RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 SMIM11BQ8TCY0 68 aa4.89□□□□□ -1.63
TRIM35-202ENST00000519219 TRBV10-3A0A0K0K1G6 114 aa4.88□□□□□ -1.63
TRIM35-202ENST00000519219 UBE2V1Q13404 147 aa4.88□□□□□ -1.63
TRIM35-202ENST00000519219 SPAG11AQ6PDA7 123 aa4.88□□□□□ -1.63
TRIM35-202ENST00000519219 SNCGO76070 127 aa4.87□□□□□ -1.63
TRIM35-202ENST00000519219 H0YGX0 51 aa4.86□□□□□ -1.63
TRIM35-202ENST00000519219 TCL1BO95988 128 aa4.86□□□□□ -1.63
TRIM35-202ENST00000519219 DNAL4O96015 105 aa4.86□□□□□ -1.63
TRIM35-202ENST00000519219 IGLV6-57P01721 117 aa4.86□□□□□ -1.63
TRIM35-202ENST00000519219 KRTAP19-2Q3LHN2 52 aa4.86□□□□□ -1.63
TRIM35-202ENST00000519219 C6orf99Q4VX62 202 aa4.86□□□□□ -1.63
TRIM35-202ENST00000519219 C4orf48Q5BLP8 95 aa4.86□□□□□ -1.63
TRIM35-202ENST00000519219 SMCR5Q8TEV8 140 aa4.86□□□□□ -1.63
TRIM35-202ENST00000519219 CLEC2BQ92478 149 aa4.86□□□□□ -1.63
TRIM35-202ENST00000519219 KRTAP4-16G5E9R7 235 aaPredicted RBP4.85□□□□□ -1.63
TRIM35-202ENST00000519219 H3BMG7 143 aa4.85□□□□□ -1.63
TRIM35-202ENST00000519219 ZNF73O43830 326 aaPredicted RBP4.85□□□□□ -1.63
TRIM35-202ENST00000519219 ERC2-IT1O76042 136 aa4.85□□□□□ -1.63
TRIM35-202ENST00000519219 Q8N377 158 aa4.85□□□□□ -1.63
TRIM35-202ENST00000519219 LST1O00453 97 aa4.84□□□□□ -1.63
TRIM35-202ENST00000519219 PRYO14603 147 aa4.84□□□□□ -1.63
TRIM35-202ENST00000519219 SLC25A20O43772 301 aa4.84□□□□□ -1.63
TRIM35-202ENST00000519219 SPINK1P00995 79 aa4.84□□□□□ -1.63
TRIM35-202ENST00000519219 COX7BP24311 80 aa4.84□□□□□ -1.63
TRIM35-202ENST00000519219 SPRR1AP35321 89 aa4.84□□□□□ -1.63
TRIM35-202ENST00000519219 SEC61BP60468 96 aaKnown RBP4.84□□□□□ -1.63
TRIM35-202ENST00000519219 MOBPQ13875 183 aa4.84□□□□□ -1.63
TRIM35-202ENST00000519219 LINC00483Q53H64 154 aa4.84□□□□□ -1.63
TRIM35-202ENST00000519219 ZNF706Q9Y5V0 76 aaPredicted RBP4.84□□□□□ -1.63
TRIM35-202ENST00000519219 IGLV9-49A0A0B4J1Y8 123 aa4.83□□□□□ -1.64
TRIM35-202ENST00000519219 ETDCA0A1B0GVM5 59 aa4.83□□□□□ -1.64
TRIM35-202ENST00000519219 C9JAW5 83 aa4.83□□□□□ -1.64
TRIM35-202ENST00000519219 XP32Q5T750 250 aa4.83□□□□□ -1.64
TRIM35-202ENST00000519219 GAGE2AQ6NT46 116 aa4.83□□□□□ -1.64
TRIM35-202ENST00000519219 MT1HP80294 61 aa4.82□□□□□ -1.64
TRIM35-202ENST00000519219 MTURNQ8N3F0 131 aa4.82□□□□□ -1.64
TRIM35-202ENST00000519219 KCNQ1DNQ9H478 68 aa4.82□□□□□ -1.64
TRIM35-202ENST00000519219 TRBV7-6A0A0J9YX20 115 aa4.81□□□□□ -1.64
TRIM35-202ENST00000519219 B5MCH6 92 aa4.81□□□□□ -1.64
TRIM35-202ENST00000519219 F8W1H4 67 aa4.81□□□□□ -1.64
TRIM35-202ENST00000519219 TRACP01848 142 aa4.81□□□□□ -1.64
TRIM35-202ENST00000519219 Q9BRP9 147 aa4.81□□□□□ -1.64
TRIM35-202ENST00000519219 A0A1B0GX51 115 aa4.8□□□□□ -1.64
TRIM35-202ENST00000519219 hADV29S1A0JD25 119 aa4.8□□□□□ -1.64
TRIM35-202ENST00000519219 ELOF1P60002 83 aaKnown RBP4.8□□□□□ -1.64
TRIM35-202ENST00000519219 FAM218AQ96MZ4 157 aa4.8□□□□□ -1.64
TRIM35-202ENST00000519219 H3BT86 120 aa4.79□□□□□ -1.64
TRIM35-202ENST00000519219 ORMDL1Q9P0S3 153 aa4.79□□□□□ -1.64
TRIM35-202ENST00000519219 GHRHP01286 108 aa4.78□□□□□ -1.64
TRIM35-202ENST00000519219 RPS29P62273 56 aaKnown RBP4.78□□□□□ -1.64
TRIM35-202ENST00000519219 LINC00575Q6W349 94 aa4.78□□□□□ -1.64
TRIM35-202ENST00000519219 ANKRD29Q8N6D5 301 aa4.78□□□□□ -1.64
TRIM35-202ENST00000519219 DHRS4-AS1Q9P1J3 65 aa4.78□□□□□ -1.64
TRIM35-202ENST00000519219 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.77□□□□□ -1.65
TRIM35-202ENST00000519219 PCOTHQ58A44 107 aa4.77□□□□□ -1.65
TRIM35-202ENST00000519219 Q6ZRX8 168 aa4.77□□□□□ -1.65
TRIM35-202ENST00000519219 SSBP3-AS1Q7Z2R9 100 aa4.77□□□□□ -1.65
TRIM35-202ENST00000519219 H3BQ85 93 aa4.76□□□□□ -1.65
TRIM35-202ENST00000519219 BAALC-AS2P0C853 105 aa4.76□□□□□ -1.65
TRIM35-202ENST00000519219 LORP23490 312 aaPredicted RBP4.76□□□□□ -1.65
TRIM35-202ENST00000519219 Q6ZQY7 126 aa4.76□□□□□ -1.65
TRIM35-202ENST00000519219 ST20-AS1Q8NBB2 130 aa4.76□□□□□ -1.65
TRIM35-202ENST00000519219 PRO0461Q9UI25 63 aa4.76□□□□□ -1.65
TRIM35-202ENST00000519219 KRTAP10-6P60371 365 aaPredicted RBP4.75□□□□□ -1.65
TRIM35-202ENST00000519219 ETDBQ3ZM63 59 aa4.75□□□□□ -1.65
TRIM35-202ENST00000519219 OCIAD2Q56VL3 154 aa4.75□□□□□ -1.65
TRIM35-202ENST00000519219 C9orf153Q5TBE3 101 aa4.75□□□□□ -1.65
TRIM35-202ENST00000519219 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.75□□□□□ -1.65
TRIM35-202ENST00000519219 IGLV8-61A0A075B6I0 122 aa4.74□□□□□ -1.65
TRIM35-202ENST00000519219 C9orf92A6NGG3 77 aa4.74□□□□□ -1.65
TRIM35-202ENST00000519219 TMEM256-PLSCR3K7ERE1 68 aa4.74□□□□□ -1.65
TRIM35-202ENST00000519219 TEN1Q86WV5 123 aa4.74□□□□□ -1.65
TRIM35-202ENST00000519219 J3QR89 54 aa4.73□□□□□ -1.65
TRIM35-202ENST00000519219 SMCPP49901 116 aaPredicted RBP4.73□□□□□ -1.65
TRIM35-202ENST00000519219 HRCT1Q6UXD1 115 aa4.73□□□□□ -1.65
TRIM35-202ENST00000519219 DEFB105AQ8NG35 78 aa4.73□□□□□ -1.65
TRIM35-202ENST00000519219 LAMTOR3Q9UHA4 124 aa4.73□□□□□ -1.65
TRIM35-202ENST00000519219 A0A1B0GV72 72 aa4.72□□□□□ -1.65
TRIM35-202ENST00000519219 PPDPFLQ8WWR9 84 aa4.72□□□□□ -1.65
TRIM35-202ENST00000519219 FLGP20930 4061 aaPredicted RBP4.72□□□□□ -1.65
TRIM35-202ENST00000519219 K7ERU9 68 aa4.71□□□□□ -1.66
TRIM35-202ENST00000519219 TEX49A0A1B0GTD5 131 aa4.7□□□□□ -1.66
TRIM35-202ENST00000519219 F8WEM9 126 aa4.7□□□□□ -1.66
TRIM35-202ENST00000519219 JMJD7-PLA2G4BH0Y9G9 81 aa4.7□□□□□ -1.66
TRIM35-202ENST00000519219 DSCR8Q96T75 97 aa4.68□□□□□ -1.66
TRIM35-202ENST00000519219 NDUFV3P56181 108 aaKnown RBP4.67□□□□□ -1.66
TRIM35-202ENST00000519219 RBM3P98179 157 aaKnown RBP4.67□□□□□ -1.66
TRIM35-202ENST00000519219 C14orf132Q9NPU4 83 aa4.67□□□□□ -1.66
TRIM35-202ENST00000519219 IGLV5-48A0A075B6I7 105 aa4.66□□□□□ -1.66
TRIM35-202ENST00000519219 A0A0G2JQZ4 141 aa4.66□□□□□ -1.66
TRIM35-202ENST00000519219 SPRR1BP22528 89 aa4.66□□□□□ -1.66
TRIM35-202ENST00000519219 M0R2T5 61 aa4.65□□□□□ -1.67
TRIM35-202ENST00000519219 VPS25Q9BRG1 176 aa4.65□□□□□ -1.67
TRIM35-202ENST00000519219 LIMD2Q9BT23 127 aa4.65□□□□□ -1.67
TRIM35-202ENST00000519219 PDE6GP18545 87 aa4.64□□□□□ -1.67
TRIM35-202ENST00000519219 C21orf62-AS1Q17RA5 79 aa4.64□□□□□ -1.67
TRIM35-202ENST00000519219 C1orf195Q5TG92 126 aa4.63□□□□□ -1.67
TRIM35-202ENST00000519219 OBSCN-AS1Q96MR7 158 aa4.63□□□□□ -1.67
TRIM35-202ENST00000519219 LOC110117498A0A087WWA1 95 aa4.62□□□□□ -1.67
TRIM35-202ENST00000519219 ACYP1P07311 99 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms