RNA–Protein interactions for RNA: ENST00000518689.5

VEGFA-218, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 630 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-218ENST00000518689 S100A6P06703 90 aa6.71□□□□□ -1.34
VEGFA-218ENST00000518689 VAMP3Q15836 100 aa6.7□□□□□ -1.34
VEGFA-218ENST00000518689 PCOTHQ58A44 107 aa6.7□□□□□ -1.34
VEGFA-218ENST00000518689 KRTAP19-2Q3LHN2 52 aa6.69□□□□□ -1.34
VEGFA-218ENST00000518689 hADV29S1A0JD25 119 aa6.68□□□□□ -1.34
VEGFA-218ENST00000518689 SCGB1D1O95968 90 aa6.68□□□□□ -1.34
VEGFA-218ENST00000518689 LORP23490 312 aaPredicted RBP6.68□□□□□ -1.34
VEGFA-218ENST00000518689 Q6ZQY7 126 aa6.68□□□□□ -1.34
VEGFA-218ENST00000518689 COX8AP10176 69 aa6.67□□□□□ -1.34
VEGFA-218ENST00000518689 C12orf57Q99622 126 aa6.67□□□□□ -1.34
VEGFA-218ENST00000518689 IGLV8-61A0A075B6I0 122 aa6.66□□□□□ -1.34
VEGFA-218ENST00000518689 HIST1H4GQ99525 98 aa6.66□□□□□ -1.34
VEGFA-218ENST00000518689 DLEU1O43261 78 aa6.65□□□□□ -1.34
VEGFA-218ENST00000518689 F8WEM9 126 aa6.64□□□□□ -1.35
VEGFA-218ENST00000518689 IGFL1Q6UW32 110 aa6.64□□□□□ -1.35
VEGFA-218ENST00000518689 TCL1BO95988 128 aa6.63□□□□□ -1.35
VEGFA-218ENST00000518689 OCIAD2Q56VL3 154 aa6.63□□□□□ -1.35
VEGFA-218ENST00000518689 Q6JHZ5 121 aa6.63□□□□□ -1.35
VEGFA-218ENST00000518689 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.63□□□□□ -1.35
VEGFA-218ENST00000518689 CFC1BP0CG36 223 aa6.62□□□□□ -1.35
VEGFA-218ENST00000518689 CFC1P0CG37 223 aa6.62□□□□□ -1.35
VEGFA-218ENST00000518689 BVES-AS1Q5T3Y7 98 aa6.62□□□□□ -1.35
VEGFA-218ENST00000518689 CLEC2BQ92478 149 aa6.62□□□□□ -1.35
VEGFA-218ENST00000518689 C14orf144Q96I85 54 aa6.62□□□□□ -1.35
VEGFA-218ENST00000518689 TRBV7-7A0A0K0K1E9 115 aa6.61□□□□□ -1.35
VEGFA-218ENST00000518689 RPL37P61927 97 aaKnown RBP6.61□□□□□ -1.35
VEGFA-218ENST00000518689 PPDPFLQ8WWR9 84 aa6.6□□□□□ -1.35
VEGFA-218ENST00000518689 HIGD1BQ9P298 99 aa6.6□□□□□ -1.35
VEGFA-218ENST00000518689 MT1HP80294 61 aa6.59□□□□□ -1.35
VEGFA-218ENST00000518689 C2orf91Q6ZV80 131 aa6.59□□□□□ -1.35
VEGFA-218ENST00000518689 PAM16Q9Y3D7 125 aa6.59□□□□□ -1.35
VEGFA-218ENST00000518689 SPATA45Q537H7 98 aa6.58□□□□□ -1.36
VEGFA-218ENST00000518689 A0A0B4J2C4 111 aa6.57□□□□□ -1.36
VEGFA-218ENST00000518689 H3BUT2 72 aa6.57□□□□□ -1.36
VEGFA-218ENST00000518689 FAM218AQ96MZ4 157 aa6.57□□□□□ -1.36
VEGFA-218ENST00000518689 SNHG12Q9BXW3 62 aa6.57□□□□□ -1.36
VEGFA-218ENST00000518689 RAB37Q96AX2 223 aa6.56□□□□□ -1.36
VEGFA-218ENST00000518689 KRTAP9-6A0A140TA67 174 aa6.55□□□□□ -1.36
VEGFA-218ENST00000518689 H0YGX0 51 aa6.55□□□□□ -1.36
VEGFA-218ENST00000518689 VAMP8Q9BV40 100 aa6.55□□□□□ -1.36
VEGFA-218ENST00000518689 CEND1Q8N111 149 aa6.53□□□□□ -1.36
VEGFA-218ENST00000518689 NDUFV3P56181 108 aaKnown RBP6.52□□□□□ -1.37
VEGFA-218ENST00000518689 Q6Q795 121 aa6.52□□□□□ -1.37
VEGFA-218ENST00000518689 FXYD2P54710 66 aa6.51□□□□□ -1.37
VEGFA-218ENST00000518689 OBSCN-AS1Q96MR7 158 aa6.51□□□□□ -1.37
VEGFA-218ENST00000518689 PRO1854Q9UHT4 67 aa6.51□□□□□ -1.37
VEGFA-218ENST00000518689 LST1O00453 97 aa6.5□□□□□ -1.37
VEGFA-218ENST00000518689 SNCGO76070 127 aa6.5□□□□□ -1.37
VEGFA-218ENST00000518689 FLGP20930 4061 aaPredicted RBP6.5□□□□□ -1.37
VEGFA-218ENST00000518689 Q75L30 129 aa6.49□□□□□ -1.37
VEGFA-218ENST00000518689 TEN1Q86WV5 123 aa6.49□□□□□ -1.37
VEGFA-218ENST00000518689 A0A1B0GX51 115 aa6.48□□□□□ -1.37
VEGFA-218ENST00000518689 H3BMG7 143 aa6.47□□□□□ -1.37
VEGFA-218ENST00000518689 TRIAP1O43715 76 aa6.47□□□□□ -1.37
VEGFA-218ENST00000518689 KRTAP10-6P60371 365 aaPredicted RBP6.46□□□□□ -1.38
VEGFA-218ENST00000518689 PYY3Q5JQD4 70 aa6.46□□□□□ -1.38
VEGFA-218ENST00000518689 Q96NJ1 140 aa6.46□□□□□ -1.38
VEGFA-218ENST00000518689 SS18L2Q9UHA2 77 aa6.46□□□□□ -1.38
VEGFA-218ENST00000518689 A0A087WSZ3 146 aa6.45□□□□□ -1.38
VEGFA-218ENST00000518689 LOC105371267A0A1B0GV96 52 aa6.45□□□□□ -1.38
VEGFA-218ENST00000518689 A0A1W2PNM2 257 aa6.44□□□□□ -1.38
VEGFA-218ENST00000518689 FABP2P12104 132 aa6.44□□□□□ -1.38
VEGFA-218ENST00000518689 COX6B2Q6YFQ2 88 aa6.44□□□□□ -1.38
VEGFA-218ENST00000518689 ATP11AUNQ6ZP68 121 aa6.44□□□□□ -1.38
VEGFA-218ENST00000518689 HSD52Q0P140 79 aa6.42□□□□□ -1.38
VEGFA-218ENST00000518689 C20orf166-AS1Q96NR2 134 aa6.42□□□□□ -1.38
VEGFA-218ENST00000518689 A8MUU9 505 aa6.41□□□□□ -1.38
VEGFA-218ENST00000518689 K7ERJ3 54 aa6.41□□□□□ -1.38
VEGFA-218ENST00000518689 FSIP2Q5CZC0 6907 aa6.4□□□□□ -1.38
VEGFA-218ENST00000518689 M0R2T5 61 aa6.4□□□□□ -1.38
VEGFA-218ENST00000518689 CRCT1Q9UGL9 99 aa6.4□□□□□ -1.38
VEGFA-218ENST00000518689 ORMDL1Q9P0S3 153 aa6.39□□□□□ -1.39
VEGFA-218ENST00000518689 PSMB2P49721 201 aa6.38□□□□□ -1.39
VEGFA-218ENST00000518689 TRBV7-4A0A0J9YYF1 115 aa6.37□□□□□ -1.39
VEGFA-218ENST00000518689 A0A1B0GV72 72 aa6.37□□□□□ -1.39
VEGFA-218ENST00000518689 DNAL4O96015 105 aa6.37□□□□□ -1.39
VEGFA-218ENST00000518689 DSCR10P59022 87 aa6.37□□□□□ -1.39
VEGFA-218ENST00000518689 ANKRD29Q8N6D5 301 aa6.37□□□□□ -1.39
VEGFA-218ENST00000518689 H3BQ85 93 aa6.36□□□□□ -1.39
VEGFA-218ENST00000518689 TMEM256-PLSCR3K7ERE1 68 aa6.35□□□□□ -1.39
VEGFA-218ENST00000518689 COX6CP09669 75 aa6.35□□□□□ -1.39
VEGFA-218ENST00000518689 UQCR10Q9UDW1 63 aa6.35□□□□□ -1.39
VEGFA-218ENST00000518689 KRTAP16-1A8MUX0 517 aa6.34□□□□□ -1.39
VEGFA-218ENST00000518689 SIGMAR1Q99720 223 aa6.34□□□□□ -1.39
VEGFA-218ENST00000518689 IGKV4-1P06312 121 aa6.33□□□□□ -1.4
VEGFA-218ENST00000518689 NOTCH2NLQ7Z3S9 236 aa6.33□□□□□ -1.4
VEGFA-218ENST00000518689 LINC00472Q9H8W2 130 aa6.33□□□□□ -1.4
VEGFA-218ENST00000518689 CCKP06307 115 aa6.32□□□□□ -1.4
VEGFA-218ENST00000518689 LINC00313P59037 77 aa6.32□□□□□ -1.4
VEGFA-218ENST00000518689 UBE2V1Q13404 147 aa6.32□□□□□ -1.4
VEGFA-218ENST00000518689 DEFB116Q30KQ4 102 aa6.32□□□□□ -1.4
VEGFA-218ENST00000518689 TRACP01848 142 aa6.31□□□□□ -1.4
VEGFA-218ENST00000518689 SCGB1C2P0DMR2 95 aa6.27□□□□□ -1.41
VEGFA-218ENST00000518689 TRBV20-1A0A075B6N2 111 aa6.26□□□□□ -1.41
VEGFA-218ENST00000518689 RBM3P98179 157 aaKnown RBP6.26□□□□□ -1.41
VEGFA-218ENST00000518689 IGHV6-1A0A0B4J1U7 121 aa6.25□□□□□ -1.41
VEGFA-218ENST00000518689 PCP4P48539 62 aa6.25□□□□□ -1.41
VEGFA-218ENST00000518689 KRTAP9-8Q9BYQ0 159 aa6.25□□□□□ -1.41
VEGFA-218ENST00000518689 BAALC-AS2P0C853 105 aa6.24□□□□□ -1.41
VEGFA-218ENST00000518689 VPS25Q9BRG1 176 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms