RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 UBR1Q8IWV7 1749 aa-4.86□□□□□ -3.19
RNU6-542P-201ENST00000516405 KIAA0586Q9BVV6 1533 aa-4.87□□□□□ -3.19
RNU6-542P-201ENST00000516405 DBIP07108 87 aaKnown RBP-4.87□□□□□ -3.19
RNU6-542P-201ENST00000516405 TSPAN19P0C672 248 aa-4.87□□□□□ -3.19
RNU6-542P-201ENST00000516405 RERGLQ9H628 205 aa-4.87□□□□□ -3.19
RNU6-542P-201ENST00000516405 PPLO60437 1756 aa-4.87□□□□□ -3.19
RNU6-542P-201ENST00000516405 TFAMQ00059 246 aaKnown RBP-4.88□□□□□ -3.19
RNU6-542P-201ENST00000516405 ATPIF1Q9UII2 106 aa-4.88□□□□□ -3.19
RNU6-542P-201ENST00000516405 ASXL1Q8IXJ9 1541 aa-4.88□□□□□ -3.19
RNU6-542P-201ENST00000516405 MORN2Q502X0 79 aa-4.89□□□□□ -3.19
RNU6-542P-201ENST00000516405 GAFA1Q96PS6 74 aa-4.89□□□□□ -3.19
RNU6-542P-201ENST00000516405 SCAPERQ9BY12 1400 aa-4.9□□□□□ -3.19
RNU6-542P-201ENST00000516405 MED14O60244 1454 aa-4.91□□□□□ -3.2
RNU6-542P-201ENST00000516405 H3BUA1 57 aa-4.91□□□□□ -3.2
RNU6-542P-201ENST00000516405 ANP32BQ92688 251 aaKnown RBP-4.91□□□□□ -3.2
RNU6-542P-201ENST00000516405 PDCD10Q9BUL8 212 aa-4.91□□□□□ -3.2
RNU6-542P-201ENST00000516405 CENPFP49454 3210 aa-4.91□□□□□ -3.2
RNU6-542P-201ENST00000516405 ANKRD36BQ8N2N9 1353 aa-4.91□□□□□ -3.2
RNU6-542P-201ENST00000516405 ATP10BO94823 1461 aa-4.92□□□□□ -3.2
RNU6-542P-201ENST00000516405 TMEM262E9PQX1 116 aa-4.92□□□□□ -3.2
RNU6-542P-201ENST00000516405 RGS21Q2M5E4 152 aa-4.92□□□□□ -3.2
RNU6-542P-201ENST00000516405 BVES-AS1Q5T3Y7 98 aa-4.92□□□□□ -3.2
RNU6-542P-201ENST00000516405 C8orf59Q8N0T1 100 aaPredicted RBP-4.93□□□□□ -3.2
RNU6-542P-201ENST00000516405 MIF4GDA9UHW6 222 aaKnown RBP-4.94□□□□□ -3.2
RNU6-542P-201ENST00000516405 SPHKAPQ2M3C7 1700 aa-4.94□□□□□ -3.2
RNU6-542P-201ENST00000516405 TMEM218A2RU14 115 aa-4.95□□□□□ -3.2
RNU6-542P-201ENST00000516405 K7ERU9 68 aa-4.95□□□□□ -3.2
RNU6-542P-201ENST00000516405 SMCO1Q147U7 214 aa-4.96□□□□□ -3.2
RNU6-542P-201ENST00000516405 PLIN4Q96Q06 1357 aa-4.96□□□□□ -3.2
RNU6-542P-201ENST00000516405 TJP1Q07157 1748 aa-4.97□□□□□ -3.2
RNU6-542P-201ENST00000516405 J3QR89 54 aa-4.97□□□□□ -3.21
RNU6-542P-201ENST00000516405 TRIQKQ629K1 86 aa-4.97□□□□□ -3.21
RNU6-542P-201ENST00000516405 CGREF1Q99674 301 aa-4.97□□□□□ -3.21
RNU6-542P-201ENST00000516405 SMIM3Q9BZL3 60 aa-4.97□□□□□ -3.21
RNU6-542P-201ENST00000516405 TRBV25-1A0A075B6N4 114 aa-4.98□□□□□ -3.21
RNU6-542P-201ENST00000516405 IQCF6A8MYZ5 107 aa-4.98□□□□□ -3.21
RNU6-542P-201ENST00000516405 CATR1Q13166 79 aa-4.98□□□□□ -3.21
RNU6-542P-201ENST00000516405 CCDC153Q494R4 210 aa-4.98□□□□□ -3.21
RNU6-542P-201ENST00000516405 C1orf54Q8WWF1 131 aa-4.98□□□□□ -3.21
RNU6-542P-201ENST00000516405 COPS9Q8WXC6 57 aa-4.98□□□□□ -3.21
RNU6-542P-201ENST00000516405 PCBD2Q9H0N5 130 aa-4.98□□□□□ -3.21
RNU6-542P-201ENST00000516405 FHAD1B1AJZ9 1412 aa-4.98□□□□□ -3.21
RNU6-542P-201ENST00000516405 THOC2Q8NI27 1593 aaKnown RBP-4.99□□□□□ -3.21
RNU6-542P-201ENST00000516405 FOCADQ5VW36 1801 aa-4.99□□□□□ -3.21
RNU6-542P-201ENST00000516405 NAP1L6A6NFF2 107 aa-4.99□□□□□ -3.21
RNU6-542P-201ENST00000516405 CRYM-AS1A6NIL9 109 aa-4.99□□□□□ -3.21
RNU6-542P-201ENST00000516405 NCBP2-AS2Q69YL0 99 aa-4.99□□□□□ -3.21
RNU6-542P-201ENST00000516405 ZNF436-AS1Q8NC38 126 aaPredicted RBP-4.99□□□□□ -3.21
RNU6-542P-201ENST00000516405 GID8Q9NWU2 228 aa-4.99□□□□□ -3.21
RNU6-542P-201ENST00000516405 CACFD1Q9UGQ2 172 aa-4.99□□□□□ -3.21
RNU6-542P-201ENST00000516405 MAP3K4Q9Y6R4 1608 aa-4.99□□□□□ -3.21
RNU6-542P-201ENST00000516405 CD163L1Q9NR16 1453 aa-5□□□□□ -3.21
RNU6-542P-201ENST00000516405 ABCC2Q92887 1545 aa-5□□□□□ -3.21
RNU6-542P-201ENST00000516405 S100GP29377 79 aa-5□□□□□ -3.21
RNU6-542P-201ENST00000516405 D6R8Y8 96 aa-5.01□□□□□ -3.21
RNU6-542P-201ENST00000516405 PMCHL1Q16048 86 aa-5.01□□□□□ -3.21
RNU6-542P-201ENST00000516405 CCDC58Q4VC31 144 aa-5.01□□□□□ -3.21
RNU6-542P-201ENST00000516405 MUSTN1Q8IVN3 82 aa-5.01□□□□□ -3.21
RNU6-542P-201ENST00000516405 CCDC167Q9P0B6 97 aa-5.01□□□□□ -3.21
RNU6-542P-201ENST00000516405 NCOA2Q15596 1464 aa-5.01□□□□□ -3.21
RNU6-542P-201ENST00000516405 ZFYVE16Q7Z3T8 1539 aa-5.02□□□□□ -3.21
RNU6-542P-201ENST00000516405 NRAPQ86VF7 1730 aa-5.02□□□□□ -3.21
RNU6-542P-201ENST00000516405 SFTA3P0C7M3 94 aa-5.02□□□□□ -3.21
RNU6-542P-201ENST00000516405 DPH3P1Q9H4G8 78 aa-5.02□□□□□ -3.21
RNU6-542P-201ENST00000516405 GSKIPQ9P0R6 139 aa-5.02□□□□□ -3.21
RNU6-542P-201ENST00000516405 RICTORQ6R327 1708 aa-5.03□□□□□ -3.21
RNU6-542P-201ENST00000516405 DIP2BQ9P265 1576 aa-5.03□□□□□ -3.21
RNU6-542P-201ENST00000516405 OOSP1A8MZH6 123 aa-5.03□□□□□ -3.21
RNU6-542P-201ENST00000516405 SKA2Q8WVK7 121 aaPredicted RBP-5.03□□□□□ -3.21
RNU6-542P-201ENST00000516405 GINS2Q9Y248 185 aa-5.03□□□□□ -3.21
RNU6-542P-201ENST00000516405 NRXN1Q9ULB1 1477 aa-5.04□□□□□ -3.22
RNU6-542P-201ENST00000516405 KIF14Q15058 1648 aa-5.05□□□□□ -3.22
RNU6-542P-201ENST00000516405 TRAV21A0A0B4J279 112 aa-5.05□□□□□ -3.22
RNU6-542P-201ENST00000516405 M0R2Z0 102 aa-5.05□□□□□ -3.22
RNU6-542P-201ENST00000516405 COPZ1P61923 177 aa-5.05□□□□□ -3.22
RNU6-542P-201ENST00000516405 ALKAL2Q6UX46 152 aa-5.05□□□□□ -3.22
RNU6-542P-201ENST00000516405 ARFGEF2Q9Y6D5 1785 aa-5.06□□□□□ -3.22
RNU6-542P-201ENST00000516405 ATP5EP56381 51 aaPredicted RBP-5.07□□□□□ -3.22
RNU6-542P-201ENST00000516405 ABCA3Q99758 1704 aa-5.08□□□□□ -3.22
RNU6-542P-201ENST00000516405 A0A1B0GUT8 65 aa-5.08□□□□□ -3.22
RNU6-542P-201ENST00000516405 NDUFC1O43677 76 aa-5.08□□□□□ -3.22
RNU6-542P-201ENST00000516405 APOC2P02655 101 aa-5.08□□□□□ -3.22
RNU6-542P-201ENST00000516405 RPS25P62851 125 aaKnown RBP-5.08□□□□□ -3.22
RNU6-542P-201ENST00000516405 MRPS10P82664 201 aaKnown RBP-5.08□□□□□ -3.22
RNU6-542P-201ENST00000516405 MINOS1Q5TGZ0 78 aa-5.08□□□□□ -3.22
RNU6-542P-201ENST00000516405 SPANXCQ9NY87 97 aa-5.08□□□□□ -3.22
RNU6-542P-201ENST00000516405 XIRP2A4UGR9 3374 aa-5.08□□□□□ -3.22
RNU6-542P-201ENST00000516405 CCNB3Q8WWL7 1395 aa-5.08□□□□□ -3.22
RNU6-542P-201ENST00000516405 RAPGEF2Q9Y4G8 1499 aa-5.08□□□□□ -3.22
RNU6-542P-201ENST00000516405 CDH23Q9H251 3354 aa-5.08□□□□□ -3.22
RNU6-542P-201ENST00000516405 M0QX08 132 aa-5.1□□□□□ -3.23
RNU6-542P-201ENST00000516405 PREX2Q70Z35 1606 aa-5.11□□□□□ -3.23
RNU6-542P-201ENST00000516405 NEXMIFQ5QGS0 1516 aa-5.11□□□□□ -3.23
RNU6-542P-201ENST00000516405 EEA1Q15075 1411 aa-5.11□□□□□ -3.23
RNU6-542P-201ENST00000516405 DR1Q01658 176 aa-5.11□□□□□ -3.23
RNU6-542P-201ENST00000516405 HMGN3Q15651 99 aa-5.11□□□□□ -3.23
RNU6-542P-201ENST00000516405 UQCRHP07919 91 aa-5.12□□□□□ -3.23
RNU6-542P-201ENST00000516405 HSPB11Q9Y547 144 aa-5.12□□□□□ -3.23
RNU6-542P-201ENST00000516405 FAM208AQ9UK61 1670 aaKnown RBP-5.12□□□□□ -3.23
RNU6-542P-201ENST00000516405 RNF17Q9BXT8 1623 aaKnown RBP-5.12□□□□□ -3.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms