0.39
SQLE-206ENST00000523430 ZNF861PO60384 105 aa12.64□□□□□ -0.39
SQLE-206ENST00000523430 Q6JHZ5 121 aa12.64□□□□□ -0.39
SQLE-206ENST00000523430 IGKV3D-7A0A0C4DH55 119 aa12.63□□□□□ -0.39
SQLE-206ENST00000523430 SCGB1A1P11684 91 aa12.63□□□□□ -0.39
SQLE-206ENST00000523430 C21orf62-AS1Q17RA5 79 aa12.63□□□□□ -0.39
SQLE-206ENST00000523430 SPRR4Q96PI1 79 aa12.63□□□□□ -0.39
SQLE-206ENST00000523430 Q6ZVQ6 151 aa12.62□□□□□ -0.39
SQLE-206ENST00000523430 IGLV7-43P04211 117 aa12.61□□□□□ -0.39
SQLE-206ENST00000523430 IGFL1Q6UW32 110 aa12.61□□□□□ -0.39
SQLE-206ENST00000523430 IGLV8-61A0A075B6I0 122 aa12.61□□□□□ -0.39
SQLE-206ENST00000523430 A0A1B0GVY2 172 aa12.61□□□□□ -0.39
SQLE-206ENST00000523430 PCP4P48539 62 aa12.61□□□□□ -0.39
SQLE-206ENST00000523430 Q8NBF4 154 aa12.61□□□□□ -0.39
SQLE-206ENST00000523430 Q6Q795 121 aa12.6□□□□□ -0.39
SQLE-206ENST00000523430 LINC00483Q53H64 154 aa12.57□□□□□ -0.4
SQLE-206ENST00000523430 ZNF706Q9Y5V0 76 aaPredicted RBP12.57□□□□□ -0.4
SQLE-206ENST00000523430 DYNC1H1Q14204 4646 aaKnown RBP12.57□□□□□ -0.4
SQLE-206ENST00000523430 IMUPQ9GZP8 106 aa12.55□□□□□ -0.4
SQLE-206ENST00000523430 ATP5EP2Q5VTU8 51 aa12.55□□□□□ -0.4
SQLE-206ENST00000523430 ANAPC11Q9NYG5 84 aa12.53□□□□□ -0.4
SQLE-206ENST00000523430 IGLV9-49A0A0B4J1Y8 123 aa12.51□□□□□ -0.41
SQLE-206ENST00000523430 CRYGAP11844 174 aa12.51□□□□□ -0.41
SQLE-206ENST00000523430 A0A1B0GW54 56 aa12.49□□□□□ -0.41
SQLE-206ENST00000523430 C9orf153Q5TBE3 101 aa12.48□□□□□ -0.41
SQLE-206ENST00000523430 A0A087WVE0 104 aa12.48□□□□□ -0.41
SQLE-206ENST00000523430 NREPQ16612 68 aa12.48□□□□□ -0.41
SQLE-206ENST00000523430 FAM236AA0A1B0GUQ0 79 aa12.46□□□□□ -0.41
SQLE-206ENST00000523430 FAM236BA0A1B0GV22 79 aa12.46□□□□□ -0.41
SQLE-206ENST00000523430 HIST1H4AP62805 103 aaKnown RBP12.46□□□□□ -0.41
SQLE-206ENST00000523430 RYR3Q15413 4870 aa12.45□□□□□ -0.42
SQLE-206ENST00000523430 CXCL6P80162 114 aa12.45□□□□□ -0.42
SQLE-206ENST00000523430 APOBP04114 4563 aaKnown RBP12.44□□□□□ -0.42
SQLE-206ENST00000523430 VPS13BQ7Z7G8 4022 aa12.44□□□□□ -0.42
SQLE-206ENST00000523430 A0A087WSZ3 146 aa12.43□□□□□ -0.42
SQLE-206ENST00000523430 MOBPQ13875 183 aa12.43□□□□□ -0.42
SQLE-206ENST00000523430 BPY2O14599 106 aa12.38□□□□□ -0.43
SQLE-206ENST00000523430 Q8N9L7 120 aa12.37□□□□□ -0.43
SQLE-206ENST00000523430 ANAPC13Q9BS18 74 aa12.36□□□□□ -0.43
SQLE-206ENST00000523430 RPL37AP61513 92 aaKnown RBP12.35□□□□□ -0.43
SQLE-206ENST00000523430 SMR3BP02814 79 aaPredicted RBP12.34□□□□□ -0.43
SQLE-206ENST00000523430 HRCT1Q6UXD1 115 aa12.33□□□□□ -0.44
SQLE-206ENST00000523430 A0A087X002 238 aa12.3□□□□□ -0.44
SQLE-206ENST00000523430 IGKV4-1P06312 121 aa12.3□□□□□ -0.44
SQLE-206ENST00000523430 DEFB116Q30KQ4 102 aa12.3□□□□□ -0.44
SQLE-206ENST00000523430 KRTAP1-4P0C5Y4 121 aa12.28□□□□□ -0.44
SQLE-206ENST00000523430 DSCR10P59022 87 aa12.28□□□□□ -0.44
SQLE-206ENST00000523430 FAT1Q14517 4588 aa12.28□□□□□ -0.44
SQLE-206ENST00000523430 KRTAP13-2Q52LG2 175 aa12.25□□□□□ -0.45
SQLE-206ENST00000523430 K7EQZ3 153 aa12.23□□□□□ -0.45
SQLE-206ENST00000523430 ATOX1O00244 68 aa12.23□□□□□ -0.45
SQLE-206ENST00000523430 FAM229BQ4G0N7 80 aa12.23□□□□□ -0.45
SQLE-206ENST00000523430 LINC00472Q9H8W2 130 aa12.23□□□□□ -0.45
SQLE-206ENST00000523430 KRTAP10-4P60372 401 aaPredicted RBP12.21□□□□□ -0.46
SQLE-206ENST00000523430 SPINK6Q6UWN8 80 aa12.21□□□□□ -0.46
SQLE-206ENST00000523430 SSBP3-AS1Q7Z2R9 100 aa12.19□□□□□ -0.46
SQLE-206ENST00000523430 Q96NJ1 140 aa12.18□□□□□ -0.46
SQLE-206ENST00000523430 SS18L2Q9UHA2 77 aa12.17□□□□□ -0.46
SQLE-206ENST00000523430 PLA2G1BP04054 148 aaKnown RBP12.15□□□□□ -0.46
SQLE-206ENST00000523430 CCDC179H3BU77 68 aa12.14□□□□□ -0.47
SQLE-206ENST00000523430 CD164Q04900 197 aa12.13□□□□□ -0.47
SQLE-206ENST00000523430 HSPG2P98160 4391 aa12.11□□□□□ -0.47
SQLE-206ENST00000523430 A8MWP4 228 aa12.1□□□□□ -0.47
SQLE-206ENST00000523430 SERP2Q8N6R1 65 aa12.08□□□□□ -0.48
SQLE-206ENST00000523430 J3KT08 172 aa12.08□□□□□ -0.48
SQLE-206ENST00000523430 COX7CP15954 63 aa12.07□□□□□ -0.48
SQLE-206ENST00000523430 PRR15Q8IV56 129 aa12.07□□□□□ -0.48
SQLE-206ENST00000523430 HCG22E2RYF7 251 aa12.06□□□□□ -0.48
SQLE-206ENST00000523430 PRR26Q8N8Z3 221 aa12.06□□□□□ -0.48
SQLE-206ENST00000523430 TYMSOSQ8TAI1 123 aa12.06□□□□□ -0.48
SQLE-206ENST00000523430 UQCRQO14949 82 aa12.04□□□□□ -0.48
SQLE-206ENST00000523430 CDK2AP2O75956 126 aa12.03□□□□□ -0.48
SQLE-206ENST00000523430 RYR1P21817 5038 aa12.02□□□□□ -0.49
SQLE-206ENST00000523430 WFDC13Q8IUB5 93 aa12.01□□□□□ -0.49
SQLE-206ENST00000523430 PKHD1L1Q86WI1 4243 aa12.01□□□□□ -0.49
SQLE-206ENST00000523430 TRAV7A0A075B6U4 112 aa12□□□□□ -0.49
SQLE-206ENST00000523430 EPPK1P58107 5090 aaKnown RBP12□□□□□ -0.49
SQLE-206ENST00000523430 SMIM20Q8N5G0 67 aa11.99□□□□□ -0.49
SQLE-206ENST00000523430 FAM229AH3BQW9 127 aa11.98□□□□□ -0.49
SQLE-206ENST00000523430 NDUFB1O75438 58 aa11.98□□□□□ -0.49
SQLE-206ENST00000523430 ASB16-AS1Q495Z4 193 aa11.97□□□□□ -0.49
SQLE-206ENST00000523430 OCR1Q9BZK8 76 aa11.97□□□□□ -0.49
SQLE-206ENST00000523430 Q5VSD8 79 aa11.97□□□□□ -0.49
SQLE-206ENST00000523430 KRTAP29-1A8MX34 341 aaPredicted RBP11.96□□□□□ -0.49
SQLE-206ENST00000523430 MMP24-AS1A0A0U1RRL7 71 aa11.95□□□□□ -0.5
SQLE-206ENST00000523430 Q5XG85 94 aa11.95□□□□□ -0.5
SQLE-206ENST00000523430 A0A1B0GVX0 72 aa11.94□□□□□ -0.5
SQLE-206ENST00000523430 IGHV6-1A0A0B4J1U7 121 aa11.93□□□□□ -0.5
SQLE-206ENST00000523430 CASC2Q6XLA1 102 aa11.93□□□□□ -0.5
SQLE-206ENST00000523430 C4orf48Q5BLP8 95 aa11.93□□□□□ -0.5
SQLE-206ENST00000523430 KRTAP17-1Q9BYP8 105 aa11.93□□□□□ -0.5
SQLE-206ENST00000523430 LIMD2Q9BT23 127 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms