RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 UBR4Q5T4S7 5183 aa3.59□□□□□ -1.83
CTNNA1-219ENST00000520158 IGLV4-60A0A075B6I1 120 aa3.59□□□□□ -1.83
CTNNA1-219ENST00000520158 TRBV10-3A0A0K0K1G6 114 aa3.59□□□□□ -1.83
CTNNA1-219ENST00000520158 SLPIP03973 132 aa3.59□□□□□ -1.83
CTNNA1-219ENST00000520158 ATP5EP2Q5VTU8 51 aa3.59□□□□□ -1.83
CTNNA1-219ENST00000520158 SUMO4Q6EEV6 95 aa3.59□□□□□ -1.83
CTNNA1-219ENST00000520158 GFRA4Q9GZZ7 299 aa3.59□□□□□ -1.83
CTNNA1-219ENST00000520158 IGHV3-64A0A075B6Q5 118 aa3.58□□□□□ -1.84
CTNNA1-219ENST00000520158 LINC01546A6NGU7 62 aa3.58□□□□□ -1.84
CTNNA1-219ENST00000520158 PRSS2P07478 247 aa3.58□□□□□ -1.84
CTNNA1-219ENST00000520158 LYZL1Q6UWQ5 148 aa3.58□□□□□ -1.84
CTNNA1-219ENST00000520158 SPACA4Q8TDM5 124 aa3.58□□□□□ -1.84
CTNNA1-219ENST00000520158 PLAC8Q9NZF1 115 aa3.58□□□□□ -1.84
CTNNA1-219ENST00000520158 A0A087WYN8 130 aa3.57□□□□□ -1.84
CTNNA1-219ENST00000520158 A0A087X002 238 aa3.57□□□□□ -1.84
CTNNA1-219ENST00000520158 HIGD1CA8MV81 97 aa3.57□□□□□ -1.84
CTNNA1-219ENST00000520158 COX6CP09669 75 aa3.57□□□□□ -1.84
CTNNA1-219ENST00000520158 PLNP26678 52 aa3.57□□□□□ -1.84
CTNNA1-219ENST00000520158 LINC00242Q5T6M2 205 aa3.57□□□□□ -1.84
CTNNA1-219ENST00000520158 TMEM141Q96I45 108 aa3.57□□□□□ -1.84
CTNNA1-219ENST00000520158 NDUFA12Q9UI09 145 aa3.57□□□□□ -1.84
CTNNA1-219ENST00000520158 IGLV10-54A0A075B6I4 117 aa3.56□□□□□ -1.84
CTNNA1-219ENST00000520158 GVQW2A0A096LPI5 108 aaPredicted RBP3.56□□□□□ -1.84
CTNNA1-219ENST00000520158 TRBV6-5A0A0K0K1A5 114 aa3.56□□□□□ -1.84
CTNNA1-219ENST00000520158 ERC2-IT1O76042 136 aa3.56□□□□□ -1.84
CTNNA1-219ENST00000520158 MGPP08493 103 aa3.56□□□□□ -1.84
CTNNA1-219ENST00000520158 ASB16-AS1Q495Z4 193 aa3.56□□□□□ -1.84
CTNNA1-219ENST00000520158 CLPSL2Q6UWE3 100 aa3.56□□□□□ -1.84
CTNNA1-219ENST00000520158 Q6ZRP5 223 aa3.56□□□□□ -1.84
CTNNA1-219ENST00000520158 C15orf56Q8N910 161 aa3.56□□□□□ -1.84
CTNNA1-219ENST00000520158 TRAV22A0A0B4J277 110 aa3.55□□□□□ -1.84
CTNNA1-219ENST00000520158 IGKV3D-7A0A0C4DH55 119 aa3.55□□□□□ -1.84
CTNNA1-219ENST00000520158 hDV103S1A0JD37 113 aa3.55□□□□□ -1.84
CTNNA1-219ENST00000520158 NRACQ8N912 160 aa3.55□□□□□ -1.84
CTNNA1-219ENST00000520158 CYP4F30PQ9H0H9 118 aa3.55□□□□□ -1.84
CTNNA1-219ENST00000520158 RPP21Q9H633 154 aaKnown RBP3.55□□□□□ -1.84
CTNNA1-219ENST00000520158 A0A087WVE0 104 aa3.54□□□□□ -1.84
CTNNA1-219ENST00000520158 TRAV12-1A0A0B4J245 112 aa3.54□□□□□ -1.84
CTNNA1-219ENST00000520158 HCG22E2RYF7 251 aa3.54□□□□□ -1.84
CTNNA1-219ENST00000520158 CHTF8P0CG12 524 aa3.54□□□□□ -1.84
CTNNA1-219ENST00000520158 KRTAP10-8P60410 259 aa3.54□□□□□ -1.84
CTNNA1-219ENST00000520158 COX6A2Q02221 97 aa3.54□□□□□ -1.84
CTNNA1-219ENST00000520158 ORMDL3Q8N138 153 aa3.54□□□□□ -1.84
CTNNA1-219ENST00000520158 TNXBP22105 4242 aa3.53□□□□□ -1.84
CTNNA1-219ENST00000520158 LINC00959A0A1B0GUT2 108 aa3.53□□□□□ -1.84
CTNNA1-219ENST00000520158 SDHAF1A6NFY7 115 aa3.53□□□□□ -1.84
CTNNA1-219ENST00000520158 ZNF815PA8K554 130 aa3.53□□□□□ -1.84
CTNNA1-219ENST00000520158 I3L3M4 83 aa3.53□□□□□ -1.84
CTNNA1-219ENST00000520158 RPL28P46779 137 aaKnown RBP3.53□□□□□ -1.84
CTNNA1-219ENST00000520158 POLR2KP53803 58 aaKnown RBP3.53□□□□□ -1.84
CTNNA1-219ENST00000520158 SPTSSBQ8NFR3 76 aa3.53□□□□□ -1.84
CTNNA1-219ENST00000520158 C7orf33Q8WU49 177 aa3.53□□□□□ -1.84
CTNNA1-219ENST00000520158 FAM218AQ96MZ4 157 aa3.53□□□□□ -1.84
CTNNA1-219ENST00000520158 CDC42SE2Q9NRR3 84 aa3.53□□□□□ -1.84
CTNNA1-219ENST00000520158 Q1RN00 199 aa3.52□□□□□ -1.85
CTNNA1-219ENST00000520158 Q5VV11 94 aa3.52□□□□□ -1.85
CTNNA1-219ENST00000520158 SPINK6Q6UWN8 80 aa3.52□□□□□ -1.85
CTNNA1-219ENST00000520158 RPL39LQ96EH5 51 aaKnown RBP3.52□□□□□ -1.85
CTNNA1-219ENST00000520158 SND1-IT1Q9HBX3 110 aa3.52□□□□□ -1.85
CTNNA1-219ENST00000520158 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.51□□□□□ -1.85
CTNNA1-219ENST00000520158 A0A096LNI7 61 aa3.51□□□□□ -1.85
CTNNA1-219ENST00000520158 A0A1B0GW54 56 aa3.51□□□□□ -1.85
CTNNA1-219ENST00000520158 IGKV2-29A2NJV5 120 aaPredicted RBP3.51□□□□□ -1.85
CTNNA1-219ENST00000520158 LEPROTO15243 131 aa3.51□□□□□ -1.85
CTNNA1-219ENST00000520158 TSHBP01222 138 aa3.51□□□□□ -1.85
CTNNA1-219ENST00000520158 HIGD2BQ4VC39 106 aa3.51□□□□□ -1.85
CTNNA1-219ENST00000520158 CDC42SE1Q9NRR8 79 aa3.51□□□□□ -1.85
CTNNA1-219ENST00000520158 SNURFQ9Y675 71 aa3.51□□□□□ -1.85
CTNNA1-219ENST00000520158 TRAV23DV6A0A075B6W5 121 aa3.5□□□□□ -1.85
CTNNA1-219ENST00000520158 IGKV3OR2-268A0A0C4DH90 116 aa3.5□□□□□ -1.85
CTNNA1-219ENST00000520158 A0A1B0GUT8 65 aa3.5□□□□□ -1.85
CTNNA1-219ENST00000520158 F8VRH5 84 aa3.5□□□□□ -1.85
CTNNA1-219ENST00000520158 GAS8-AS1O95177 125 aa3.5□□□□□ -1.85
CTNNA1-219ENST00000520158 PPP1R17O96001 155 aa3.5□□□□□ -1.85
CTNNA1-219ENST00000520158 C9orf116Q5BN46 136 aaPredicted RBP3.5□□□□□ -1.85
CTNNA1-219ENST00000520158 ADAMTSL4-AS1Q5T5F5 129 aa3.5□□□□□ -1.85
CTNNA1-219ENST00000520158 RNF213Q63HN8 5207 aa3.5□□□□□ -1.85
CTNNA1-219ENST00000520158 IGKV2-24A0A0C4DH68 120 aa3.49□□□□□ -1.85
CTNNA1-219ENST00000520158 C11orf86A6NJI1 115 aa3.49□□□□□ -1.85
CTNNA1-219ENST00000520158 REG3GQ6UW15 175 aa3.49□□□□□ -1.85
CTNNA1-219ENST00000520158 LIMD2Q9BT23 127 aa3.49□□□□□ -1.85
CTNNA1-219ENST00000520158 IGLV4-69A0A075B6H9 119 aa3.48□□□□□ -1.85
CTNNA1-219ENST00000520158 TRBV7-4A0A0J9YYF1 115 aa3.48□□□□□ -1.85
CTNNA1-219ENST00000520158 A8MU10 97 aa3.48□□□□□ -1.85
CTNNA1-219ENST00000520158 CHKB-CPT1BH3BT56 60 aa3.48□□□□□ -1.85
CTNNA1-219ENST00000520158 DNAL4O96015 105 aa3.48□□□□□ -1.85
CTNNA1-219ENST00000520158 BAALC-AS2P0C853 105 aa3.48□□□□□ -1.85
CTNNA1-219ENST00000520158 LINC00846Q9NV44 126 aa3.48□□□□□ -1.85
CTNNA1-219ENST00000520158 A0A1W2PNN7 141 aa3.47□□□□□ -1.85
CTNNA1-219ENST00000520158 D6R8Y8 96 aa3.47□□□□□ -1.85
CTNNA1-219ENST00000520158 H7C2G1 150 aa3.47□□□□□ -1.85
CTNNA1-219ENST00000520158 MOBPQ13875 183 aa3.47□□□□□ -1.85
CTNNA1-219ENST00000520158 FAM104AQ969W3 186 aa3.47□□□□□ -1.85
CTNNA1-219ENST00000520158 OBSCN-AS1Q96MR7 158 aa3.47□□□□□ -1.85
CTNNA1-219ENST00000520158 LRP2P98164 4655 aa3.47□□□□□ -1.85
CTNNA1-219ENST00000520158 IGLV9-49A0A0B4J1Y8 123 aa3.46□□□□□ -1.86
CTNNA1-219ENST00000520158 TLX1NBP0CAT3 122 aa3.46□□□□□ -1.86
CTNNA1-219ENST00000520158 MUSTN1Q8IVN3 82 aa3.46□□□□□ -1.86
CTNNA1-219ENST00000520158 TMEM254Q8TBM7 123 aa3.46□□□□□ -1.86
CTNNA1-219ENST00000520158 RETNLBQ9BQ08 111 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms