RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 SERF2P84101 59 aa1.3□□□□□ -2.2
HERC4-215ENST00000515753 PCOTHQ58A44 107 aa1.3□□□□□ -2.2
HERC4-215ENST00000515753 CLLU1Q5K131 121 aa1.3□□□□□ -2.2
HERC4-215ENST00000515753 SPINK6Q6UWN8 80 aa1.3□□□□□ -2.2
HERC4-215ENST00000515753 ATP11AUNQ6ZP68 121 aa1.3□□□□□ -2.2
HERC4-215ENST00000515753 LINC00299Q6ZSB3 139 aa1.3□□□□□ -2.2
HERC4-215ENST00000515753 C5orf17Q8NAS9 161 aa1.3□□□□□ -2.2
HERC4-215ENST00000515753 TSKUQ8WUA8 353 aa1.3□□□□□ -2.2
HERC4-215ENST00000515753 FAM167A-AS1Q96KT0 104 aa1.3□□□□□ -2.2
HERC4-215ENST00000515753 NAA38Q9BRA0 125 aaKnown RBP1.3□□□□□ -2.2
HERC4-215ENST00000515753 TCEAL7Q9BRU2 100 aa1.3□□□□□ -2.2
HERC4-215ENST00000515753 ZFP30Q9Y2G7 519 aa1.3□□□□□ -2.2
HERC4-215ENST00000515753 DNAH17Q9UFH2 4485 aa1.3□□□□□ -2.2
HERC4-215ENST00000515753 DNAH5Q8TE73 4624 aa1.3□□□□□ -2.2
HERC4-215ENST00000515753 MUC4Q99102 2169 aa1.3□□□□□ -2.2
HERC4-215ENST00000515753 DNAH6Q9C0G6 4158 aa1.29□□□□□ -2.2
HERC4-215ENST00000515753 ABCA13Q86UQ4 5058 aa1.29□□□□□ -2.2
HERC4-215ENST00000515753 TRBV25-1A0A075B6N4 114 aa1.29□□□□□ -2.2
HERC4-215ENST00000515753 LOC107984156A0A0G2JMH3 177 aa1.29□□□□□ -2.2
HERC4-215ENST00000515753 A0A1B0GV90 55 aa1.29□□□□□ -2.2
HERC4-215ENST00000515753 A6NN06 94 aa1.29□□□□□ -2.2
HERC4-215ENST00000515753 H3BRM9 83 aa1.29□□□□□ -2.2
HERC4-215ENST00000515753 INE1O15225 51 aa1.29□□□□□ -2.2
HERC4-215ENST00000515753 ANGP03950 147 aaKnown RBP1.29□□□□□ -2.2
HERC4-215ENST00000515753 HAMPP81172 84 aa1.29□□□□□ -2.2
HERC4-215ENST00000515753 ARL17AQ8IVW1 177 aa1.29□□□□□ -2.2
HERC4-215ENST00000515753 ZNF625Q96I27 306 aaPredicted RBP1.29□□□□□ -2.2
HERC4-215ENST00000515753 LINC01600Q96MT4 127 aa1.29□□□□□ -2.2
HERC4-215ENST00000515753 C2orf88Q9BSF0 95 aa1.29□□□□□ -2.2
HERC4-215ENST00000515753 V9GYH0 126 aa1.29□□□□□ -2.2
HERC4-215ENST00000515753 LOC110117498A0A087WWA1 95 aa1.28□□□□□ -2.2
HERC4-215ENST00000515753 TRBV6-1A0A0K0K1D8 114 aa1.28□□□□□ -2.2
HERC4-215ENST00000515753 CCL25O15444 150 aa1.28□□□□□ -2.2
HERC4-215ENST00000515753 ARMS2P0C7Q2 107 aa1.28□□□□□ -2.2
HERC4-215ENST00000515753 IL7P13232 177 aa1.28□□□□□ -2.2
HERC4-215ENST00000515753 KRTAP10-4P60372 401 aaPredicted RBP1.28□□□□□ -2.2
HERC4-215ENST00000515753 UBE2D3P61077 147 aa1.28□□□□□ -2.2
HERC4-215ENST00000515753 UBE2G1P62253 170 aa1.28□□□□□ -2.2
HERC4-215ENST00000515753 UBE2D2P62837 147 aa1.28□□□□□ -2.2
HERC4-215ENST00000515753 WFDC2Q14508 124 aa1.28□□□□□ -2.2
HERC4-215ENST00000515753 IQCJQ1A5X6 159 aa1.28□□□□□ -2.2
HERC4-215ENST00000515753 FAM74A4Q5TZK3 123 aa1.28□□□□□ -2.2
HERC4-215ENST00000515753 SPANXN1Q5VSR9 72 aa1.28□□□□□ -2.2
HERC4-215ENST00000515753 LINC01545Q5VT33 79 aa1.28□□□□□ -2.2
HERC4-215ENST00000515753 UNQ6190/PRO20217Q6UXQ8 127 aa1.28□□□□□ -2.2
HERC4-215ENST00000515753 S100ZQ8WXG8 99 aa1.28□□□□□ -2.2
HERC4-215ENST00000515753 PSMG3Q9BT73 122 aaPredicted RBP1.28□□□□□ -2.2
HERC4-215ENST00000515753 CDC42SE1Q9NRR8 79 aa1.28□□□□□ -2.2
HERC4-215ENST00000515753 PLAC8Q9NZF1 115 aa1.28□□□□□ -2.2
HERC4-215ENST00000515753 APOBP04114 4563 aaKnown RBP1.27□□□□□ -2.21
HERC4-215ENST00000515753 FRAS1Q86XX4 4008 aa1.27□□□□□ -2.21
HERC4-215ENST00000515753 F2Z2F3 143 aa1.27□□□□□ -2.21
HERC4-215ENST00000515753 MPC2O95563 127 aa1.27□□□□□ -2.21
HERC4-215ENST00000515753 MT1HL1P0DM35 61 aa1.27□□□□□ -2.21
HERC4-215ENST00000515753 ZNF25P17030 456 aaPredicted RBP1.27□□□□□ -2.21
HERC4-215ENST00000515753 ENHOQ6UWT2 76 aa1.27□□□□□ -2.21
HERC4-215ENST00000515753 PPP1R1CQ8WVI7 109 aa1.27□□□□□ -2.21
HERC4-215ENST00000515753 AQP10Q96PS8 301 aa1.27□□□□□ -2.21
HERC4-215ENST00000515753 ARL2-SNX15V9GYD0 113 aa1.27□□□□□ -2.21
HERC4-215ENST00000515753 CTXND1A0A1B0GTU2 59 aa1.26□□□□□ -2.21
HERC4-215ENST00000515753 LINC00587B1AMM8 73 aa1.26□□□□□ -2.21
HERC4-215ENST00000515753 UMAD1C9J7I0 102 aa1.26□□□□□ -2.21
HERC4-215ENST00000515753 H3BVH4 76 aa1.26□□□□□ -2.21
HERC4-215ENST00000515753 ARL14EPLP0DKL9 152 aa1.26□□□□□ -2.21
HERC4-215ENST00000515753 PRB4P10163 310 aaPredicted RBP1.26□□□□□ -2.21
HERC4-215ENST00000515753 ADCYAP1P18509 176 aa1.26□□□□□ -2.21
HERC4-215ENST00000515753 GCHFRP30047 84 aa1.26□□□□□ -2.21
HERC4-215ENST00000515753 COX6A2Q02221 97 aa1.26□□□□□ -2.21
HERC4-215ENST00000515753 ZNF56Q15929 161 aa1.26□□□□□ -2.21
HERC4-215ENST00000515753 BAGE2Q86Y30 109 aa1.26□□□□□ -2.21
HERC4-215ENST00000515753 KCNRGQ8N5I3 272 aa1.26□□□□□ -2.21
HERC4-215ENST00000515753 PKD1P98161 4303 aa1.26□□□□□ -2.21
HERC4-215ENST00000515753 HERC1Q15751 4861 aa1.26□□□□□ -2.21
HERC4-215ENST00000515753 PKHD1P08F94 4074 aa1.26□□□□□ -2.21
HERC4-215ENST00000515753 FAT1Q14517 4588 aa1.25□□□□□ -2.21
HERC4-215ENST00000515753 GVQW2A0A096LPI5 108 aaPredicted RBP1.25□□□□□ -2.21
HERC4-215ENST00000515753 IGKV3D-7A0A0C4DH55 119 aa1.25□□□□□ -2.21
HERC4-215ENST00000515753 IGKV3OR2-268A0A0C4DH90 116 aa1.25□□□□□ -2.21
HERC4-215ENST00000515753 M0QY20 66 aa1.25□□□□□ -2.21
HERC4-215ENST00000515753 PPP1R17O96001 155 aa1.25□□□□□ -2.21
HERC4-215ENST00000515753 UBE2D1P51668 147 aa1.25□□□□□ -2.21
HERC4-215ENST00000515753 KRTAP12-1P59990 96 aa1.25□□□□□ -2.21
HERC4-215ENST00000515753 Q86TA4 180 aa1.25□□□□□ -2.21
HERC4-215ENST00000515753 PPDPFLQ8WWR9 84 aa1.25□□□□□ -2.21
HERC4-215ENST00000515753 COPS9Q8WXC6 57 aa1.25□□□□□ -2.21
HERC4-215ENST00000515753 LINC00526Q96FQ7 95 aa1.25□□□□□ -2.21
HERC4-215ENST00000515753 DMBT1Q9UGM3 2413 aaPredicted RBP1.24□□□□□ -2.21
HERC4-215ENST00000515753 JMJD7-PLA2G4BH0Y9G9 81 aa1.24□□□□□ -2.21
HERC4-215ENST00000515753 I3L3M4 83 aa1.24□□□□□ -2.21
HERC4-215ENST00000515753 MGPP08493 103 aa1.24□□□□□ -2.21
HERC4-215ENST00000515753 S100A1P23297 94 aa1.24□□□□□ -2.21
HERC4-215ENST00000515753 CRIP1P50238 77 aa1.24□□□□□ -2.21
HERC4-215ENST00000515753 Q6ZUT4 128 aa1.24□□□□□ -2.21
HERC4-215ENST00000515753 C9orf62Q8N4C0 152 aa1.24□□□□□ -2.21
HERC4-215ENST00000515753 MYCBP2O75592 4640 aa1.23□□□□□ -2.21
HERC4-215ENST00000515753 HMCN2Q8NDA2 5059 aa1.23□□□□□ -2.21
HERC4-215ENST00000515753 LINC00959A0A1B0GUT2 108 aa1.23□□□□□ -2.21
HERC4-215ENST00000515753 CCDC179H3BU77 68 aa1.23□□□□□ -2.21
HERC4-215ENST00000515753 SIX6O95475 246 aa1.23□□□□□ -2.21
HERC4-215ENST00000515753 CLPSL2Q6UWE3 100 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms