RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 MT2AP02795 61 aa11.53□□□□□ -0.56
PVT1-218ENST00000523328 Q96NJ1 140 aa11.53□□□□□ -0.56
PVT1-218ENST00000523328 LCE2BO14633 110 aa11.51□□□□□ -0.57
PVT1-218ENST00000523328 LINC00575Q6W349 94 aa11.51□□□□□ -0.57
PVT1-218ENST00000523328 Q6ZQY7 126 aa11.51□□□□□ -0.57
PVT1-218ENST00000523328 C20orf166-AS1Q96NR2 134 aa11.51□□□□□ -0.57
PVT1-218ENST00000523328 C3orf79P0CE67 100 aa11.5□□□□□ -0.57
PVT1-218ENST00000523328 ANKRD39Q53RE8 183 aa11.49□□□□□ -0.57
PVT1-218ENST00000523328 OCIAD2Q56VL3 154 aa11.49□□□□□ -0.57
PVT1-218ENST00000523328 SLC7A5P1Q8MH63 180 aa11.49□□□□□ -0.57
PVT1-218ENST00000523328 TRBV20-1A0A075B6N2 111 aa11.48□□□□□ -0.57
PVT1-218ENST00000523328 HIST1H2BKO60814 126 aa11.48□□□□□ -0.57
PVT1-218ENST00000523328 HIST1H2BJP06899 126 aa11.48□□□□□ -0.57
PVT1-218ENST00000523328 HIST1H2BOP23527 126 aa11.48□□□□□ -0.57
PVT1-218ENST00000523328 HIST1H2BBP33778 126 aa11.48□□□□□ -0.57
PVT1-218ENST00000523328 HIST1H2BDP58876 126 aa11.48□□□□□ -0.57
PVT1-218ENST00000523328 HIST1H2BCP62807 126 aa11.48□□□□□ -0.57
PVT1-218ENST00000523328 HIST2H2BEQ16778 126 aa11.48□□□□□ -0.57
PVT1-218ENST00000523328 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.48□□□□□ -0.57
PVT1-218ENST00000523328 HIST1H2BHQ93079 126 aa11.48□□□□□ -0.57
PVT1-218ENST00000523328 HIST1H2BNQ99877 126 aa11.48□□□□□ -0.57
PVT1-218ENST00000523328 HIST1H2BMQ99879 126 aa11.48□□□□□ -0.57
PVT1-218ENST00000523328 A8MUU9 505 aa11.47□□□□□ -0.57
PVT1-218ENST00000523328 LST1O00453 97 aa11.46□□□□□ -0.57
PVT1-218ENST00000523328 VAMP3Q15836 100 aa11.46□□□□□ -0.57
PVT1-218ENST00000523328 hADV29S1A0JD25 119 aa11.45□□□□□ -0.58
PVT1-218ENST00000523328 MT1FP04733 61 aa11.45□□□□□ -0.58
PVT1-218ENST00000523328 KRTAP9-3Q9BYQ3 159 aa11.43□□□□□ -0.58
PVT1-218ENST00000523328 KRTDAPP60985 99 aa11.4□□□□□ -0.58
PVT1-218ENST00000523328 H3BUT2 72 aa11.37□□□□□ -0.59
PVT1-218ENST00000523328 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.37□□□□□ -0.59
PVT1-218ENST00000523328 ATOH7Q8N100 152 aa11.36□□□□□ -0.59
PVT1-218ENST00000523328 PPDPFLQ8WWR9 84 aa11.35□□□□□ -0.59
PVT1-218ENST00000523328 SS18L2Q9UHA2 77 aa11.34□□□□□ -0.59
PVT1-218ENST00000523328 KRTAP16-1A8MUX0 517 aa11.33□□□□□ -0.6
PVT1-218ENST00000523328 KRTAP10-10P60014 251 aa11.33□□□□□ -0.6
PVT1-218ENST00000523328 SNHG12Q9BXW3 62 aa11.33□□□□□ -0.6
PVT1-218ENST00000523328 MACF1Q9UPN3 7388 aaKnown RBP11.32□□□□□ -0.6
PVT1-218ENST00000523328 FAM236DA0A1B0GTK5 79 aa11.31□□□□□ -0.6
PVT1-218ENST00000523328 SCGB1D1O95968 90 aa11.31□□□□□ -0.6
PVT1-218ENST00000523328 FAM236CP0DP71 79 aa11.31□□□□□ -0.6
PVT1-218ENST00000523328 MPLKIPQ8TAP9 179 aa11.29□□□□□ -0.6
PVT1-218ENST00000523328 COA6Q5JTJ3 125 aaKnown RBP11.28□□□□□ -0.6
PVT1-218ENST00000523328 SYNE2Q8WXH0 6885 aaKnown RBP11.27□□□□□ -0.6
PVT1-218ENST00000523328 DSCR10P59022 87 aa11.27□□□□□ -0.61
PVT1-218ENST00000523328 TEN1Q86WV5 123 aa11.25□□□□□ -0.61
PVT1-218ENST00000523328 HRES1P13985 223 aa11.24□□□□□ -0.61
PVT1-218ENST00000523328 A0A087WSZ3 146 aa11.23□□□□□ -0.61
PVT1-218ENST00000523328 BVES-AS1Q5T3Y7 98 aa11.23□□□□□ -0.61
PVT1-218ENST00000523328 RBM12B-AS1Q9P1G2 102 aa11.21□□□□□ -0.61
PVT1-218ENST00000523328 SNRPEP62304 92 aaKnown RBP11.19□□□□□ -0.62
PVT1-218ENST00000523328 KRTAP19-6Q3LI70 58 aa11.19□□□□□ -0.62
PVT1-218ENST00000523328 C12orf57Q99622 126 aa11.16□□□□□ -0.62
PVT1-218ENST00000523328 NDUFV3P56181 108 aaKnown RBP11.15□□□□□ -0.62
PVT1-218ENST00000523328 LINC00846Q9NV44 126 aa11.15□□□□□ -0.62
PVT1-218ENST00000523328 LINC00313P59037 77 aa11.14□□□□□ -0.63
PVT1-218ENST00000523328 NOTCH2NLQ7Z3S9 236 aa11.14□□□□□ -0.63
PVT1-218ENST00000523328 SIGMAR1Q99720 223 aa11.14□□□□□ -0.63
PVT1-218ENST00000523328 A0A1W2PNM2 257 aa11.07□□□□□ -0.64
PVT1-218ENST00000523328 FAM218AQ96MZ4 157 aa11.07□□□□□ -0.64
PVT1-218ENST00000523328 H3BMG7 143 aa11.06□□□□□ -0.64
PVT1-218ENST00000523328 IGKV4-1P06312 121 aa11.04□□□□□ -0.64
PVT1-218ENST00000523328 HIST1H4GQ99525 98 aa11.03□□□□□ -0.64
PVT1-218ENST00000523328 HSBP1L1C9JCN9 74 aa11.02□□□□□ -0.65
PVT1-218ENST00000523328 SNCGO76070 127 aa11.02□□□□□ -0.65
PVT1-218ENST00000523328 H0YGX0 51 aa11.01□□□□□ -0.65
PVT1-218ENST00000523328 KRTAP6-3Q3LI67 103 aa11.01□□□□□ -0.65
PVT1-218ENST00000523328 MTURNQ8N3F0 131 aa10.98□□□□□ -0.65
PVT1-218ENST00000523328 FABP2P12104 132 aa10.96□□□□□ -0.65
PVT1-218ENST00000523328 DEFB116Q30KQ4 102 aa10.95□□□□□ -0.66
PVT1-218ENST00000523328 LINC00472Q9H8W2 130 aa10.94□□□□□ -0.66
PVT1-218ENST00000523328 TRBV7-4A0A0J9YYF1 115 aa10.93□□□□□ -0.66
PVT1-218ENST00000523328 RAB37Q96AX2 223 aa10.93□□□□□ -0.66
PVT1-218ENST00000523328 IGHV6-1A0A0B4J1U7 121 aa10.92□□□□□ -0.66
PVT1-218ENST00000523328 GHRHP01286 108 aa10.92□□□□□ -0.66
PVT1-218ENST00000523328 HIST1H2BLQ99880 126 aa10.92□□□□□ -0.66
PVT1-218ENST00000523328 A0A1B0GX51 115 aa10.91□□□□□ -0.66
PVT1-218ENST00000523328 HIST3H2BBQ8N257 126 aa10.91□□□□□ -0.66
PVT1-218ENST00000523328 A0A0B4J2C4 111 aa10.89□□□□□ -0.67
PVT1-218ENST00000523328 A8MWP4 228 aa10.89□□□□□ -0.67
PVT1-218ENST00000523328 COX8AP10176 69 aa10.88□□□□□ -0.67
PVT1-218ENST00000523328 ANKRD29Q8N6D5 301 aa10.88□□□□□ -0.67
PVT1-218ENST00000523328 SPINK7P58062 85 aa10.87□□□□□ -0.67
PVT1-218ENST00000523328 Q8N9P0 234 aaPredicted RBP10.85□□□□□ -0.67
PVT1-218ENST00000523328 ZCCHC13Q8WW36 166 aaKnown RBP10.85□□□□□ -0.67
PVT1-218ENST00000523328 S100A2P29034 98 aa10.84□□□□□ -0.67
PVT1-218ENST00000523328 DLEU1O43261 78 aa10.83□□□□□ -0.68
PVT1-218ENST00000523328 A0A1B0GV72 72 aa10.82□□□□□ -0.68
PVT1-218ENST00000523328 C8orf87E5RJ46 101 aa10.82□□□□□ -0.68
PVT1-218ENST00000523328 A0A1B0GVX0 72 aa10.8□□□□□ -0.68
PVT1-218ENST00000523328 TRACP01848 142 aa10.78□□□□□ -0.68
PVT1-218ENST00000523328 CCKP06307 115 aa10.78□□□□□ -0.68
PVT1-218ENST00000523328 HIGD1BQ9P298 99 aa10.76□□□□□ -0.69
PVT1-218ENST00000523328 TRIAP1O43715 76 aa10.75□□□□□ -0.69
PVT1-218ENST00000523328 ORMDL1Q9P0S3 153 aa10.75□□□□□ -0.69
PVT1-218ENST00000523328 PRO1854Q9UHT4 67 aa10.75□□□□□ -0.69
PVT1-218ENST00000523328 WFDC13Q8IUB5 93 aa10.74□□□□□ -0.69
PVT1-218ENST00000523328 C14orf144Q96I85 54 aa10.74□□□□□ -0.69
PVT1-218ENST00000523328 C2orf91Q6ZV80 131 aa10.71□□□□□ -0.69
PVT1-218ENST00000523328 H3BQ85 93 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms