RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 SLC7A5P1Q8MH63 180 aa4.39□□□□□ -1.71
PVT1-207ENST00000518528 MTURNQ8N3F0 131 aa4.39□□□□□ -1.71
PVT1-207ENST00000518528 COPS9Q8WXC6 57 aa4.39□□□□□ -1.71
PVT1-207ENST00000518528 E9PLD3 99 aa4.38□□□□□ -1.71
PVT1-207ENST00000518528 CLLU1Q5K131 121 aa4.38□□□□□ -1.71
PVT1-207ENST00000518528 A6NDN8 102 aa4.37□□□□□ -1.71
PVT1-207ENST00000518528 Q6ZVH6 145 aa4.37□□□□□ -1.71
PVT1-207ENST00000518528 LITAFQ99732 161 aa4.37□□□□□ -1.71
PVT1-207ENST00000518528 PMCHL2Q9BQD1 86 aa4.37□□□□□ -1.71
PVT1-207ENST00000518528 KRTAP3-3Q9BYR6 98 aa4.37□□□□□ -1.71
PVT1-207ENST00000518528 KRTAP3-2Q9BYR7 98 aa4.37□□□□□ -1.71
PVT1-207ENST00000518528 SS18L2Q9UHA2 77 aa4.37□□□□□ -1.71
PVT1-207ENST00000518528 SERF1AO75920 110 aa4.36□□□□□ -1.71
PVT1-207ENST00000518528 OCIAD2Q56VL3 154 aa4.36□□□□□ -1.71
PVT1-207ENST00000518528 VAMP3Q15836 100 aa4.35□□□□□ -1.71
PVT1-207ENST00000518528 A8MWP4 228 aa4.34□□□□□ -1.71
PVT1-207ENST00000518528 MPLKIPQ8TAP9 179 aa4.34□□□□□ -1.71
PVT1-207ENST00000518528 SCGB1D1O95968 90 aa4.33□□□□□ -1.72
PVT1-207ENST00000518528 HRES1P13985 223 aa4.33□□□□□ -1.72
PVT1-207ENST00000518528 FABP4P15090 132 aa4.33□□□□□ -1.72
PVT1-207ENST00000518528 IFITM1P13164 125 aa4.32□□□□□ -1.72
PVT1-207ENST00000518528 DSCR10P59022 87 aa4.31□□□□□ -1.72
PVT1-207ENST00000518528 Q6ZQY7 126 aa4.31□□□□□ -1.72
PVT1-207ENST00000518528 SNHG12Q9BXW3 62 aa4.31□□□□□ -1.72
PVT1-207ENST00000518528 hADV29S1A0JD25 119 aa4.3□□□□□ -1.72
PVT1-207ENST00000518528 ANKRD39Q53RE8 183 aa4.3□□□□□ -1.72
PVT1-207ENST00000518528 LINC00575Q6W349 94 aa4.3□□□□□ -1.72
PVT1-207ENST00000518528 SCGB1D4Q6XE38 83 aa4.3□□□□□ -1.72
PVT1-207ENST00000518528 SMIM11BQ8TCY0 68 aa4.3□□□□□ -1.72
PVT1-207ENST00000518528 LINC00313P59037 77 aa4.29□□□□□ -1.72
PVT1-207ENST00000518528 Q8N9P0 234 aaPredicted RBP4.29□□□□□ -1.72
PVT1-207ENST00000518528 PPDPFLQ8WWR9 84 aa4.29□□□□□ -1.72
PVT1-207ENST00000518528 KRTAP16-1A8MUX0 517 aa4.28□□□□□ -1.72
PVT1-207ENST00000518528 SNAPINO95295 136 aa4.28□□□□□ -1.72
PVT1-207ENST00000518528 NDUFA5Q16718 116 aa4.28□□□□□ -1.72
PVT1-207ENST00000518528 NOTCH2NLQ7Z3S9 236 aa4.28□□□□□ -1.72
PVT1-207ENST00000518528 SIGMAR1Q99720 223 aa4.28□□□□□ -1.72
PVT1-207ENST00000518528 MUC12Q9UKN1 5478 aa4.27□□□□□ -1.73
PVT1-207ENST00000518528 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.27□□□□□ -1.73
PVT1-207ENST00000518528 SVBPQ8N300 66 aa4.27□□□□□ -1.73
PVT1-207ENST00000518528 H3BUT2 72 aa4.26□□□□□ -1.73
PVT1-207ENST00000518528 GHRHP01286 108 aa4.26□□□□□ -1.73
PVT1-207ENST00000518528 APOC3P02656 99 aa4.26□□□□□ -1.73
PVT1-207ENST00000518528 TEN1Q86WV5 123 aa4.26□□□□□ -1.73
PVT1-207ENST00000518528 A0A087WSZ3 146 aa4.25□□□□□ -1.73
PVT1-207ENST00000518528 COLCA2A8K830 154 aa4.25□□□□□ -1.73
PVT1-207ENST00000518528 MUSTN1Q8IVN3 82 aa4.25□□□□□ -1.73
PVT1-207ENST00000518528 SYS1-DBNDD2H3BUS1 97 aa4.24□□□□□ -1.73
PVT1-207ENST00000518528 LINC00310P59036 64 aa4.24□□□□□ -1.73
PVT1-207ENST00000518528 TTTY13Q9BZ97 58 aa4.24□□□□□ -1.73
PVT1-207ENST00000518528 TRGC2P03986 189 aa4.23□□□□□ -1.73
PVT1-207ENST00000518528 YPEL4Q96NS1 127 aa4.23□□□□□ -1.73
PVT1-207ENST00000518528 C12orf57Q99622 126 aa4.23□□□□□ -1.73
PVT1-207ENST00000518528 A6NN06 94 aa4.22□□□□□ -1.73
PVT1-207ENST00000518528 SNCGO76070 127 aa4.22□□□□□ -1.73
PVT1-207ENST00000518528 IGKV4-1P06312 121 aa4.21□□□□□ -1.74
PVT1-207ENST00000518528 LINC01545Q5VT33 79 aa4.21□□□□□ -1.74
PVT1-207ENST00000518528 PET117Q6UWS5 81 aa4.21□□□□□ -1.74
PVT1-207ENST00000518528 KRTAP2-3P0C7H8 128 aa4.19□□□□□ -1.74
PVT1-207ENST00000518528 SPINK7P58062 85 aa4.19□□□□□ -1.74
PVT1-207ENST00000518528 BVES-AS1Q5T3Y7 98 aa4.19□□□□□ -1.74
PVT1-207ENST00000518528 KRTAP2-4Q9BYR9 128 aa4.19□□□□□ -1.74
PVT1-207ENST00000518528 IGHV6-1A0A0B4J1U7 121 aa4.17□□□□□ -1.74
PVT1-207ENST00000518528 C3orf79P0CE67 100 aa4.17□□□□□ -1.74
PVT1-207ENST00000518528 NDUFV3P56181 108 aaKnown RBP4.17□□□□□ -1.74
PVT1-207ENST00000518528 FAM218AQ96MZ4 157 aa4.17□□□□□ -1.74
PVT1-207ENST00000518528 MDN1Q9NU22 5596 aa4.17□□□□□ -1.74
PVT1-207ENST00000518528 KRTAP5-9P26371 169 aa4.16□□□□□ -1.74
PVT1-207ENST00000518528 WFDC13Q8IUB5 93 aa4.16□□□□□ -1.74
PVT1-207ENST00000518528 ZCCHC13Q8WW36 166 aaKnown RBP4.16□□□□□ -1.74
PVT1-207ENST00000518528 A0A1W2PNM2 257 aa4.15□□□□□ -1.75
PVT1-207ENST00000518528 H3BMG7 143 aa4.15□□□□□ -1.75
PVT1-207ENST00000518528 C8orf87E5RJ46 101 aa4.14□□□□□ -1.75
PVT1-207ENST00000518528 KMT2DO14686 5537 aa4.14□□□□□ -1.75
PVT1-207ENST00000518528 LYRM7Q5U5X0 104 aa4.12□□□□□ -1.75
PVT1-207ENST00000518528 TRBV7-4A0A0J9YYF1 115 aa4.11□□□□□ -1.75
PVT1-207ENST00000518528 FABP2P12104 132 aa4.11□□□□□ -1.75
PVT1-207ENST00000518528 SMCPP49901 116 aaPredicted RBP4.11□□□□□ -1.75
PVT1-207ENST00000518528 KRTDAPP60985 99 aa4.11□□□□□ -1.75
PVT1-207ENST00000518528 DEFB116Q30KQ4 102 aa4.11□□□□□ -1.75
PVT1-207ENST00000518528 H1FX-AS1Q4G0G2 97 aa4.11□□□□□ -1.75
PVT1-207ENST00000518528 RAB37Q96AX2 223 aa4.11□□□□□ -1.75
PVT1-207ENST00000518528 Q5VV11 94 aa4.1□□□□□ -1.75
PVT1-207ENST00000518528 ANKRD29Q8N6D5 301 aa4.1□□□□□ -1.75
PVT1-207ENST00000518528 A0A1B0GVX0 72 aa4.09□□□□□ -1.75
PVT1-207ENST00000518528 H0YGX0 51 aa4.09□□□□□ -1.75
PVT1-207ENST00000518528 DSCR8Q96T75 97 aa4.09□□□□□ -1.75
PVT1-207ENST00000518528 LINC00472Q9H8W2 130 aa4.09□□□□□ -1.75
PVT1-207ENST00000518528 SNRPEP62304 92 aaKnown RBP4.08□□□□□ -1.76
PVT1-207ENST00000518528 TRACP01848 142 aa4.07□□□□□ -1.76
PVT1-207ENST00000518528 ATOH7Q8N100 152 aa4.07□□□□□ -1.76
PVT1-207ENST00000518528 FAM236AA0A1B0GUQ0 79 aa4.06□□□□□ -1.76
PVT1-207ENST00000518528 FAM236BA0A1B0GV22 79 aa4.06□□□□□ -1.76
PVT1-207ENST00000518528 KRTAP10-5P60370 271 aa4.06□□□□□ -1.76
PVT1-207ENST00000518528 A0A1B0GX51 115 aa4.05□□□□□ -1.76
PVT1-207ENST00000518528 HIST1H2BKO60814 126 aa4.05□□□□□ -1.76
PVT1-207ENST00000518528 HIST1H2BJP06899 126 aa4.05□□□□□ -1.76
PVT1-207ENST00000518528 HIST1H2BOP23527 126 aa4.05□□□□□ -1.76
PVT1-207ENST00000518528 HIST1H2BBP33778 126 aa4.05□□□□□ -1.76
PVT1-207ENST00000518528 HIST1H2BDP58876 126 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms