RNA–Protein interactions for RNA: ENST00000515351.1

PCDH1-208, Transcript of protocadherin 1, humanhuman

TSL 2

Gene PCDH1, Length 2,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-208ENST00000515351 DNAH7Q8WXX0 4024 aa9.36□□□□□ -0.91
PCDH1-208ENST00000515351 DYNC2H1Q8NCM8 4307 aaKnown RBP9.36□□□□□ -0.91
PCDH1-208ENST00000515351 H0Y9J4 135 aa9.36□□□□□ -0.91
PCDH1-208ENST00000515351 SERP1Q9Y6X1 66 aa9.36□□□□□ -0.91
PCDH1-208ENST00000515351 EPM2AB3EWF7 344 aa9.35□□□□□ -0.91
PCDH1-208ENST00000515351 K7EQZ3 153 aa9.35□□□□□ -0.91
PCDH1-208ENST00000515351 A0A0U1RQV1 116 aa9.34□□□□□ -0.91
PCDH1-208ENST00000515351 NBDYA0A0U1RRE5 68 aa9.34□□□□□ -0.91
PCDH1-208ENST00000515351 UBE2AP49459 152 aa9.33□□□□□ -0.92
PCDH1-208ENST00000515351 MDFIQ99750 246 aa9.33□□□□□ -0.92
PCDH1-208ENST00000515351 PKIGQ9Y2B9 76 aa9.33□□□□□ -0.92
PCDH1-208ENST00000515351 NUPR2A6NF83 97 aa9.32□□□□□ -0.92
PCDH1-208ENST00000515351 FAM30AQ9NZY2 134 aa9.32□□□□□ -0.92
PCDH1-208ENST00000515351 SRRM2Q9UQ35 2752 aaKnown RBP9.32□□□□□ -0.92
PCDH1-208ENST00000515351 SPRR1BP22528 89 aa9.31□□□□□ -0.92
PCDH1-208ENST00000515351 Q6ZRN7 208 aaPredicted RBP9.31□□□□□ -0.92
PCDH1-208ENST00000515351 ATP5EP56381 51 aaPredicted RBP9.31□□□□□ -0.92
PCDH1-208ENST00000515351 A0A087WSZ3 146 aa9.3□□□□□ -0.92
PCDH1-208ENST00000515351 LINC00474Q9P2X8 69 aa9.3□□□□□ -0.92
PCDH1-208ENST00000515351 LCE6AA0A183 80 aa9.29□□□□□ -0.92
PCDH1-208ENST00000515351 Q5XG85 94 aa9.29□□□□□ -0.92
PCDH1-208ENST00000515351 HCG22E2RYF7 251 aa9.28□□□□□ -0.92
PCDH1-208ENST00000515351 PANO1I0J062 215 aa9.28□□□□□ -0.92
PCDH1-208ENST00000515351 DEFB116Q30KQ4 102 aa9.27□□□□□ -0.93
PCDH1-208ENST00000515351 PLECQ15149 4684 aaKnown RBP9.27□□□□□ -0.93
PCDH1-208ENST00000515351 KRTAP13-1Q8IUC0 172 aa9.24□□□□□ -0.93
PCDH1-208ENST00000515351 C4orf26Q17RF5 130 aa9.24□□□□□ -0.93
PCDH1-208ENST00000515351 SPACA4Q8TDM5 124 aa9.22□□□□□ -0.93
PCDH1-208ENST00000515351 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.21□□□□□ -0.93
PCDH1-208ENST00000515351 RPL37AP61513 92 aaKnown RBP9.2□□□□□ -0.94
PCDH1-208ENST00000515351 C5orf47Q569G3 176 aa9.2□□□□□ -0.94
PCDH1-208ENST00000515351 ZCCHC13Q8WW36 166 aaKnown RBP9.2□□□□□ -0.94
PCDH1-208ENST00000515351 WFDC13Q8IUB5 93 aa9.19□□□□□ -0.94
PCDH1-208ENST00000515351 SMIM26A0A096LP01 95 aa9.19□□□□□ -0.94
PCDH1-208ENST00000515351 LINC00472Q9H8W2 130 aa9.18□□□□□ -0.94
PCDH1-208ENST00000515351 STARD9Q9P2P6 4700 aa9.17□□□□□ -0.94
PCDH1-208ENST00000515351 A0A087WTM6 91 aa9.17□□□□□ -0.94
PCDH1-208ENST00000515351 HRCT1Q6UXD1 115 aa9.17□□□□□ -0.94
PCDH1-208ENST00000515351 KRTAP29-1A8MX34 341 aaPredicted RBP9.16□□□□□ -0.94
PCDH1-208ENST00000515351 FP248Q71RG6 208 aaPredicted RBP9.16□□□□□ -0.94
PCDH1-208ENST00000515351 PRR15Q8IV56 129 aa9.15□□□□□ -0.94
PCDH1-208ENST00000515351 VPS13DQ5THJ4 4388 aa9.14□□□□□ -0.95
PCDH1-208ENST00000515351 A8MWP4 228 aa9.14□□□□□ -0.95
PCDH1-208ENST00000515351 CASC2Q6XLA1 102 aa9.12□□□□□ -0.95
PCDH1-208ENST00000515351 RTL8CO15255 209 aa9.11□□□□□ -0.95
PCDH1-208ENST00000515351 PRKDCP78527 4128 aaKnown RBP9.1□□□□□ -0.95
PCDH1-208ENST00000515351 IGLV9-49A0A0B4J1Y8 123 aa9.1□□□□□ -0.95
PCDH1-208ENST00000515351 LINC00483Q53H64 154 aa9.1□□□□□ -0.95
PCDH1-208ENST00000515351 FAM229BQ4G0N7 80 aa9.1□□□□□ -0.95
PCDH1-208ENST00000515351 Q6ZR54 194 aa9.1□□□□□ -0.95
PCDH1-208ENST00000515351 MP68P56378 58 aa9.08□□□□□ -0.96
PCDH1-208ENST00000515351 HECTD4Q9Y4D8 3996 aa9.08□□□□□ -0.96
PCDH1-208ENST00000515351 IGLV5-52A0A0A0MRZ9 124 aa9.07□□□□□ -0.96
PCDH1-208ENST00000515351 PSORS1C2Q9UIG4 136 aa9.07□□□□□ -0.96
PCDH1-208ENST00000515351 PLAC8Q9NZF1 115 aa9.06□□□□□ -0.96
PCDH1-208ENST00000515351 ZNF706Q9Y5V0 76 aaPredicted RBP9.06□□□□□ -0.96
PCDH1-208ENST00000515351 NDUFB1O75438 58 aa9.06□□□□□ -0.96
PCDH1-208ENST00000515351 hDV103S1A0JD37 113 aa9.05□□□□□ -0.96
PCDH1-208ENST00000515351 Q96NJ1 140 aa9.05□□□□□ -0.96
PCDH1-208ENST00000515351 MEGF8Q7Z7M0 2845 aa9.04□□□□□ -0.96
PCDH1-208ENST00000515351 MMP24-AS1A0A0U1RRL7 71 aa9.04□□□□□ -0.96
PCDH1-208ENST00000515351 FBN3Q75N90 2809 aa9.04□□□□□ -0.96
PCDH1-208ENST00000515351 LINC00208Q96KT6 92 aa9.04□□□□□ -0.96
PCDH1-208ENST00000515351 WWC2-AS2Q96NR7 200 aa9.04□□□□□ -0.96
PCDH1-208ENST00000515351 TRAV22A0A0B4J277 110 aa9.03□□□□□ -0.96
PCDH1-208ENST00000515351 KMT2AQ03164 3969 aa9.03□□□□□ -0.96
PCDH1-208ENST00000515351 H0Y9P7 68 aa9.03□□□□□ -0.96
PCDH1-208ENST00000515351 C1orf64Q8NEQ6 169 aa9.03□□□□□ -0.96
PCDH1-208ENST00000515351 H3BPC8 53 aa9.02□□□□□ -0.97
PCDH1-208ENST00000515351 ZNF861PO60384 105 aa9.02□□□□□ -0.97
PCDH1-208ENST00000515351 CYP4F30PQ9H0H9 118 aa9.02□□□□□ -0.97
PCDH1-208ENST00000515351 MOBPQ13875 183 aa9.01□□□□□ -0.97
PCDH1-208ENST00000515351 C1orf134Q5TEV5 83 aa8.99□□□□□ -0.97
PCDH1-208ENST00000515351 MPLKIPQ8TAP9 179 aa8.99□□□□□ -0.97
PCDH1-208ENST00000515351 DNAH2Q9P225 4427 aa8.99□□□□□ -0.97
PCDH1-208ENST00000515351 DNAH17Q9UFH2 4485 aa8.99□□□□□ -0.97
PCDH1-208ENST00000515351 TGP01266 2768 aa8.99□□□□□ -0.97
PCDH1-208ENST00000515351 PRR4Q16378 134 aa8.98□□□□□ -0.97
PCDH1-208ENST00000515351 ANAPC11Q9NYG5 84 aa8.98□□□□□ -0.97
PCDH1-208ENST00000515351 ASB16-AS1Q495Z4 193 aa8.97□□□□□ -0.97
PCDH1-208ENST00000515351 LINC00336Q6ZUF6 198 aa8.97□□□□□ -0.97
PCDH1-208ENST00000515351 DNAH8Q96JB1 4490 aa8.95□□□□□ -0.98
PCDH1-208ENST00000515351 SPANXA2-OT1Q8N9U9 137 aa8.94□□□□□ -0.98
PCDH1-208ENST00000515351 C8orf17Q9NRJ1 99 aa8.94□□□□□ -0.98
PCDH1-208ENST00000515351 FRAS1Q86XX4 4008 aa8.94□□□□□ -0.98
PCDH1-208ENST00000515351 A0A1B0GVX0 72 aa8.92□□□□□ -0.98
PCDH1-208ENST00000515351 IGLV7-43P04211 117 aa8.92□□□□□ -0.98
PCDH1-208ENST00000515351 LY6G6CO95867 125 aa8.91□□□□□ -0.98
PCDH1-208ENST00000515351 TP53AIP1Q9HCN2 124 aa8.91□□□□□ -0.98
PCDH1-208ENST00000515351 IGHV6-1A0A0B4J1U7 121 aa8.9□□□□□ -0.98
PCDH1-208ENST00000515351 CDK2AP2O75956 126 aa8.89□□□□□ -0.99
PCDH1-208ENST00000515351 Q1T7F1 81 aa8.89□□□□□ -0.99
PCDH1-208ENST00000515351 PRO0628Q9UI54 55 aa8.88□□□□□ -0.99
PCDH1-208ENST00000515351 A0A087X002 238 aa8.83□□□□□ -1
PCDH1-208ENST00000515351 NOTCH2NLQ7Z3S9 236 aa8.83□□□□□ -1
PCDH1-208ENST00000515351 MRPL34Q9BQ48 92 aaKnown RBP8.83□□□□□ -1
PCDH1-208ENST00000515351 NDUFS5O43920 106 aa8.83□□□□□ -1
PCDH1-208ENST00000515351 KRTAP10-2P60368 255 aa8.83□□□□□ -1
PCDH1-208ENST00000515351 CIRBP-AS1Q8TBR5 109 aa8.83□□□□□ -1
PCDH1-208ENST00000515351 DNHD1Q96M86 4753 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms