RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 HIST1H2BKO60814 126 aa13.27□□□□□ -0.29
PVT1-219ENST00000523427 HIST1H2BJP06899 126 aa13.27□□□□□ -0.29
PVT1-219ENST00000523427 HIST1H2BOP23527 126 aa13.27□□□□□ -0.29
PVT1-219ENST00000523427 HIST1H2BBP33778 126 aa13.27□□□□□ -0.29
PVT1-219ENST00000523427 HIST1H2BDP58876 126 aa13.27□□□□□ -0.29
PVT1-219ENST00000523427 KRTDAPP60985 99 aa13.27□□□□□ -0.29
PVT1-219ENST00000523427 HIST1H2BCP62807 126 aa13.27□□□□□ -0.29
PVT1-219ENST00000523427 HIST2H2BEQ16778 126 aa13.27□□□□□ -0.29
PVT1-219ENST00000523427 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.27□□□□□ -0.29
PVT1-219ENST00000523427 Q6ZQY7 126 aa13.27□□□□□ -0.29
PVT1-219ENST00000523427 HIST1H2BHQ93079 126 aa13.27□□□□□ -0.29
PVT1-219ENST00000523427 HIST1H2BNQ99877 126 aa13.27□□□□□ -0.29
PVT1-219ENST00000523427 HIST1H2BMQ99879 126 aa13.27□□□□□ -0.29
PVT1-219ENST00000523427 VAMP3Q15836 100 aa13.26□□□□□ -0.29
PVT1-219ENST00000523427 Q6ZVH6 145 aa13.26□□□□□ -0.29
PVT1-219ENST00000523427 OCIAD2Q56VL3 154 aa13.24□□□□□ -0.29
PVT1-219ENST00000523427 LINC00575Q6W349 94 aa13.24□□□□□ -0.29
PVT1-219ENST00000523427 ATOH7Q8N100 152 aa13.23□□□□□ -0.29
PVT1-219ENST00000523427 TRBV20-1A0A075B6N2 111 aa13.21□□□□□ -0.29
PVT1-219ENST00000523427 hADV29S1A0JD25 119 aa13.21□□□□□ -0.29
PVT1-219ENST00000523427 LST1O00453 97 aa13.21□□□□□ -0.29
PVT1-219ENST00000523427 FCGBPQ9Y6R7 5405 aaPredicted RBP13.18□□□□□ -0.3
PVT1-219ENST00000523427 H3BUT2 72 aa13.14□□□□□ -0.31
PVT1-219ENST00000523427 SNHG12Q9BXW3 62 aa13.13□□□□□ -0.31
PVT1-219ENST00000523427 MT2AP02795 61 aa13.12□□□□□ -0.31
PVT1-219ENST00000523427 C20orf166-AS1Q96NR2 134 aa13.12□□□□□ -0.31
PVT1-219ENST00000523427 KRTAP19-1Q8IUB9 90 aa13.11□□□□□ -0.31
PVT1-219ENST00000523427 A8MUU9 505 aa13.09□□□□□ -0.31
PVT1-219ENST00000523427 FAM236DA0A1B0GTK5 79 aa13.08□□□□□ -0.32
PVT1-219ENST00000523427 FAM236CP0DP71 79 aa13.08□□□□□ -0.32
PVT1-219ENST00000523427 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.07□□□□□ -0.32
PVT1-219ENST00000523427 LCE2BO14633 110 aa13.05□□□□□ -0.32
PVT1-219ENST00000523427 SS18L2Q9UHA2 77 aa13.03□□□□□ -0.32
PVT1-219ENST00000523427 MT1FP04733 61 aa13.02□□□□□ -0.33
PVT1-219ENST00000523427 DSCR10P59022 87 aa13.02□□□□□ -0.33
PVT1-219ENST00000523427 SCGB1D1O95968 90 aa12.99□□□□□ -0.33
PVT1-219ENST00000523427 KRTAP10-10P60014 251 aa12.99□□□□□ -0.33
PVT1-219ENST00000523427 PPDPFLQ8WWR9 84 aa12.99□□□□□ -0.33
PVT1-219ENST00000523427 C12orf57Q99622 126 aa12.99□□□□□ -0.33
PVT1-219ENST00000523427 COA6Q5JTJ3 125 aaKnown RBP12.97□□□□□ -0.33
PVT1-219ENST00000523427 A0A087WSZ3 146 aa12.95□□□□□ -0.34
PVT1-219ENST00000523427 KRTAP16-1A8MUX0 517 aa12.95□□□□□ -0.34
PVT1-219ENST00000523427 BVES-AS1Q5T3Y7 98 aa12.94□□□□□ -0.34
PVT1-219ENST00000523427 KRTAP9-3Q9BYQ3 159 aa12.94□□□□□ -0.34
PVT1-219ENST00000523427 TEN1Q86WV5 123 aa12.93□□□□□ -0.34
PVT1-219ENST00000523427 SNRPEP62304 92 aaKnown RBP12.91□□□□□ -0.34
PVT1-219ENST00000523427 SIGMAR1Q99720 223 aa12.9□□□□□ -0.34
PVT1-219ENST00000523427 RBM12B-AS1Q9P1G2 102 aa12.89□□□□□ -0.35
PVT1-219ENST00000523427 NDUFV3P56181 108 aaKnown RBP12.86□□□□□ -0.35
PVT1-219ENST00000523427 SYNE2Q8WXH0 6885 aaKnown RBP12.86□□□□□ -0.35
PVT1-219ENST00000523427 MACF1Q9UPN3 7388 aaKnown RBP12.85□□□□□ -0.35
PVT1-219ENST00000523427 HSBP1L1C9JCN9 74 aa12.83□□□□□ -0.36
PVT1-219ENST00000523427 LINC00313P59037 77 aa12.83□□□□□ -0.36
PVT1-219ENST00000523427 HRES1P13985 223 aa12.82□□□□□ -0.36
PVT1-219ENST00000523427 HIST1H4GQ99525 98 aa12.82□□□□□ -0.36
PVT1-219ENST00000523427 H3BMG7 143 aa12.79□□□□□ -0.36
PVT1-219ENST00000523427 MPLKIPQ8TAP9 179 aa12.79□□□□□ -0.36
PVT1-219ENST00000523427 SNCGO76070 127 aa12.78□□□□□ -0.36
PVT1-219ENST00000523427 IGKV4-1P06312 121 aa12.76□□□□□ -0.37
PVT1-219ENST00000523427 FAM218AQ96MZ4 157 aa12.76□□□□□ -0.37
PVT1-219ENST00000523427 FABP2P12104 132 aa12.75□□□□□ -0.37
PVT1-219ENST00000523427 NOTCH2NLQ7Z3S9 236 aa12.74□□□□□ -0.37
PVT1-219ENST00000523427 LINC00846Q9NV44 126 aa12.73□□□□□ -0.37
PVT1-219ENST00000523427 A0A1W2PNM2 257 aa12.72□□□□□ -0.37
PVT1-219ENST00000523427 RAB37Q96AX2 223 aa12.71□□□□□ -0.37
PVT1-219ENST00000523427 H0YGX0 51 aa12.7□□□□□ -0.38
PVT1-219ENST00000523427 DEFB116Q30KQ4 102 aa12.7□□□□□ -0.38
PVT1-219ENST00000523427 A0A1B0GV72 72 aa12.66□□□□□ -0.38
PVT1-219ENST00000523427 S100A2P29034 98 aa12.66□□□□□ -0.38
PVT1-219ENST00000523427 HIST1H2BLQ99880 126 aa12.65□□□□□ -0.38
PVT1-219ENST00000523427 IGHV6-1A0A0B4J1U7 121 aa12.64□□□□□ -0.39
PVT1-219ENST00000523427 KRTAP19-6Q3LI70 58 aa12.64□□□□□ -0.39
PVT1-219ENST00000523427 HIST3H2BBQ8N257 126 aa12.63□□□□□ -0.39
PVT1-219ENST00000523427 MTURNQ8N3F0 131 aa12.62□□□□□ -0.39
PVT1-219ENST00000523427 ANKRD29Q8N6D5 301 aa12.6□□□□□ -0.39
PVT1-219ENST00000523427 GHRHP01286 108 aa12.59□□□□□ -0.39
PVT1-219ENST00000523427 COX8AP10176 69 aa12.57□□□□□ -0.4
PVT1-219ENST00000523427 A0A0B4J2C4 111 aa12.54□□□□□ -0.4
PVT1-219ENST00000523427 TRBV7-4A0A0J9YYF1 115 aa12.54□□□□□ -0.4
PVT1-219ENST00000523427 LINC00472Q9H8W2 130 aa12.54□□□□□ -0.4
PVT1-219ENST00000523427 A0A1B0GX51 115 aa12.52□□□□□ -0.41
PVT1-219ENST00000523427 C14orf144Q96I85 54 aa12.5□□□□□ -0.41
PVT1-219ENST00000523427 SPINK7P58062 85 aa12.49□□□□□ -0.41
PVT1-219ENST00000523427 TRACP01848 142 aa12.47□□□□□ -0.41
PVT1-219ENST00000523427 CCKP06307 115 aa12.47□□□□□ -0.41
PVT1-219ENST00000523427 DLEU1O43261 78 aa12.46□□□□□ -0.41
PVT1-219ENST00000523427 Q8N9P0 234 aaPredicted RBP12.46□□□□□ -0.41
PVT1-219ENST00000523427 ZCCHC13Q8WW36 166 aaKnown RBP12.46□□□□□ -0.41
PVT1-219ENST00000523427 PRO1854Q9UHT4 67 aa12.44□□□□□ -0.42
PVT1-219ENST00000523427 A8MWP4 228 aa12.43□□□□□ -0.42
PVT1-219ENST00000523427 DNAL4O96015 105 aa12.43□□□□□ -0.42
PVT1-219ENST00000523427 KRTAP6-3Q3LI67 103 aa12.43□□□□□ -0.42
PVT1-219ENST00000523427 ORMDL1Q9P0S3 153 aa12.43□□□□□ -0.42
PVT1-219ENST00000523427 A0A1B0GVX0 72 aa12.42□□□□□ -0.42
PVT1-219ENST00000523427 C8orf87E5RJ46 101 aa12.42□□□□□ -0.42
PVT1-219ENST00000523427 TRIAP1O43715 76 aa12.42□□□□□ -0.42
PVT1-219ENST00000523427 S100A6P06703 90 aa12.4□□□□□ -0.42
PVT1-219ENST00000523427 VPS25Q9BRG1 176 aa12.4□□□□□ -0.42
PVT1-219ENST00000523427 HIGD1BQ9P298 99 aa12.4□□□□□ -0.42
PVT1-219ENST00000523427 WFDC13Q8IUB5 93 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms