RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 KRTAP10-5P60370 271 aa4.1□□□□□ -1.75
TRAPPC9-212ENST00000521944 IGLV5-48A0A075B6I7 105 aa4.09□□□□□ -1.75
TRAPPC9-212ENST00000521944 TSPEAR-AS2P59090 65 aa4.09□□□□□ -1.75
TRAPPC9-212ENST00000521944 RPS10P5Q9NQ39 176 aa4.09□□□□□ -1.75
TRAPPC9-212ENST00000521944 LINC00587B1AMM8 73 aa4.08□□□□□ -1.76
TRAPPC9-212ENST00000521944 HINT1P49773 126 aaPredicted RBP4.08□□□□□ -1.76
TRAPPC9-212ENST00000521944 ELOF1P60002 83 aaKnown RBP4.08□□□□□ -1.76
TRAPPC9-212ENST00000521944 SNRPEP62304 92 aaKnown RBP4.08□□□□□ -1.76
TRAPPC9-212ENST00000521944 MAP1LC3CQ9BXW4 147 aa4.08□□□□□ -1.76
TRAPPC9-212ENST00000521944 HBDP02042 147 aa4.07□□□□□ -1.76
TRAPPC9-212ENST00000521944 PMCHL1Q16048 86 aa4.07□□□□□ -1.76
TRAPPC9-212ENST00000521944 TCTE3Q8IZS6 198 aa4.07□□□□□ -1.76
TRAPPC9-212ENST00000521944 SPRR2FQ96RM1 72 aa4.07□□□□□ -1.76
TRAPPC9-212ENST00000521944 TRBV7-7A0A0K0K1E9 115 aa4.06□□□□□ -1.76
TRAPPC9-212ENST00000521944 MYMXA0A1B0GTQ4 84 aa4.06□□□□□ -1.76
TRAPPC9-212ENST00000521944 ADAMTSL4-AS1Q5T5F5 129 aa4.05□□□□□ -1.76
TRAPPC9-212ENST00000521944 COX7BP24311 80 aa4.04□□□□□ -1.76
TRAPPC9-212ENST00000521944 NPC2P61916 151 aa4.04□□□□□ -1.76
TRAPPC9-212ENST00000521944 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.04□□□□□ -1.76
TRAPPC9-212ENST00000521944 PEA15Q15121 130 aa4.03□□□□□ -1.76
TRAPPC9-212ENST00000521944 SMCO4Q9NRQ5 59 aa4.03□□□□□ -1.76
TRAPPC9-212ENST00000521944 MIEN1Q9BRT3 115 aa4.02□□□□□ -1.77
TRAPPC9-212ENST00000521944 NDUFAF8A1L188 74 aa4.01□□□□□ -1.77
TRAPPC9-212ENST00000521944 DSCR10P59022 87 aa4.01□□□□□ -1.77
TRAPPC9-212ENST00000521944 RHEBQ15382 184 aa4.01□□□□□ -1.77
TRAPPC9-212ENST00000521944 MT-ND4LP03901 98 aa4□□□□□ -1.77
TRAPPC9-212ENST00000521944 SPRR2DP22532 72 aa4□□□□□ -1.77
TRAPPC9-212ENST00000521944 COMMD7Q86VX2 200 aa4□□□□□ -1.77
TRAPPC9-212ENST00000521944 OR13C6PQ8NH95 151 aa4□□□□□ -1.77
TRAPPC9-212ENST00000521944 TRAV12-1A0A0B4J245 112 aa3.99□□□□□ -1.77
TRAPPC9-212ENST00000521944 LST1O00453 97 aa3.99□□□□□ -1.77
TRAPPC9-212ENST00000521944 LINC00614P0C842 121 aa3.99□□□□□ -1.77
TRAPPC9-212ENST00000521944 KRTAP19-8Q3LI54 63 aa3.99□□□□□ -1.77
TRAPPC9-212ENST00000521944 CBY1Q9Y3M2 126 aa3.99□□□□□ -1.77
TRAPPC9-212ENST00000521944 LEPROTO15243 131 aa3.98□□□□□ -1.77
TRAPPC9-212ENST00000521944 MTURNQ8N3F0 131 aa3.97□□□□□ -1.77
TRAPPC9-212ENST00000521944 CLEC2BQ92478 149 aa3.97□□□□□ -1.77
TRAPPC9-212ENST00000521944 DSTQ03001 7570 aaKnown RBP3.96□□□□□ -1.78
TRAPPC9-212ENST00000521944 TRBV7-6A0A0J9YX20 115 aa3.96□□□□□ -1.78
TRAPPC9-212ENST00000521944 J3QQQ9 107 aa3.96□□□□□ -1.78
TRAPPC9-212ENST00000521944 IFITM2Q01629 132 aa3.96□□□□□ -1.78
TRAPPC9-212ENST00000521944 LCE1FQ5T754 118 aa3.96□□□□□ -1.78
TRAPPC9-212ENST00000521944 Q5VV11 94 aa3.96□□□□□ -1.78
TRAPPC9-212ENST00000521944 C18orf32Q8TCD1 76 aa3.96□□□□□ -1.78
TRAPPC9-212ENST00000521944 SPANXDQ9BXN6 97 aa3.96□□□□□ -1.78
TRAPPC9-212ENST00000521944 SPANXCQ9NY87 97 aa3.96□□□□□ -1.78
TRAPPC9-212ENST00000521944 A0A0J9YXY3 114 aa3.95□□□□□ -1.78
TRAPPC9-212ENST00000521944 KRTAP10-12P60413 245 aa3.95□□□□□ -1.78
TRAPPC9-212ENST00000521944 Q6JHZ5 121 aa3.95□□□□□ -1.78
TRAPPC9-212ENST00000521944 LINC00518Q8N0U6 118 aa3.95□□□□□ -1.78
TRAPPC9-212ENST00000521944 IFI27L1Q96BM0 104 aa3.95□□□□□ -1.78
TRAPPC9-212ENST00000521944 FABP9Q0Z7S8 132 aa3.94□□□□□ -1.78
TRAPPC9-212ENST00000521944 LINC00308Q8TCZ7 52 aa3.94□□□□□ -1.78
TRAPPC9-212ENST00000521944 A0A1B0GWB2 263 aa3.93□□□□□ -1.78
TRAPPC9-212ENST00000521944 A0A1W2PNM2 257 aa3.92□□□□□ -1.78
TRAPPC9-212ENST00000521944 NMUP48645 174 aa3.92□□□□□ -1.78
TRAPPC9-212ENST00000521944 SPINK7P58062 85 aa3.92□□□□□ -1.78
TRAPPC9-212ENST00000521944 OCIAD2Q56VL3 154 aa3.92□□□□□ -1.78
TRAPPC9-212ENST00000521944 PRAC1Q96KF2 57 aa3.92□□□□□ -1.78
TRAPPC9-212ENST00000521944 F8WEM9 126 aa3.91□□□□□ -1.78
TRAPPC9-212ENST00000521944 SPRR2GQ9BYE4 73 aa3.91□□□□□ -1.78
TRAPPC9-212ENST00000521944 COLCA2A8K830 154 aa3.9□□□□□ -1.79
TRAPPC9-212ENST00000521944 LINC00313P59037 77 aa3.9□□□□□ -1.79
TRAPPC9-212ENST00000521944 FAM218AQ96MZ4 157 aa3.9□□□□□ -1.79
TRAPPC9-212ENST00000521944 SEC11CQ9BY50 192 aa3.9□□□□□ -1.79
TRAPPC9-212ENST00000521944 TRAV13-2A0A0B4J235 113 aa3.87□□□□□ -1.79
TRAPPC9-212ENST00000521944 H3BUT2 72 aa3.87□□□□□ -1.79
TRAPPC9-212ENST00000521944 WFDC13Q8IUB5 93 aa3.87□□□□□ -1.79
TRAPPC9-212ENST00000521944 ZNF815PA8K554 130 aa3.86□□□□□ -1.79
TRAPPC9-212ENST00000521944 A4D1N5 150 aa3.85□□□□□ -1.79
TRAPPC9-212ENST00000521944 H0Y8G0 127 aa3.85□□□□□ -1.79
TRAPPC9-212ENST00000521944 COX19Q49B96 90 aa3.85□□□□□ -1.79
TRAPPC9-212ENST00000521944 Q6ZQY7 126 aa3.85□□□□□ -1.79
TRAPPC9-212ENST00000521944 KRTAP8-1Q8IUC2 63 aa3.85□□□□□ -1.79
TRAPPC9-212ENST00000521944 SERF1AO75920 110 aa3.84□□□□□ -1.79
TRAPPC9-212ENST00000521944 SLC7A5P1Q8MH63 180 aa3.84□□□□□ -1.79
TRAPPC9-212ENST00000521944 PMCHL2Q9BQD1 86 aa3.84□□□□□ -1.79
TRAPPC9-212ENST00000521944 SS18L2Q9UHA2 77 aa3.84□□□□□ -1.79
TRAPPC9-212ENST00000521944 A0A087WSZ3 146 aa3.83□□□□□ -1.8
TRAPPC9-212ENST00000521944 TIMM17BO60830 172 aa3.83□□□□□ -1.8
TRAPPC9-212ENST00000521944 LINC00575Q6W349 94 aa3.83□□□□□ -1.8
TRAPPC9-212ENST00000521944 SMIM11BQ8TCY0 68 aa3.83□□□□□ -1.8
TRAPPC9-212ENST00000521944 ZCCHC13Q8WW36 166 aaKnown RBP3.83□□□□□ -1.8
TRAPPC9-212ENST00000521944 NHP2Q9NX24 153 aaKnown RBP3.83□□□□□ -1.8
TRAPPC9-212ENST00000521944 PLNP26678 52 aa3.82□□□□□ -1.8
TRAPPC9-212ENST00000521944 H1FX-AS1Q4G0G2 97 aa3.82□□□□□ -1.8
TRAPPC9-212ENST00000521944 TRAPPC1Q9Y5R8 145 aa3.82□□□□□ -1.8
TRAPPC9-212ENST00000521944 E9PLD3 99 aa3.81□□□□□ -1.8
TRAPPC9-212ENST00000521944 HERVK_113P61574 105 aa3.81□□□□□ -1.8
TRAPPC9-212ENST00000521944 CHCHD1Q96BP2 118 aaKnown RBP3.81□□□□□ -1.8
TRAPPC9-212ENST00000521944 SIGMAR1Q99720 223 aa3.81□□□□□ -1.8
TRAPPC9-212ENST00000521944 A6NDN8 102 aa3.8□□□□□ -1.8
TRAPPC9-212ENST00000521944 DPM2O94777 84 aa3.8□□□□□ -1.8
TRAPPC9-212ENST00000521944 S100PP25815 95 aa3.8□□□□□ -1.8
TRAPPC9-212ENST00000521944 TEN1Q86WV5 123 aa3.8□□□□□ -1.8
TRAPPC9-212ENST00000521944 IGKCP01834 107 aa3.79□□□□□ -1.8
TRAPPC9-212ENST00000521944 TTTY13Q9BZ97 58 aa3.78□□□□□ -1.8
TRAPPC9-212ENST00000521944 hADV29S1A0JD25 119 aa3.77□□□□□ -1.81
TRAPPC9-212ENST00000521944 IGKV4-1P06312 121 aa3.77□□□□□ -1.81
TRAPPC9-212ENST00000521944 IMUPQ9GZP8 106 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms