RNA–Protein interactions for RNA: ENST00000515239.5

CSF1R-208, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 3

Gene CSF1R, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-208ENST00000515239 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.92□□□□□ -1.3
CSF1R-208ENST00000515239 IGKV2-29A2NJV5 120 aaPredicted RBP6.92□□□□□ -1.3
CSF1R-208ENST00000515239 CD164L2Q6UWJ8 174 aa6.92□□□□□ -1.3
CSF1R-208ENST00000515239 FAM168BA1KXE4 195 aa6.91□□□□□ -1.3
CSF1R-208ENST00000515239 TPRXLQ17RH7 258 aa6.91□□□□□ -1.3
CSF1R-208ENST00000515239 SMCR5Q8TEV8 140 aa6.91□□□□□ -1.3
CSF1R-208ENST00000515239 SND1-IT1Q9HBX3 110 aa6.91□□□□□ -1.3
CSF1R-208ENST00000515239 SERP1Q9Y6X1 66 aa6.91□□□□□ -1.3
CSF1R-208ENST00000515239 CCKP06307 115 aa6.9□□□□□ -1.3
CSF1R-208ENST00000515239 ZNF625Q96I27 306 aaPredicted RBP6.9□□□□□ -1.3
CSF1R-208ENST00000515239 CAMK2N2Q96S95 79 aa6.9□□□□□ -1.3
CSF1R-208ENST00000515239 RETNLBQ9BQ08 111 aa6.9□□□□□ -1.3
CSF1R-208ENST00000515239 SMIM1B2RUZ4 78 aa6.89□□□□□ -1.31
CSF1R-208ENST00000515239 LINC00242Q5T6M2 205 aa6.89□□□□□ -1.31
CSF1R-208ENST00000515239 KRTAP7-1Q8IUC3 87 aa6.89□□□□□ -1.31
CSF1R-208ENST00000515239 A0A087X002 238 aa6.88□□□□□ -1.31
CSF1R-208ENST00000515239 FAM236DA0A1B0GTK5 79 aa6.88□□□□□ -1.31
CSF1R-208ENST00000515239 FAM236CP0DP71 79 aa6.88□□□□□ -1.31
CSF1R-208ENST00000515239 SS18Q15532 418 aa6.88□□□□□ -1.31
CSF1R-208ENST00000515239 COX7B2Q8TF08 81 aa6.88□□□□□ -1.31
CSF1R-208ENST00000515239 LINC01561Q8N1V8 128 aa6.87□□□□□ -1.31
CSF1R-208ENST00000515239 IGLV7-46A0A075B6I9 117 aa6.86□□□□□ -1.31
CSF1R-208ENST00000515239 TRAV7A0A075B6U4 112 aa6.86□□□□□ -1.31
CSF1R-208ENST00000515239 ZNF861PO60384 105 aa6.86□□□□□ -1.31
CSF1R-208ENST00000515239 LINC00158P58513 81 aa6.86□□□□□ -1.31
CSF1R-208ENST00000515239 KRTAP4-1Q9BYQ7 146 aa6.86□□□□□ -1.31
CSF1R-208ENST00000515239 CDC42SE2Q9NRR3 84 aa6.86□□□□□ -1.31
CSF1R-208ENST00000515239 PRO0628Q9UI54 55 aa6.86□□□□□ -1.31
CSF1R-208ENST00000515239 SMIM26A0A096LP01 95 aa6.85□□□□□ -1.31
CSF1R-208ENST00000515239 TYMSOSQ8TAI1 123 aa6.85□□□□□ -1.31
CSF1R-208ENST00000515239 C14orf132Q9NPU4 83 aa6.85□□□□□ -1.31
CSF1R-208ENST00000515239 LAMTOR3Q9UHA4 124 aa6.85□□□□□ -1.31
CSF1R-208ENST00000515239 FAM104AQ969W3 186 aa6.84□□□□□ -1.31
CSF1R-208ENST00000515239 IGKV3D-7A0A0C4DH55 119 aa6.83□□□□□ -1.32
CSF1R-208ENST00000515239 KRTAP9-7A8MTY7 169 aa6.83□□□□□ -1.32
CSF1R-208ENST00000515239 UBE2BP63146 152 aa6.83□□□□□ -1.32
CSF1R-208ENST00000515239 COX17Q14061 63 aa6.83□□□□□ -1.32
CSF1R-208ENST00000515239 RNASE13Q5GAN3 156 aaKnown RBP6.83□□□□□ -1.32
CSF1R-208ENST00000515239 MIR7-3HGQ8N6C7 128 aa6.83□□□□□ -1.32
CSF1R-208ENST00000515239 SMIM11BQ8TCY0 68 aa6.83□□□□□ -1.32
CSF1R-208ENST00000515239 LINC00167Q96N53 147 aa6.83□□□□□ -1.32
CSF1R-208ENST00000515239 LINC00846Q9NV44 126 aa6.83□□□□□ -1.32
CSF1R-208ENST00000515239 TLX1NBP0CAT3 122 aa6.81□□□□□ -1.32
CSF1R-208ENST00000515239 CXCL6P80162 114 aa6.81□□□□□ -1.32
CSF1R-208ENST00000515239 SOSTDC1Q6X4U4 206 aa6.81□□□□□ -1.32
CSF1R-208ENST00000515239 SPAG11BQ08648 103 aa6.8□□□□□ -1.32
CSF1R-208ENST00000515239 ASB16-AS1Q495Z4 193 aa6.8□□□□□ -1.32
CSF1R-208ENST00000515239 C10orf25Q5T742 122 aa6.8□□□□□ -1.32
CSF1R-208ENST00000515239 LCE2CQ5TA81 110 aa6.8□□□□□ -1.32
CSF1R-208ENST00000515239 FAM218AQ96MZ4 157 aa6.8□□□□□ -1.32
CSF1R-208ENST00000515239 LOC110117498A0A087WWA1 95 aa6.79□□□□□ -1.32
CSF1R-208ENST00000515239 A0A0U1RRA0 63 aa6.79□□□□□ -1.32
CSF1R-208ENST00000515239 ERC2-IT1O76042 136 aa6.79□□□□□ -1.32
CSF1R-208ENST00000515239 PFN2P35080 140 aa6.79□□□□□ -1.32
CSF1R-208ENST00000515239 KLKP1Q107X0 134 aa6.79□□□□□ -1.32
CSF1R-208ENST00000515239 KRTAP13-2Q52LG2 175 aa6.79□□□□□ -1.32
CSF1R-208ENST00000515239 ANAPC11Q9NYG5 84 aa6.79□□□□□ -1.32
CSF1R-208ENST00000515239 RBM3P98179 157 aaKnown RBP6.78□□□□□ -1.32
CSF1R-208ENST00000515239 C6orf226Q5I0X4 101 aa6.78□□□□□ -1.32
CSF1R-208ENST00000515239 LINC00337Q8N6G1 96 aa6.78□□□□□ -1.32
CSF1R-208ENST00000515239 DSCR8Q96T75 97 aa6.78□□□□□ -1.32
CSF1R-208ENST00000515239 C6orf48Q9UBA6 75 aa6.78□□□□□ -1.32
CSF1R-208ENST00000515239 F8WDY8 70 aa6.77□□□□□ -1.33
CSF1R-208ENST00000515239 UNQ6190/PRO20217Q6UXQ8 127 aa6.77□□□□□ -1.33
CSF1R-208ENST00000515239 Q8IZM0 81 aa6.77□□□□□ -1.33
CSF1R-208ENST00000515239 TOMM7Q9P0U1 55 aa6.77□□□□□ -1.33
CSF1R-208ENST00000515239 C22orf24Q9Y442 160 aa6.77□□□□□ -1.33
CSF1R-208ENST00000515239 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.76□□□□□ -1.33
CSF1R-208ENST00000515239 C20orf197Q8N268 126 aa6.76□□□□□ -1.33
CSF1R-208ENST00000515239 LINC00304Q8N9R0 145 aa6.76□□□□□ -1.33
CSF1R-208ENST00000515239 IGKV2-28A0A075B6P5 120 aa6.75□□□□□ -1.33
CSF1R-208ENST00000515239 NCR3O14931 201 aa6.75□□□□□ -1.33
CSF1R-208ENST00000515239 IGKV2D-28P01615 120 aa6.75□□□□□ -1.33
CSF1R-208ENST00000515239 C9orf129Q5T035 196 aaKnown RBP6.75□□□□□ -1.33
CSF1R-208ENST00000515239 HRCT1Q6UXD1 115 aa6.75□□□□□ -1.33
CSF1R-208ENST00000515239 TRAV23DV6A0A075B6W5 121 aa6.74□□□□□ -1.33
CSF1R-208ENST00000515239 Q5XG85 94 aa6.74□□□□□ -1.33
CSF1R-208ENST00000515239 A0A087WVE0 104 aa6.72□□□□□ -1.33
CSF1R-208ENST00000515239 IGHV3OR16-9A0A0B4J2B5 98 aa6.72□□□□□ -1.33
CSF1R-208ENST00000515239 MT1HP80294 61 aa6.72□□□□□ -1.33
CSF1R-208ENST00000515239 C4orf26Q17RF5 130 aa6.72□□□□□ -1.33
CSF1R-208ENST00000515239 A0A1B0GW54 56 aa6.71□□□□□ -1.34
CSF1R-208ENST00000515239 LORP23490 312 aaPredicted RBP6.71□□□□□ -1.34
CSF1R-208ENST00000515239 KRTAP19-2Q3LHN2 52 aa6.71□□□□□ -1.34
CSF1R-208ENST00000515239 KRTAP13-3Q3SY46 172 aa6.71□□□□□ -1.34
CSF1R-208ENST00000515239 KIAA0087Q14695 138 aa6.7□□□□□ -1.34
CSF1R-208ENST00000515239 H7BZZ5 65 aa6.69□□□□□ -1.34
CSF1R-208ENST00000515239 SEC61BP60468 96 aaKnown RBP6.69□□□□□ -1.34
CSF1R-208ENST00000515239 FAM229BQ4G0N7 80 aa6.69□□□□□ -1.34
CSF1R-208ENST00000515239 Q6ZQT0 140 aa6.69□□□□□ -1.34
CSF1R-208ENST00000515239 TRBV7-6A0A0J9YX20 115 aa6.68□□□□□ -1.34
CSF1R-208ENST00000515239 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.68□□□□□ -1.34
CSF1R-208ENST00000515239 KRTAP10-6P60371 365 aaPredicted RBP6.67□□□□□ -1.34
CSF1R-208ENST00000515239 LINC00575Q6W349 94 aa6.67□□□□□ -1.34
CSF1R-208ENST00000515239 V9GYY9 64 aa6.67□□□□□ -1.34
CSF1R-208ENST00000515239 FP248Q71RG6 208 aaPredicted RBP6.66□□□□□ -1.34
CSF1R-208ENST00000515239 Q6ZVQ6 151 aa6.65□□□□□ -1.34
CSF1R-208ENST00000515239 FAM19A1Q7Z5A9 133 aa6.65□□□□□ -1.34
CSF1R-208ENST00000515239 KRTAP13-1Q8IUC0 172 aa6.65□□□□□ -1.34
CSF1R-208ENST00000515239 F8WEM9 126 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms