RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 ANKRD29Q8N6D5 301 aa6.42□□□□□ -1.38
PABPC1-203ENST00000517921 KRTAP10-4P60372 401 aaPredicted RBP6.41□□□□□ -1.38
PABPC1-203ENST00000517921 H3BQ85 93 aa6.4□□□□□ -1.38
PABPC1-203ENST00000517921 FAM229AH3BQW9 127 aa6.4□□□□□ -1.38
PABPC1-203ENST00000517921 Q5VSD8 79 aa6.4□□□□□ -1.38
PABPC1-203ENST00000517921 Q8N377 158 aa6.4□□□□□ -1.38
PABPC1-203ENST00000517921 TMEM256-PLSCR3K7ERE1 68 aa6.39□□□□□ -1.39
PABPC1-203ENST00000517921 DEFB105AQ8NG35 78 aa6.39□□□□□ -1.39
PABPC1-203ENST00000517921 PPDPFLQ8WWR9 84 aa6.39□□□□□ -1.39
PABPC1-203ENST00000517921 SPRR4Q96PI1 79 aa6.39□□□□□ -1.39
PABPC1-203ENST00000517921 TEX49A0A1B0GTD5 131 aa6.38□□□□□ -1.39
PABPC1-203ENST00000517921 GHRHP01286 108 aa6.38□□□□□ -1.39
PABPC1-203ENST00000517921 SPRR1BP22528 89 aa6.38□□□□□ -1.39
PABPC1-203ENST00000517921 LORP23490 312 aaPredicted RBP6.38□□□□□ -1.39
PABPC1-203ENST00000517921 J3QR89 54 aa6.37□□□□□ -1.39
PABPC1-203ENST00000517921 ETDBQ3ZM63 59 aa6.37□□□□□ -1.39
PABPC1-203ENST00000517921 VPS25Q9BRG1 176 aa6.37□□□□□ -1.39
PABPC1-203ENST00000517921 ZNF706Q9Y5V0 76 aaPredicted RBP6.37□□□□□ -1.39
PABPC1-203ENST00000517921 LINC00483Q53H64 154 aa6.36□□□□□ -1.39
PABPC1-203ENST00000517921 GAGE2AQ6NT46 116 aa6.36□□□□□ -1.39
PABPC1-203ENST00000517921 SMIM29Q86T20 159 aa6.36□□□□□ -1.39
PABPC1-203ENST00000517921 TEN1Q86WV5 123 aa6.36□□□□□ -1.39
PABPC1-203ENST00000517921 C3orf22Q8N5N4 141 aa6.36□□□□□ -1.39
PABPC1-203ENST00000517921 NDUFV3P56181 108 aaKnown RBP6.35□□□□□ -1.39
PABPC1-203ENST00000517921 OBSCN-AS1Q96MR7 158 aa6.35□□□□□ -1.39
PABPC1-203ENST00000517921 A0A1B0GV72 72 aa6.34□□□□□ -1.39
PABPC1-203ENST00000517921 PLA2G1BP04054 148 aaKnown RBP6.34□□□□□ -1.39
PABPC1-203ENST00000517921 PCP4P48539 62 aa6.34□□□□□ -1.39
PABPC1-203ENST00000517921 SPINK6Q6UWN8 80 aa6.34□□□□□ -1.39
PABPC1-203ENST00000517921 LAMTOR3Q9UHA4 124 aa6.34□□□□□ -1.39
PABPC1-203ENST00000517921 ANAPC11Q9NYG5 84 aa6.32□□□□□ -1.4
PABPC1-203ENST00000517921 JMJD7-PLA2G4BH0Y9G9 81 aa6.31□□□□□ -1.4
PABPC1-203ENST00000517921 KRTAP1-4P0C5Y4 121 aa6.31□□□□□ -1.4
PABPC1-203ENST00000517921 F8WEM9 126 aa6.3□□□□□ -1.4
PABPC1-203ENST00000517921 C14orf132Q9NPU4 83 aa6.3□□□□□ -1.4
PABPC1-203ENST00000517921 FLG2Q5D862 2391 aaPredicted RBP6.3□□□□□ -1.4
PABPC1-203ENST00000517921 IGLV8-61A0A075B6I0 122 aa6.29□□□□□ -1.4
PABPC1-203ENST00000517921 TRBV7-4A0A0J9YYF1 115 aa6.29□□□□□ -1.4
PABPC1-203ENST00000517921 RBM3P98179 157 aaKnown RBP6.29□□□□□ -1.4
PABPC1-203ENST00000517921 DMBT1Q9UGM3 2413 aaPredicted RBP6.28□□□□□ -1.4
PABPC1-203ENST00000517921 FAT3Q8TDW7 4589 aa6.28□□□□□ -1.4
PABPC1-203ENST00000517921 FAM229BQ4G0N7 80 aa6.28□□□□□ -1.4
PABPC1-203ENST00000517921 LOC110117498A0A087WWA1 95 aa6.27□□□□□ -1.41
PABPC1-203ENST00000517921 IGLV9-49A0A0B4J1Y8 123 aa6.27□□□□□ -1.41
PABPC1-203ENST00000517921 SCGB1A1P11684 91 aa6.27□□□□□ -1.41
PABPC1-203ENST00000517921 LRP1Q07954 4544 aaKnown RBP6.26□□□□□ -1.41
PABPC1-203ENST00000517921 A0A087X002 238 aa6.26□□□□□ -1.41
PABPC1-203ENST00000517921 MOBPQ13875 183 aa6.26□□□□□ -1.41
PABPC1-203ENST00000517921 C9orf153Q5TBE3 101 aa6.26□□□□□ -1.41
PABPC1-203ENST00000517921 IGFL1Q6UW32 110 aa6.26□□□□□ -1.41
PABPC1-203ENST00000517921 Q6ZQT0 140 aa6.26□□□□□ -1.41
PABPC1-203ENST00000517921 DSCR8Q96T75 97 aa6.26□□□□□ -1.41
PABPC1-203ENST00000517921 KRTAP13-2Q52LG2 175 aa6.25□□□□□ -1.41
PABPC1-203ENST00000517921 Q8NBF4 154 aa6.25□□□□□ -1.41
PABPC1-203ENST00000517921 A0A0G2JQZ4 141 aa6.24□□□□□ -1.41
PABPC1-203ENST00000517921 Q6JHZ5 121 aa6.24□□□□□ -1.41
PABPC1-203ENST00000517921 SIGMAR1Q99720 223 aa6.24□□□□□ -1.41
PABPC1-203ENST00000517921 CCKP06307 115 aa6.23□□□□□ -1.41
PABPC1-203ENST00000517921 CRYGAP11844 174 aa6.23□□□□□ -1.41
PABPC1-203ENST00000517921 PDE6GP18545 87 aa6.23□□□□□ -1.41
PABPC1-203ENST00000517921 A0A1W2PNM2 257 aa6.22□□□□□ -1.41
PABPC1-203ENST00000517921 C21orf62-AS1Q17RA5 79 aa6.21□□□□□ -1.42
PABPC1-203ENST00000517921 MYCBP2O75592 4640 aa6.2□□□□□ -1.42
PABPC1-203ENST00000517921 SSBP3-AS1Q7Z2R9 100 aa6.2□□□□□ -1.42
PABPC1-203ENST00000517921 PRR26Q8N8Z3 221 aa6.2□□□□□ -1.42
PABPC1-203ENST00000517921 FAM240AA0A1B0GVK7 77 aa6.19□□□□□ -1.42
PABPC1-203ENST00000517921 KRTAP29-1A8MX34 341 aaPredicted RBP6.19□□□□□ -1.42
PABPC1-203ENST00000517921 TNXBP22105 4242 aa6.18□□□□□ -1.42
PABPC1-203ENST00000517921 Q6Q795 121 aa6.18□□□□□ -1.42
PABPC1-203ENST00000517921 TYMSOSQ8TAI1 123 aa6.18□□□□□ -1.42
PABPC1-203ENST00000517921 HERC1Q15751 4861 aa6.17□□□□□ -1.42
PABPC1-203ENST00000517921 OXTP01178 125 aa6.16□□□□□ -1.42
PABPC1-203ENST00000517921 CDIP1Q9H305 208 aa6.16□□□□□ -1.42
PABPC1-203ENST00000517921 TRBV7-7A0A0K0K1E9 115 aa6.15□□□□□ -1.42
PABPC1-203ENST00000517921 A0A1B0GW54 56 aa6.15□□□□□ -1.42
PABPC1-203ENST00000517921 ACYP1P07311 99 aa6.15□□□□□ -1.42
PABPC1-203ENST00000517921 CD164Q04900 197 aa6.15□□□□□ -1.42
PABPC1-203ENST00000517921 HRCT1Q6UXD1 115 aa6.15□□□□□ -1.42
PABPC1-203ENST00000517921 LINC00846Q9NV44 126 aa6.14□□□□□ -1.43
PABPC1-203ENST00000517921 A0A087WSZ3 146 aa6.13□□□□□ -1.43
PABPC1-203ENST00000517921 LINC00304Q8N9R0 145 aa6.12□□□□□ -1.43
PABPC1-203ENST00000517921 KRTAP10-8P60410 259 aa6.11□□□□□ -1.43
PABPC1-203ENST00000517921 Q6ZVQ6 151 aa6.1□□□□□ -1.43
PABPC1-203ENST00000517921 MT1HL1P0DM35 61 aa6.09□□□□□ -1.43
PABPC1-203ENST00000517921 SPAG11AQ6PDA7 123 aa6.09□□□□□ -1.43
PABPC1-203ENST00000517921 UBL5Q9BZL1 73 aa6.09□□□□□ -1.43
PABPC1-203ENST00000517921 SS18L2Q9UHA2 77 aa6.08□□□□□ -1.44
PABPC1-203ENST00000517921 SPINK1P00995 79 aa6.07□□□□□ -1.44
PABPC1-203ENST00000517921 MT-ATP8P03928 68 aa6.07□□□□□ -1.44
PABPC1-203ENST00000517921 NREPQ16612 68 aa6.07□□□□□ -1.44
PABPC1-203ENST00000517921 Q5XG85 94 aa6.07□□□□□ -1.44
PABPC1-203ENST00000517921 RPS29P62273 56 aaKnown RBP6.06□□□□□ -1.44
PABPC1-203ENST00000517921 Q96NJ1 140 aa6.06□□□□□ -1.44
PABPC1-203ENST00000517921 LIMD2Q9BT23 127 aa6.06□□□□□ -1.44
PABPC1-203ENST00000517921 LOC100996750A0A140TA64 210 aa6.05□□□□□ -1.44
PABPC1-203ENST00000517921 ASB16-AS1Q495Z4 193 aa6.05□□□□□ -1.44
PABPC1-203ENST00000517921 LINC00643Q86TS7 51 aa6.05□□□□□ -1.44
PABPC1-203ENST00000517921 KRTAP4-6Q9BYQ5 205 aa6.05□□□□□ -1.44
PABPC1-203ENST00000517921 LINC00472Q9H8W2 130 aa6.05□□□□□ -1.44
PABPC1-203ENST00000517921 UBR4Q5T4S7 5183 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms