RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 KRTAP13-1Q8IUC0 172 aa5.62□□□□□ -1.51
CPNE4-213ENST00000515418 VPS13BQ7Z7G8 4022 aa5.62□□□□□ -1.51
CPNE4-213ENST00000515418 H0Y9J4 135 aa5.61□□□□□ -1.51
CPNE4-213ENST00000515418 JMJD7-PLA2G4BH0Y9G9 81 aa5.6□□□□□ -1.51
CPNE4-213ENST00000515418 RBM3P98179 157 aaKnown RBP5.6□□□□□ -1.51
CPNE4-213ENST00000515418 GAGE2AQ6NT46 116 aa5.6□□□□□ -1.51
CPNE4-213ENST00000515418 IGLV5-48A0A075B6I7 105 aa5.6□□□□□ -1.51
CPNE4-213ENST00000515418 APOBP04114 4563 aaKnown RBP5.59□□□□□ -1.51
CPNE4-213ENST00000515418 H3BQ85 93 aa5.59□□□□□ -1.51
CPNE4-213ENST00000515418 GHRHP01286 108 aa5.59□□□□□ -1.51
CPNE4-213ENST00000515418 LCE3BQ5TA77 95 aa5.59□□□□□ -1.51
CPNE4-213ENST00000515418 VPS25Q9BRG1 176 aa5.59□□□□□ -1.51
CPNE4-213ENST00000515418 SMIM29Q86T20 159 aa5.58□□□□□ -1.52
CPNE4-213ENST00000515418 CDIP1Q9H305 208 aa5.58□□□□□ -1.52
CPNE4-213ENST00000515418 FAT1Q14517 4588 aa5.57□□□□□ -1.52
CPNE4-213ENST00000515418 C21orf62-AS1Q17RA5 79 aa5.57□□□□□ -1.52
CPNE4-213ENST00000515418 DSCR8Q96T75 97 aa5.57□□□□□ -1.52
CPNE4-213ENST00000515418 A0A0G2JQZ4 141 aa5.56□□□□□ -1.52
CPNE4-213ENST00000515418 CCKP06307 115 aa5.56□□□□□ -1.52
CPNE4-213ENST00000515418 ZNF861PO60384 105 aa5.56□□□□□ -1.52
CPNE4-213ENST00000515418 IGLV7-43P04211 117 aa5.56□□□□□ -1.52
CPNE4-213ENST00000515418 XGP55808 180 aa5.56□□□□□ -1.52
CPNE4-213ENST00000515418 Q6ZQT0 140 aa5.56□□□□□ -1.52
CPNE4-213ENST00000515418 TRBV7-4A0A0J9YYF1 115 aa5.55□□□□□ -1.52
CPNE4-213ENST00000515418 ANAPC11Q9NYG5 84 aa5.55□□□□□ -1.52
CPNE4-213ENST00000515418 LOC110117498A0A087WWA1 95 aa5.55□□□□□ -1.52
CPNE4-213ENST00000515418 SMR3BP02814 79 aaPredicted RBP5.55□□□□□ -1.52
CPNE4-213ENST00000515418 LCE2AQ5TA79 106 aaPredicted RBP5.55□□□□□ -1.52
CPNE4-213ENST00000515418 FAM240AA0A1B0GVK7 77 aa5.53□□□□□ -1.52
CPNE4-213ENST00000515418 SPRR4Q96PI1 79 aa5.53□□□□□ -1.52
CPNE4-213ENST00000515418 KRTAP9-9Q9BYP9 154 aa5.53□□□□□ -1.52
CPNE4-213ENST00000515418 KRTAP9-4Q9BYQ2 154 aa5.53□□□□□ -1.52
CPNE4-213ENST00000515418 LINC00846Q9NV44 126 aa5.53□□□□□ -1.52
CPNE4-213ENST00000515418 ACYP1P07311 99 aa5.52□□□□□ -1.53
CPNE4-213ENST00000515418 SPRR1BP22528 89 aa5.52□□□□□ -1.53
CPNE4-213ENST00000515418 EPPK1P58107 5090 aaKnown RBP5.52□□□□□ -1.53
CPNE4-213ENST00000515418 F8WEM9 126 aa5.51□□□□□ -1.53
CPNE4-213ENST00000515418 MT-ATP8P03928 68 aa5.51□□□□□ -1.53
CPNE4-213ENST00000515418 PDE6GP18545 87 aa5.51□□□□□ -1.53
CPNE4-213ENST00000515418 IGLV9-49A0A0B4J1Y8 123 aa5.5□□□□□ -1.53
CPNE4-213ENST00000515418 A0A1W2PNM2 257 aa5.5□□□□□ -1.53
CPNE4-213ENST00000515418 IGFL1Q6UW32 110 aa5.49□□□□□ -1.53
CPNE4-213ENST00000515418 SIGMAR1Q99720 223 aa5.49□□□□□ -1.53
CPNE4-213ENST00000515418 LINC00483Q53H64 154 aa5.49□□□□□ -1.53
CPNE4-213ENST00000515418 ZNF706Q9Y5V0 76 aaPredicted RBP5.48□□□□□ -1.53
CPNE4-213ENST00000515418 IGLV8-61A0A075B6I0 122 aa5.47□□□□□ -1.53
CPNE4-213ENST00000515418 RPL37AP61513 92 aaKnown RBP5.47□□□□□ -1.53
CPNE4-213ENST00000515418 KRTAP4-2Q9BYR5 136 aa5.47□□□□□ -1.53
CPNE4-213ENST00000515418 HSPG2P98160 4391 aa5.46□□□□□ -1.53
CPNE4-213ENST00000515418 KIAA1109Q2LD37 5005 aa5.46□□□□□ -1.53
CPNE4-213ENST00000515418 C9orf153Q5TBE3 101 aa5.46□□□□□ -1.54
CPNE4-213ENST00000515418 Q8NBF4 154 aa5.46□□□□□ -1.54
CPNE4-213ENST00000515418 RYR1P21817 5038 aa5.45□□□□□ -1.54
CPNE4-213ENST00000515418 IGKV3D-7A0A0C4DH55 119 aa5.45□□□□□ -1.54
CPNE4-213ENST00000515418 MOBPQ13875 183 aa5.45□□□□□ -1.54
CPNE4-213ENST00000515418 LINC00643Q86TS7 51 aa5.45□□□□□ -1.54
CPNE4-213ENST00000515418 Q6ZVQ6 151 aa5.44□□□□□ -1.54
CPNE4-213ENST00000515418 UBL5Q9BZL1 73 aa5.44□□□□□ -1.54
CPNE4-213ENST00000515418 HRCT1Q6UXD1 115 aa5.44□□□□□ -1.54
CPNE4-213ENST00000515418 A0A087X002 238 aa5.43□□□□□ -1.54
CPNE4-213ENST00000515418 CRYGAP11844 174 aa5.43□□□□□ -1.54
CPNE4-213ENST00000515418 Q6JHZ5 121 aa5.43□□□□□ -1.54
CPNE4-213ENST00000515418 KRTAP10-4P60372 401 aaPredicted RBP5.42□□□□□ -1.54
CPNE4-213ENST00000515418 KRTAP1-4P0C5Y4 121 aa5.42□□□□□ -1.54
CPNE4-213ENST00000515418 NREPQ16612 68 aa5.42□□□□□ -1.54
CPNE4-213ENST00000515418 A0A087WSZ3 146 aa5.41□□□□□ -1.54
CPNE4-213ENST00000515418 KRTAP13-2Q52LG2 175 aa5.41□□□□□ -1.54
CPNE4-213ENST00000515418 PLA2G1BP04054 148 aaKnown RBP5.4□□□□□ -1.54
CPNE4-213ENST00000515418 DEFB116Q30KQ4 102 aa5.4□□□□□ -1.55
CPNE4-213ENST00000515418 SPINK6Q6UWN8 80 aa5.4□□□□□ -1.55
CPNE4-213ENST00000515418 TRBV7-7A0A0K0K1E9 115 aa5.38□□□□□ -1.55
CPNE4-213ENST00000515418 A0A1B0GW54 56 aa5.38□□□□□ -1.55
CPNE4-213ENST00000515418 A0A087WVE0 104 aa5.37□□□□□ -1.55
CPNE4-213ENST00000515418 CDK2AP2O75956 126 aa5.37□□□□□ -1.55
CPNE4-213ENST00000515418 HIST1H4AP62805 103 aaKnown RBP5.37□□□□□ -1.55
CPNE4-213ENST00000515418 Q6Q795 121 aa5.37□□□□□ -1.55
CPNE4-213ENST00000515418 FAM229AH3BQW9 127 aa5.36□□□□□ -1.55
CPNE4-213ENST00000515418 Q8N9L7 120 aa5.36□□□□□ -1.55
CPNE4-213ENST00000515418 LRP1Q07954 4544 aaKnown RBP5.36□□□□□ -1.55
CPNE4-213ENST00000515418 FAM229BQ4G0N7 80 aa5.36□□□□□ -1.55
CPNE4-213ENST00000515418 BPY2O14599 106 aa5.35□□□□□ -1.55
CPNE4-213ENST00000515418 SSBP3-AS1Q7Z2R9 100 aa5.35□□□□□ -1.55
CPNE4-213ENST00000515418 PRR26Q8N8Z3 221 aa5.35□□□□□ -1.55
CPNE4-213ENST00000515418 FLG2Q5D862 2391 aaPredicted RBP5.34□□□□□ -1.55
CPNE4-213ENST00000515418 CXCL6P80162 114 aa5.34□□□□□ -1.55
CPNE4-213ENST00000515418 Q5VSD8 79 aa5.34□□□□□ -1.55
CPNE4-213ENST00000515418 IMUPQ9GZP8 106 aa5.34□□□□□ -1.55
CPNE4-213ENST00000515418 PKHD1L1Q86WI1 4243 aa5.34□□□□□ -1.56
CPNE4-213ENST00000515418 ATP5EP2Q5VTU8 51 aa5.33□□□□□ -1.56
CPNE4-213ENST00000515418 TYMSOSQ8TAI1 123 aa5.33□□□□□ -1.56
CPNE4-213ENST00000515418 DSCR10P59022 87 aa5.32□□□□□ -1.56
CPNE4-213ENST00000515418 LINC00472Q9H8W2 130 aa5.32□□□□□ -1.56
CPNE4-213ENST00000515418 FAM236AA0A1B0GUQ0 79 aa5.31□□□□□ -1.56
CPNE4-213ENST00000515418 FAM236BA0A1B0GV22 79 aa5.31□□□□□ -1.56
CPNE4-213ENST00000515418 IGKV4-1P06312 121 aa5.3□□□□□ -1.56
CPNE4-213ENST00000515418 SCGB1A1P11684 91 aa5.3□□□□□ -1.56
CPNE4-213ENST00000515418 Q96NJ1 140 aa5.3□□□□□ -1.56
CPNE4-213ENST00000515418 K7EQZ3 153 aa5.29□□□□□ -1.56
CPNE4-213ENST00000515418 MYCBP2O75592 4640 aa5.29□□□□□ -1.56
CPNE4-213ENST00000515418 PCP4P48539 62 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms