RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 RP1L1Q8IWN7 2480 aaPredicted RBP3.36□□□□□ -1.87
NUDCD1-204ENST00000521439 A0A1W2PNN7 141 aa3.36□□□□□ -1.87
NUDCD1-204ENST00000521439 H3BUX3 64 aa3.36□□□□□ -1.87
NUDCD1-204ENST00000521439 ACYP2P14621 99 aa3.36□□□□□ -1.87
NUDCD1-204ENST00000521439 PRO2289Q9P1D8 64 aa3.36□□□□□ -1.87
NUDCD1-204ENST00000521439 PSORS1C2Q9UIG4 136 aa3.36□□□□□ -1.87
NUDCD1-204ENST00000521439 MAP1BP46821 2468 aaKnown RBP3.36□□□□□ -1.87
NUDCD1-204ENST00000521439 FREM2Q5SZK8 3169 aa3.36□□□□□ -1.87
NUDCD1-204ENST00000521439 EP300Q09472 2414 aaPredicted RBP3.35□□□□□ -1.87
NUDCD1-204ENST00000521439 LINC00304Q8N9R0 145 aa3.35□□□□□ -1.87
NUDCD1-204ENST00000521439 PRUNE2Q8WUY3 3088 aa3.35□□□□□ -1.87
NUDCD1-204ENST00000521439 HTN1P15515 57 aa3.34□□□□□ -1.87
NUDCD1-204ENST00000521439 CCL19Q99731 98 aa3.34□□□□□ -1.87
NUDCD1-204ENST00000521439 CACNA1HO95180 2353 aa3.34□□□□□ -1.87
NUDCD1-204ENST00000521439 SPEGQ15772 3267 aa3.34□□□□□ -1.88
NUDCD1-204ENST00000521439 PRRC2CQ9Y520 2896 aaKnown RBP3.33□□□□□ -1.88
NUDCD1-204ENST00000521439 COL6A6A6NMZ7 2263 aa3.33□□□□□ -1.88
NUDCD1-204ENST00000521439 APC2O95996 2303 aa3.33□□□□□ -1.88
NUDCD1-204ENST00000521439 PRO3102Q9H379 93 aa3.33□□□□□ -1.88
NUDCD1-204ENST00000521439 MGAQ8IWI9 3026 aa3.33□□□□□ -1.88
NUDCD1-204ENST00000521439 MYO15AQ9UKN7 3530 aa3.32□□□□□ -1.88
NUDCD1-204ENST00000521439 A0A0G2JQZ4 141 aa3.32□□□□□ -1.88
NUDCD1-204ENST00000521439 ANGP03950 147 aaKnown RBP3.32□□□□□ -1.88
NUDCD1-204ENST00000521439 SORL1Q92673 2214 aa3.31□□□□□ -1.88
NUDCD1-204ENST00000521439 SSBP3-AS1Q7Z2R9 100 aa3.31□□□□□ -1.88
NUDCD1-204ENST00000521439 TP53AIP1Q9HCN2 124 aa3.31□□□□□ -1.88
NUDCD1-204ENST00000521439 NOP10Q9NPE3 64 aaKnown RBP3.31□□□□□ -1.88
NUDCD1-204ENST00000521439 ABCA2Q9BZC7 2435 aa3.31□□□□□ -1.88
NUDCD1-204ENST00000521439 KMT2BQ9UMN6 2715 aaPredicted RBP3.3□□□□□ -1.88
NUDCD1-204ENST00000521439 DMDP11532 3685 aa3.3□□□□□ -1.88
NUDCD1-204ENST00000521439 SPRR1AP35321 89 aa3.3□□□□□ -1.88
NUDCD1-204ENST00000521439 UNQ6190/PRO20217Q6UXQ8 127 aa3.3□□□□□ -1.88
NUDCD1-204ENST00000521439 BRD3OSQ6XYD6 125 aa3.3□□□□□ -1.88
NUDCD1-204ENST00000521439 PRO0255Q9UI72 69 aa3.3□□□□□ -1.88
NUDCD1-204ENST00000521439 CEP290O15078 2479 aa3.3□□□□□ -1.88
NUDCD1-204ENST00000521439 TACC2O95359 2948 aa3.29□□□□□ -1.88
NUDCD1-204ENST00000521439 WNK1Q9H4A3 2382 aa3.29□□□□□ -1.88
NUDCD1-204ENST00000521439 LY6G6CO95867 125 aa3.29□□□□□ -1.88
NUDCD1-204ENST00000521439 C6orf48Q9UBA6 75 aa3.29□□□□□ -1.88
NUDCD1-204ENST00000521439 AKAP13Q12802 2813 aa3.29□□□□□ -1.88
NUDCD1-204ENST00000521439 SMG1Q96Q15 3661 aaKnown RBP3.29□□□□□ -1.88
NUDCD1-204ENST00000521439 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.28□□□□□ -1.88
NUDCD1-204ENST00000521439 TRIOBPQ9H2D6 2365 aa3.28□□□□□ -1.88
NUDCD1-204ENST00000521439 IGKV2-24A0A0C4DH68 120 aa3.28□□□□□ -1.88
NUDCD1-204ENST00000521439 K7EQZ3 153 aa3.28□□□□□ -1.88
NUDCD1-204ENST00000521439 R4GN34 69 aa3.28□□□□□ -1.88
NUDCD1-204ENST00000521439 DMXL2Q8TDJ6 3036 aa3.28□□□□□ -1.88
NUDCD1-204ENST00000521439 SPENQ96T58 3664 aaKnown RBP3.28□□□□□ -1.88
NUDCD1-204ENST00000521439 Q6ZRX8 168 aa3.27□□□□□ -1.89
NUDCD1-204ENST00000521439 DEFB124Q8NES8 71 aa3.27□□□□□ -1.89
NUDCD1-204ENST00000521439 NCOR1O75376 2440 aa3.27□□□□□ -1.89
NUDCD1-204ENST00000521439 WDFY4Q6ZS81 3184 aa3.26□□□□□ -1.89
NUDCD1-204ENST00000521439 ZDBF2Q9HCK1 2354 aa3.26□□□□□ -1.89
NUDCD1-204ENST00000521439 LELP1Q5T871 98 aa3.26□□□□□ -1.89
NUDCD1-204ENST00000521439 C10orf99Q6UWK7 81 aa3.26□□□□□ -1.89
NUDCD1-204ENST00000521439 CELSR3Q9NYQ7 3312 aa3.26□□□□□ -1.89
NUDCD1-204ENST00000521439 AKAP6Q13023 2319 aa3.25□□□□□ -1.89
NUDCD1-204ENST00000521439 BSNQ9UPA5 3926 aa3.24□□□□□ -1.89
NUDCD1-204ENST00000521439 CREBBPQ92793 2442 aa3.23□□□□□ -1.89
NUDCD1-204ENST00000521439 HRNRQ86YZ3 2850 aaPredicted RBP3.23□□□□□ -1.89
NUDCD1-204ENST00000521439 DCHS1Q96JQ0 3298 aa3.23□□□□□ -1.89
NUDCD1-204ENST00000521439 WFDC13Q8IUB5 93 aa3.23□□□□□ -1.89
NUDCD1-204ENST00000521439 ALMS1Q8TCU4 4167 aa3.22□□□□□ -1.89
NUDCD1-204ENST00000521439 DCHS2Q6V1P9 2916 aa3.22□□□□□ -1.89
NUDCD1-204ENST00000521439 H3BNG1 76 aa3.22□□□□□ -1.89
NUDCD1-204ENST00000521439 SPRR1BP22528 89 aa3.22□□□□□ -1.89
NUDCD1-204ENST00000521439 PCOTHQ58A44 107 aa3.22□□□□□ -1.89
NUDCD1-204ENST00000521439 WFDC10BQ8IUB3 73 aa3.22□□□□□ -1.89
NUDCD1-204ENST00000521439 SPTAN1Q13813 2472 aaKnown RBP3.22□□□□□ -1.89
NUDCD1-204ENST00000521439 ACACAQ13085 2346 aa3.21□□□□□ -1.89
NUDCD1-204ENST00000521439 CLPSL2Q6UWE3 100 aa3.21□□□□□ -1.9
NUDCD1-204ENST00000521439 ADGRG4Q8IZF6 3080 aa3.21□□□□□ -1.9
NUDCD1-204ENST00000521439 PTPRZ1P23471 2315 aaPredicted RBP3.21□□□□□ -1.9
NUDCD1-204ENST00000521439 CSMD1Q96PZ7 3565 aa3.2□□□□□ -1.9
NUDCD1-204ENST00000521439 C2CD3Q4AC94 2353 aa3.2□□□□□ -1.9
NUDCD1-204ENST00000521439 OTOGLQ3ZCN5 2332 aa3.2□□□□□ -1.9
NUDCD1-204ENST00000521439 TPRXLQ17RH7 258 aa3.19□□□□□ -1.9
NUDCD1-204ENST00000521439 DEFB136Q30KP8 78 aa3.19□□□□□ -1.9
NUDCD1-204ENST00000521439 ZFHX4Q86UP3 3567 aa3.19□□□□□ -1.9
NUDCD1-204ENST00000521439 ANKRD11Q6UB99 2663 aaPredicted RBP3.18□□□□□ -1.9
NUDCD1-204ENST00000521439 MMP24-AS1A0A0U1RRL7 71 aa3.18□□□□□ -1.9
NUDCD1-204ENST00000521439 SPACA4Q8TDM5 124 aa3.18□□□□□ -1.9
NUDCD1-204ENST00000521439 MAP1AP78559 2803 aaPredicted RBP3.17□□□□□ -1.9
NUDCD1-204ENST00000521439 LOC400499M0QZD8 3231 aa3.17□□□□□ -1.9
NUDCD1-204ENST00000521439 SPTA1P02549 2419 aa3.17□□□□□ -1.9
NUDCD1-204ENST00000521439 LRBAP50851 2863 aa3.16□□□□□ -1.9
NUDCD1-204ENST00000521439 INE1O15225 51 aa3.16□□□□□ -1.9
NUDCD1-204ENST00000521439 DEFB130BP0DP73 79 aa3.16□□□□□ -1.9
NUDCD1-204ENST00000521439 DEFB130AP0DP74 79 aa3.16□□□□□ -1.9
NUDCD1-204ENST00000521439 DEFB105AQ8NG35 78 aa3.16□□□□□ -1.9
NUDCD1-204ENST00000521439 PLAC4Q8WY50 150 aa3.16□□□□□ -1.9
NUDCD1-204ENST00000521439 TLN1Q9Y490 2541 aaKnown RBP3.15□□□□□ -1.91
NUDCD1-204ENST00000521439 A0A096LPF7 62 aa3.15□□□□□ -1.91
NUDCD1-204ENST00000521439 CRIPTQ9P021 101 aa3.15□□□□□ -1.91
NUDCD1-204ENST00000521439 AKAP9Q99996 3911 aa3.14□□□□□ -1.91
NUDCD1-204ENST00000521439 CSPG4Q6UVK1 2322 aa3.13□□□□□ -1.91
NUDCD1-204ENST00000521439 LINC01556Q5JQF7 62 aa3.13□□□□□ -1.91
NUDCD1-204ENST00000521439 SPART-AS1P0CW21 52 aa3.12□□□□□ -1.91
NUDCD1-204ENST00000521439 ZFHX2Q9C0A1 2572 aaPredicted RBP3.12□□□□□ -1.91
NUDCD1-204ENST00000521439 NBPF19A0A087WUL8 3843 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms