RNA–Protein interactions for RNA: ENST00000515160.5

CAST-243, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-243ENST00000515160 CLPSL2Q6UWE3 100 aa2.61□□□□□ -1.99
CAST-243ENST00000515160 IGKV3OR2-268A0A0C4DH90 116 aa2.6□□□□□ -1.99
CAST-243ENST00000515160 I3L3M4 83 aa2.6□□□□□ -1.99
CAST-243ENST00000515160 CCL25O15444 150 aa2.6□□□□□ -1.99
CAST-243ENST00000515160 ZNF25P17030 456 aaPredicted RBP2.6□□□□□ -1.99
CAST-243ENST00000515160 LCE1CQ5T751 118 aa2.6□□□□□ -1.99
CAST-243ENST00000515160 LCE1BQ5T7P3 118 aa2.6□□□□□ -1.99
CAST-243ENST00000515160 NEBP20929 6669 aa2.59□□□□□ -1.99
CAST-243ENST00000515160 IGHV1-58A0A0C4DH39 117 aa2.59□□□□□ -1.99
CAST-243ENST00000515160 TRBV6-5A0A0K0K1A5 114 aa2.59□□□□□ -1.99
CAST-243ENST00000515160 PPP1R17O96001 155 aa2.59□□□□□ -1.99
CAST-243ENST00000515160 FOXA3P55318 350 aaPredicted RBP2.59□□□□□ -1.99
CAST-243ENST00000515160 HBBP68871 147 aa2.59□□□□□ -1.99
CAST-243ENST00000515160 CNFNQ9BYD5 112 aa2.59□□□□□ -1.99
CAST-243ENST00000515160 ST20Q9HBF5 79 aa2.59□□□□□ -1.99
CAST-243ENST00000515160 NAT8BQ9UHF3 227 aa2.59□□□□□ -1.99
CAST-243ENST00000515160 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.58□□□□□ -2
CAST-243ENST00000515160 GVQW2A0A096LPI5 108 aaPredicted RBP2.58□□□□□ -2
CAST-243ENST00000515160 LINC00959A0A1B0GUT2 108 aa2.58□□□□□ -2
CAST-243ENST00000515160 IGKV2-29A2NJV5 120 aaPredicted RBP2.58□□□□□ -2
CAST-243ENST00000515160 K7ERJ3 54 aa2.58□□□□□ -2
CAST-243ENST00000515160 HIST1H2BKO60814 126 aa2.58□□□□□ -2
CAST-243ENST00000515160 HIST1H2BJP06899 126 aa2.58□□□□□ -2
CAST-243ENST00000515160 HRCT1Q6UXD1 115 aa2.58□□□□□ -2
CAST-243ENST00000515160 PHF5AQ7RTV0 110 aaKnown RBP2.58□□□□□ -2
CAST-243ENST00000515160 C14orf132Q9NPU4 83 aa2.58□□□□□ -2
CAST-243ENST00000515160 CDC42SE2Q9NRR3 84 aa2.58□□□□□ -2
CAST-243ENST00000515160 LOC107984640A0A0U1RRK4 108 aa2.57□□□□□ -2
CAST-243ENST00000515160 FCER1GP30273 86 aa2.57□□□□□ -2
CAST-243ENST00000515160 POLR2KP53803 58 aaKnown RBP2.57□□□□□ -2
CAST-243ENST00000515160 Q1T7F1 81 aa2.57□□□□□ -2
CAST-243ENST00000515160 TSKUQ8WUA8 353 aa2.57□□□□□ -2
CAST-243ENST00000515160 RPL39LQ96EH5 51 aaKnown RBP2.57□□□□□ -2
CAST-243ENST00000515160 RETNLBQ9BQ08 111 aa2.57□□□□□ -2
CAST-243ENST00000515160 TMEM191AQ9H0A3 160 aa2.57□□□□□ -2
CAST-243ENST00000515160 SPANXCQ9NY87 97 aa2.57□□□□□ -2
CAST-243ENST00000515160 TRBV27A0A0K0K1C4 114 aa2.56□□□□□ -2
CAST-243ENST00000515160 A0A1B0GUT8 65 aa2.56□□□□□ -2
CAST-243ENST00000515160 C7orf77A4D0Y5 90 aa2.56□□□□□ -2
CAST-243ENST00000515160 J3KT08 172 aa2.56□□□□□ -2
CAST-243ENST00000515160 NDUFA6P56556 154 aa2.56□□□□□ -2
CAST-243ENST00000515160 RPS28P62857 69 aaKnown RBP2.56□□□□□ -2
CAST-243ENST00000515160 ASB16-AS1Q495Z4 193 aa2.56□□□□□ -2
CAST-243ENST00000515160 TCTE3Q8IZS6 198 aa2.56□□□□□ -2
CAST-243ENST00000515160 ZNF727A8MUV8 499 aa2.55□□□□□ -2
CAST-243ENST00000515160 FABP2P12104 132 aa2.55□□□□□ -2
CAST-243ENST00000515160 TMEM242Q9NWH2 141 aa2.55□□□□□ -2
CAST-243ENST00000515160 HIGD1CA8MV81 97 aa2.54□□□□□ -2
CAST-243ENST00000515160 F8W036 122 aa2.54□□□□□ -2
CAST-243ENST00000515160 MT-ND6P03923 174 aa2.54□□□□□ -2
CAST-243ENST00000515160 S100A8P05109 93 aa2.54□□□□□ -2
CAST-243ENST00000515160 C9orf116Q5BN46 136 aaPredicted RBP2.54□□□□□ -2
CAST-243ENST00000515160 C1orf137Q5JT78 98 aa2.54□□□□□ -2
CAST-243ENST00000515160 DIRC1Q969H9 104 aa2.54□□□□□ -2
CAST-243ENST00000515160 LINC00526Q96FQ7 95 aa2.54□□□□□ -2
CAST-243ENST00000515160 SMIM7Q9BQ49 75 aa2.54□□□□□ -2
CAST-243ENST00000515160 C20orf78Q9BR46 151 aa2.54□□□□□ -2
CAST-243ENST00000515160 MRPL35Q9NZE8 188 aaKnown RBP2.54□□□□□ -2
CAST-243ENST00000515160 UBE2D4Q9Y2X8 147 aa2.54□□□□□ -2
CAST-243ENST00000515160 TRAV13-1A0A0B4J241 112 aa2.53□□□□□ -2
CAST-243ENST00000515160 A0A1B0GX51 115 aa2.53□□□□□ -2
CAST-243ENST00000515160 NDUFA1O15239 70 aa2.53□□□□□ -2
CAST-243ENST00000515160 CKS2P33552 79 aa2.53□□□□□ -2
CAST-243ENST00000515160 C5orf38Q86SI9 138 aa2.53□□□□□ -2
CAST-243ENST00000515160 COA5Q86WW8 74 aa2.53□□□□□ -2
CAST-243ENST00000515160 CHCHD1Q96BP2 118 aaKnown RBP2.53□□□□□ -2
CAST-243ENST00000515160 MUC12Q9UKN1 5478 aa2.53□□□□□ -2
CAST-243ENST00000515160 S100A12P80511 92 aa2.52□□□□□ -2.01
CAST-243ENST00000515160 MRPS36P82909 103 aaKnown RBP2.52□□□□□ -2.01
CAST-243ENST00000515160 SPAG11BQ08648 103 aa2.52□□□□□ -2.01
CAST-243ENST00000515160 PEA15Q15121 130 aa2.52□□□□□ -2.01
CAST-243ENST00000515160 ALKAL2Q6UX46 152 aa2.52□□□□□ -2.01
CAST-243ENST00000515160 PP632Q6XCG6 107 aa2.52□□□□□ -2.01
CAST-243ENST00000515160 FP248Q71RG6 208 aaPredicted RBP2.52□□□□□ -2.01
CAST-243ENST00000515160 V9GYV3 84 aa2.52□□□□□ -2.01
CAST-243ENST00000515160 TRAV12-1A0A0B4J245 112 aa2.51□□□□□ -2.01
CAST-243ENST00000515160 SMIM27A0A1W2PRY6 76 aa2.51□□□□□ -2.01
CAST-243ENST00000515160 IFI27P40305 119 aaPredicted RBP2.51□□□□□ -2.01
CAST-243ENST00000515160 ZCCHC13Q8WW36 166 aaKnown RBP2.51□□□□□ -2.01
CAST-243ENST00000515160 TRBV30A0A0K0K1B3 111 aa2.5□□□□□ -2.01
CAST-243ENST00000515160 UBE2D1P51668 147 aa2.5□□□□□ -2.01
CAST-243ENST00000515160 ROMO1P60602 79 aa2.5□□□□□ -2.01
CAST-243ENST00000515160 ADIRFQ15847 76 aa2.5□□□□□ -2.01
CAST-243ENST00000515160 UNQ6190/PRO20217Q6UXQ8 127 aa2.5□□□□□ -2.01
CAST-243ENST00000515160 Q6ZUT4 128 aa2.5□□□□□ -2.01
CAST-243ENST00000515160 TMEM254Q8TBM7 123 aa2.5□□□□□ -2.01
CAST-243ENST00000515160 TRBV7-6A0A0J9YX20 115 aa2.49□□□□□ -2.01
CAST-243ENST00000515160 D6R8Y8 96 aa2.49□□□□□ -2.01
CAST-243ENST00000515160 K7EMI3 77 aa2.49□□□□□ -2.01
CAST-243ENST00000515160 NUPR1O60356 82 aa2.49□□□□□ -2.01
CAST-243ENST00000515160 CKS1BP61024 79 aa2.49□□□□□ -2.01
CAST-243ENST00000515160 SEC11AP67812 179 aa2.49□□□□□ -2.01
CAST-243ENST00000515160 KRTAP6-3Q3LI67 103 aa2.49□□□□□ -2.01
CAST-243ENST00000515160 PRELID3AQ96N28 172 aa2.49□□□□□ -2.01
CAST-243ENST00000515160 C2orf88Q9BSF0 95 aa2.49□□□□□ -2.01
CAST-243ENST00000515160 SMIM2Q9BVW6 85 aa2.49□□□□□ -2.01
CAST-243ENST00000515160 C6orf48Q9UBA6 75 aa2.49□□□□□ -2.01
CAST-243ENST00000515160 RPL39P62891 51 aaKnown RBP2.48□□□□□ -2.01
CAST-243ENST00000515160 MRPL54Q6P161 138 aaKnown RBP2.48□□□□□ -2.01
CAST-243ENST00000515160 Q8N8P6 123 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms