RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 CCKP06307 115 aa12.47□□□□□ -0.41
TRIO-223ENST00000515710 ST20-AS1Q8NBB2 130 aa12.47□□□□□ -0.41
TRIO-223ENST00000515710 DSCR8Q96T75 97 aa12.46□□□□□ -0.42
TRIO-223ENST00000515710 HIGD2AQ9BW72 106 aa12.46□□□□□ -0.42
TRIO-223ENST00000515710 LOC110117498A0A087WWA1 95 aa12.45□□□□□ -0.42
TRIO-223ENST00000515710 PDE6GP18545 87 aa12.45□□□□□ -0.42
TRIO-223ENST00000515710 LINC00846Q9NV44 126 aa12.45□□□□□ -0.42
TRIO-223ENST00000515710 SACSQ9NZJ4 4579 aa12.44□□□□□ -0.42
TRIO-223ENST00000515710 DNAH11Q96DT5 4516 aa12.43□□□□□ -0.42
TRIO-223ENST00000515710 CYSTM1Q9H1C7 97 aa12.43□□□□□ -0.42
TRIO-223ENST00000515710 FAM30AQ9NZY2 134 aa12.43□□□□□ -0.42
TRIO-223ENST00000515710 KRTAP10-1P60331 282 aa12.42□□□□□ -0.42
TRIO-223ENST00000515710 Q6ZSA8 131 aa12.42□□□□□ -0.42
TRIO-223ENST00000515710 KRTAP13-1Q8IUC0 172 aa12.42□□□□□ -0.42
TRIO-223ENST00000515710 Q6ZQT0 140 aa12.41□□□□□ -0.42
TRIO-223ENST00000515710 TRBV7-4A0A0J9YYF1 115 aa12.41□□□□□ -0.42
TRIO-223ENST00000515710 PSORS1C2Q9UIG4 136 aa12.41□□□□□ -0.42
TRIO-223ENST00000515710 CIRBP-AS1Q8TBR5 109 aa12.39□□□□□ -0.43
TRIO-223ENST00000515710 FAT2Q9NYQ8 4349 aa12.39□□□□□ -0.43
TRIO-223ENST00000515710 IGKV3D-7A0A0C4DH55 119 aa12.37□□□□□ -0.43
TRIO-223ENST00000515710 DNAH5Q8TE73 4624 aa12.36□□□□□ -0.43
TRIO-223ENST00000515710 OXTP01178 125 aa12.35□□□□□ -0.43
TRIO-223ENST00000515710 C1orf137Q5JT78 98 aa12.35□□□□□ -0.43
TRIO-223ENST00000515710 SPRR1BP22528 89 aa12.35□□□□□ -0.43
TRIO-223ENST00000515710 Q5XG85 94 aa12.35□□□□□ -0.43
TRIO-223ENST00000515710 SCXQ7RTU7 201 aa12.35□□□□□ -0.43
TRIO-223ENST00000515710 SMIM29Q86T20 159 aa12.35□□□□□ -0.43
TRIO-223ENST00000515710 DNAH8Q96JB1 4490 aa12.33□□□□□ -0.44
TRIO-223ENST00000515710 PKD1P98161 4303 aa12.32□□□□□ -0.44
TRIO-223ENST00000515710 A0A087WVE0 104 aa12.31□□□□□ -0.44
TRIO-223ENST00000515710 F8WEM9 126 aa12.31□□□□□ -0.44
TRIO-223ENST00000515710 ZNF861PO60384 105 aa12.31□□□□□ -0.44
TRIO-223ENST00000515710 A0A1B0GVY2 172 aa12.29□□□□□ -0.44
TRIO-223ENST00000515710 IGLV7-43P04211 117 aa12.27□□□□□ -0.45
TRIO-223ENST00000515710 ZNF706Q9Y5V0 76 aaPredicted RBP12.27□□□□□ -0.45
TRIO-223ENST00000515710 IGLV8-61A0A075B6I0 122 aa12.25□□□□□ -0.45
TRIO-223ENST00000515710 SPRR4Q96PI1 79 aa12.24□□□□□ -0.45
TRIO-223ENST00000515710 SERP1Q9Y6X1 66 aa12.24□□□□□ -0.45
TRIO-223ENST00000515710 UBL5Q9BZL1 73 aa12.23□□□□□ -0.45
TRIO-223ENST00000515710 FAM236DA0A1B0GTK5 79 aa12.23□□□□□ -0.45
TRIO-223ENST00000515710 FAM236CP0DP71 79 aa12.23□□□□□ -0.45
TRIO-223ENST00000515710 C4orf26Q17RF5 130 aa12.23□□□□□ -0.45
TRIO-223ENST00000515710 A0A1B0GW54 56 aa12.22□□□□□ -0.45
TRIO-223ENST00000515710 TRAV7A0A075B6U4 112 aa12.21□□□□□ -0.45
TRIO-223ENST00000515710 HAMPP81172 84 aa12.21□□□□□ -0.45
TRIO-223ENST00000515710 LINC00483Q53H64 154 aa12.21□□□□□ -0.46
TRIO-223ENST00000515710 KLKP1Q107X0 134 aa12.19□□□□□ -0.46
TRIO-223ENST00000515710 A0A1W2PNM2 257 aa12.19□□□□□ -0.46
TRIO-223ENST00000515710 HRCT1Q6UXD1 115 aa12.19□□□□□ -0.46
TRIO-223ENST00000515710 Q8NBF4 154 aa12.19□□□□□ -0.46
TRIO-223ENST00000515710 IGFL1Q6UW32 110 aa12.17□□□□□ -0.46
TRIO-223ENST00000515710 H7BZZ5 65 aa12.17□□□□□ -0.46
TRIO-223ENST00000515710 RYR2Q92736 4967 aa12.16□□□□□ -0.46
TRIO-223ENST00000515710 Q6ZVQ6 151 aa12.15□□□□□ -0.46
TRIO-223ENST00000515710 C20orf197Q8N268 126 aa12.14□□□□□ -0.47
TRIO-223ENST00000515710 PRO0628Q9UI54 55 aa12.13□□□□□ -0.47
TRIO-223ENST00000515710 ATP5EP56381 51 aaPredicted RBP12.12□□□□□ -0.47
TRIO-223ENST00000515710 NDUFC1O43677 76 aa12.11□□□□□ -0.47
TRIO-223ENST00000515710 CXCL6P80162 114 aa12.1□□□□□ -0.47
TRIO-223ENST00000515710 RPL37AP61513 92 aaKnown RBP12.09□□□□□ -0.47
TRIO-223ENST00000515710 SMIM26A0A096LP01 95 aa12.09□□□□□ -0.47
TRIO-223ENST00000515710 NREPQ16612 68 aa12.09□□□□□ -0.47
TRIO-223ENST00000515710 A0A0G2JQZ4 141 aa12.07□□□□□ -0.48
TRIO-223ENST00000515710 IGLV9-49A0A0B4J1Y8 123 aa12.07□□□□□ -0.48
TRIO-223ENST00000515710 KMT2CQ8NEZ4 4911 aaKnown RBP12.06□□□□□ -0.48
TRIO-223ENST00000515710 LRP1BQ9NZR2 4599 aa12.05□□□□□ -0.48
TRIO-223ENST00000515710 ANAPC11Q9NYG5 84 aa12.04□□□□□ -0.48
TRIO-223ENST00000515710 DYNC1H1Q14204 4646 aaKnown RBP12.01□□□□□ -0.49
TRIO-223ENST00000515710 MOBPQ13875 183 aa11.99□□□□□ -0.49
TRIO-223ENST00000515710 A0A087WSZ3 146 aa11.98□□□□□ -0.49
TRIO-223ENST00000515710 SRRM2Q9UQ35 2752 aaKnown RBP11.98□□□□□ -0.49
TRIO-223ENST00000515710 BPY2O14599 106 aa11.96□□□□□ -0.49
TRIO-223ENST00000515710 FP248Q71RG6 208 aaPredicted RBP11.96□□□□□ -0.49
TRIO-223ENST00000515710 PKHD1P08F94 4074 aa11.96□□□□□ -0.49
TRIO-223ENST00000515710 SMR3BP02814 79 aaPredicted RBP11.96□□□□□ -0.5
TRIO-223ENST00000515710 FAM229BQ4G0N7 80 aa11.96□□□□□ -0.5
TRIO-223ENST00000515710 SPINK6Q6UWN8 80 aa11.94□□□□□ -0.5
TRIO-223ENST00000515710 SSBP3-AS1Q7Z2R9 100 aa11.94□□□□□ -0.5
TRIO-223ENST00000515710 KRTAP1-4P0C5Y4 121 aa11.9□□□□□ -0.51
TRIO-223ENST00000515710 SNURFQ9Y675 71 aa11.87□□□□□ -0.51
TRIO-223ENST00000515710 APOBP04114 4563 aaKnown RBP11.87□□□□□ -0.51
TRIO-223ENST00000515710 A0A087X002 238 aa11.86□□□□□ -0.51
TRIO-223ENST00000515710 CD164Q04900 197 aa11.86□□□□□ -0.51
TRIO-223ENST00000515710 KRTAP10-4P60372 401 aaPredicted RBP11.84□□□□□ -0.51
TRIO-223ENST00000515710 KRTAP13-2Q52LG2 175 aa11.84□□□□□ -0.51
TRIO-223ENST00000515710 PLA2G1BP04054 148 aaKnown RBP11.84□□□□□ -0.51
TRIO-223ENST00000515710 TMEM254Q8TBM7 123 aa11.84□□□□□ -0.51
TRIO-223ENST00000515710 VPS13BQ7Z7G8 4022 aa11.84□□□□□ -0.51
TRIO-223ENST00000515710 LINC00472Q9H8W2 130 aa11.83□□□□□ -0.52
TRIO-223ENST00000515710 IGKV4-1P06312 121 aa11.82□□□□□ -0.52
TRIO-223ENST00000515710 DSCR10P59022 87 aa11.82□□□□□ -0.52
TRIO-223ENST00000515710 CDK2AP2O75956 126 aa11.81□□□□□ -0.52
TRIO-223ENST00000515710 RYR3Q15413 4870 aa11.81□□□□□ -0.52
TRIO-223ENST00000515710 Q8N9L7 120 aa11.8□□□□□ -0.52
TRIO-223ENST00000515710 A0A0U1RQV1 116 aa11.79□□□□□ -0.52
TRIO-223ENST00000515710 DEFB116Q30KQ4 102 aa11.78□□□□□ -0.52
TRIO-223ENST00000515710 FAM229AH3BQW9 127 aa11.78□□□□□ -0.52
TRIO-223ENST00000515710 OCR1Q9BZK8 76 aa11.77□□□□□ -0.53
TRIO-223ENST00000515710 TYMSOSQ8TAI1 123 aa11.74□□□□□ -0.53
TRIO-223ENST00000515710 K7EQZ3 153 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms