RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 H0YJX3 145 aa-1.27□□□□□ -2.61
SCARNA1-201ENST00000517138 CTXN2P0C2S0 81 aa-1.27□□□□□ -2.61
SCARNA1-201ENST00000517138 COX4I1P13073 169 aa-1.27□□□□□ -2.61
SCARNA1-201ENST00000517138 IL7P13232 177 aa-1.27□□□□□ -2.61
SCARNA1-201ENST00000517138 SERPINB1P30740 379 aa-1.27□□□□□ -2.61
SCARNA1-201ENST00000517138 HSD17B12Q53GQ0 312 aa-1.27□□□□□ -2.61
SCARNA1-201ENST00000517138 DMAC1Q96GE9 116 aa-1.27□□□□□ -2.61
SCARNA1-201ENST00000517138 TRBV7-6A0A0J9YX20 115 aa-1.28□□□□□ -2.61
SCARNA1-201ENST00000517138 TRBV7-4A0A0J9YYF1 115 aa-1.28□□□□□ -2.61
SCARNA1-201ENST00000517138 A6NIN4 97 aa-1.28□□□□□ -2.61
SCARNA1-201ENST00000517138 M0R3E3 92 aa-1.28□□□□□ -2.61
SCARNA1-201ENST00000517138 HMGN4O00479 90 aa-1.28□□□□□ -2.61
SCARNA1-201ENST00000517138 CYB5AP00167 134 aa-1.28□□□□□ -2.61
SCARNA1-201ENST00000517138 CKS1BP61024 79 aa-1.28□□□□□ -2.61
SCARNA1-201ENST00000517138 ARHGAP5-AS1Q96IT6 56 aa-1.28□□□□□ -2.61
SCARNA1-201ENST00000517138 PARVGQ9HBI0 331 aa-1.28□□□□□ -2.61
SCARNA1-201ENST00000517138 FKBP11Q9NYL4 201 aa-1.28□□□□□ -2.61
SCARNA1-201ENST00000517138 PVALEFA0A1B0GWK0 134 aa-1.29□□□□□ -2.62
SCARNA1-201ENST00000517138 F8VRH5 84 aa-1.29□□□□□ -2.62
SCARNA1-201ENST00000517138 H3BUT2 72 aa-1.29□□□□□ -2.62
SCARNA1-201ENST00000517138 HMGN2P05204 90 aaKnown RBP-1.29□□□□□ -2.62
SCARNA1-201ENST00000517138 NMBP08949 121 aa-1.29□□□□□ -2.62
SCARNA1-201ENST00000517138 TRAPPC2P0DI81 140 aa-1.29□□□□□ -2.62
SCARNA1-201ENST00000517138 TRAPPC2BP0DI82 140 aa-1.29□□□□□ -2.62
SCARNA1-201ENST00000517138 PPP1R2P41236 205 aa-1.29□□□□□ -2.62
SCARNA1-201ENST00000517138 GUCA1AP43080 201 aaPredicted RBP-1.29□□□□□ -2.62
SCARNA1-201ENST00000517138 NCS1P62166 190 aa-1.29□□□□□ -2.62
SCARNA1-201ENST00000517138 NMSQ5H8A3 153 aa-1.29□□□□□ -2.62
SCARNA1-201ENST00000517138 Q6JHZ5 121 aa-1.29□□□□□ -2.62
SCARNA1-201ENST00000517138 ZNF720Q7Z2F6 126 aa-1.29□□□□□ -2.62
SCARNA1-201ENST00000517138 LSM10Q969L4 123 aaKnown RBP-1.29□□□□□ -2.62
SCARNA1-201ENST00000517138 CHMP6Q96FZ7 201 aa-1.29□□□□□ -2.62
SCARNA1-201ENST00000517138 NDUFA4L2Q9NRX3 87 aa-1.29□□□□□ -2.62
SCARNA1-201ENST00000517138 MCRIP1C9JLW8 97 aa-1.3□□□□□ -2.62
SCARNA1-201ENST00000517138 H3BQV1 296 aa-1.3□□□□□ -2.62
SCARNA1-201ENST00000517138 SNAPC5O75971 98 aa-1.3□□□□□ -2.62
SCARNA1-201ENST00000517138 TPT1P13693 172 aaKnown RBP-1.3□□□□□ -2.62
SCARNA1-201ENST00000517138 BASP1P80723 227 aaKnown RBP-1.3□□□□□ -2.62
SCARNA1-201ENST00000517138 EMX2Q04743 252 aa-1.3□□□□□ -2.62
SCARNA1-201ENST00000517138 PIGYQ3MUY2 71 aa-1.3□□□□□ -2.62
SCARNA1-201ENST00000517138 KCNRGQ8N5I3 272 aa-1.3□□□□□ -2.62
SCARNA1-201ENST00000517138 OR5H6Q8NGV6 325 aa-1.3□□□□□ -2.62
SCARNA1-201ENST00000517138 SPTSSAQ969W0 71 aa-1.3□□□□□ -2.62
SCARNA1-201ENST00000517138 BORCS8Q96FH0 119 aa-1.3□□□□□ -2.62
SCARNA1-201ENST00000517138 FXYD6Q9H0Q3 95 aa-1.3□□□□□ -2.62
SCARNA1-201ENST00000517138 RERGLQ9H628 205 aa-1.3□□□□□ -2.62
SCARNA1-201ENST00000517138 A0A1B0GWA3 101 aa-1.31□□□□□ -2.62
SCARNA1-201ENST00000517138 ZNF815PA8K554 130 aa-1.31□□□□□ -2.62
SCARNA1-201ENST00000517138 C9JAW5 83 aa-1.31□□□□□ -2.62
SCARNA1-201ENST00000517138 F6UZH7 168 aa-1.31□□□□□ -2.62
SCARNA1-201ENST00000517138 APOC4-APOC2K7ER74 178 aa-1.31□□□□□ -2.62
SCARNA1-201ENST00000517138 CCKP06307 115 aa-1.31□□□□□ -2.62
SCARNA1-201ENST00000517138 ACYP1P07311 99 aa-1.31□□□□□ -2.62
SCARNA1-201ENST00000517138 IGLC6P0CF74 106 aa-1.31□□□□□ -2.62
SCARNA1-201ENST00000517138 FABP2P12104 132 aa-1.31□□□□□ -2.62
SCARNA1-201ENST00000517138 RPL7P18124 248 aaKnown RBP-1.31□□□□□ -2.62
SCARNA1-201ENST00000517138 COMMD6Q7Z4G1 85 aa-1.31□□□□□ -2.62
SCARNA1-201ENST00000517138 SNRNP25Q9BV90 132 aaKnown RBP-1.31□□□□□ -2.62
SCARNA1-201ENST00000517138 ATG5Q9H1Y0 275 aa-1.31□□□□□ -2.62
SCARNA1-201ENST00000517138 TRAV30A0A087WSZ9 112 aa-1.32□□□□□ -2.62
SCARNA1-201ENST00000517138 H3BVH4 76 aa-1.32□□□□□ -2.62
SCARNA1-201ENST00000517138 TSPAN19P0C672 248 aa-1.32□□□□□ -2.62
SCARNA1-201ENST00000517138 S100PP25815 95 aa-1.32□□□□□ -2.62
SCARNA1-201ENST00000517138 SDC4P31431 198 aa-1.32□□□□□ -2.62
SCARNA1-201ENST00000517138 RPS28P62857 69 aaKnown RBP-1.32□□□□□ -2.62
SCARNA1-201ENST00000517138 HMGN3Q15651 99 aa-1.32□□□□□ -2.62
SCARNA1-201ENST00000517138 SNX29P2Q8IUI4 249 aa-1.32□□□□□ -2.62
SCARNA1-201ENST00000517138 PRELID3AQ96N28 172 aa-1.32□□□□□ -2.62
SCARNA1-201ENST00000517138 FAM107BQ9H098 131 aa-1.32□□□□□ -2.62
SCARNA1-201ENST00000517138 COPZ2Q9P299 210 aa-1.32□□□□□ -2.62
SCARNA1-201ENST00000517138 H3BQ15 152 aa-1.33□□□□□ -2.62
SCARNA1-201ENST00000517138 EDF1O60869 148 aaKnown RBP-1.33□□□□□ -2.62
SCARNA1-201ENST00000517138 COPZ1P61923 177 aa-1.33□□□□□ -2.62
SCARNA1-201ENST00000517138 NCBP2-AS2Q69YL0 99 aa-1.33□□□□□ -2.62
SCARNA1-201ENST00000517138 TRAV21A0A0B4J279 112 aa-1.34□□□□□ -2.62
SCARNA1-201ENST00000517138 PPP1R17O96001 155 aa-1.34□□□□□ -2.62
SCARNA1-201ENST00000517138 TMEM78Q5T7P6 136 aa-1.34□□□□□ -2.62
SCARNA1-201ENST00000517138 DCUN1D2Q6PH85 259 aa-1.34□□□□□ -2.62
SCARNA1-201ENST00000517138 CROCCP2Q86T23 111 aa-1.34□□□□□ -2.62
SCARNA1-201ENST00000517138 NXT2Q9NPJ8 142 aaKnown RBP-1.34□□□□□ -2.62
SCARNA1-201ENST00000517138 TRAV13-2A0A0B4J235 113 aa-1.35□□□□□ -2.63
SCARNA1-201ENST00000517138 C7orf77A4D0Y5 90 aa-1.35□□□□□ -2.63
SCARNA1-201ENST00000517138 E5RI56 91 aa-1.35□□□□□ -2.63
SCARNA1-201ENST00000517138 IGLC2P0DOY2 106 aa-1.35□□□□□ -2.63
SCARNA1-201ENST00000517138 SNRPGP62308 76 aaKnown RBP-1.35□□□□□ -2.63
SCARNA1-201ENST00000517138 DPY30Q9C005 99 aa-1.35□□□□□ -2.63
SCARNA1-201ENST00000517138 TRBV27A0A0K0K1C4 114 aa-1.36□□□□□ -2.63
SCARNA1-201ENST00000517138 TCRBV3S1A0A5B6 114 aa-1.36□□□□□ -2.63
SCARNA1-201ENST00000517138 ARMS2P0C7Q2 107 aa-1.36□□□□□ -2.63
SCARNA1-201ENST00000517138 PYYP10082 97 aa-1.36□□□□□ -2.63
SCARNA1-201ENST00000517138 ELOF1P60002 83 aaKnown RBP-1.36□□□□□ -2.63
SCARNA1-201ENST00000517138 S100A12P80511 92 aa-1.36□□□□□ -2.63
SCARNA1-201ENST00000517138 STX19Q8N4C7 294 aa-1.36□□□□□ -2.63
SCARNA1-201ENST00000517138 TMEM141Q96I45 108 aa-1.36□□□□□ -2.63
SCARNA1-201ENST00000517138 CYP4F30PQ9H0H9 118 aa-1.36□□□□□ -2.63
SCARNA1-201ENST00000517138 ERG28Q9UKR5 140 aa-1.36□□□□□ -2.63
SCARNA1-201ENST00000517138 V9GYS6 101 aa-1.36□□□□□ -2.63
SCARNA1-201ENST00000517138 A0A087WXM4 84 aa-1.37□□□□□ -2.63
SCARNA1-201ENST00000517138 TRDV1A0A1B0GX56 115 aa-1.37□□□□□ -2.63
SCARNA1-201ENST00000517138 SNRPGP15A8MWD9 76 aa-1.37□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms