RNA–Protein interactions for RNA: ENST00000514898.1

RUFY3-213, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 4

Gene RUFY3, Length 482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-213ENST00000514898 MACF1Q9UPN3 7388 aaKnown RBP11.71□□□□□ -0.53
RUFY3-213ENST00000514898 MT1FP04733 61 aa11.7□□□□□ -0.54
RUFY3-213ENST00000514898 COPS9Q8WXC6 57 aa11.7□□□□□ -0.54
RUFY3-213ENST00000514898 Q96NJ1 140 aa11.7□□□□□ -0.54
RUFY3-213ENST00000514898 C20orf166-AS1Q96NR2 134 aa11.7□□□□□ -0.54
RUFY3-213ENST00000514898 KRTAP9-3Q9BYQ3 159 aa11.69□□□□□ -0.54
RUFY3-213ENST00000514898 LINC00575Q6W349 94 aa11.68□□□□□ -0.54
RUFY3-213ENST00000514898 Q6ZVH6 145 aa11.68□□□□□ -0.54
RUFY3-213ENST00000514898 A8MUU9 505 aa11.67□□□□□ -0.54
RUFY3-213ENST00000514898 TRAV13-2A0A0B4J235 113 aa11.66□□□□□ -0.54
RUFY3-213ENST00000514898 OCIAD2Q56VL3 154 aa11.66□□□□□ -0.54
RUFY3-213ENST00000514898 Q6ZQY7 126 aa11.66□□□□□ -0.54
RUFY3-213ENST00000514898 C3orf79P0CE67 100 aa11.65□□□□□ -0.54
RUFY3-213ENST00000514898 ANKRD39Q53RE8 183 aa11.65□□□□□ -0.54
RUFY3-213ENST00000514898 HIST1H2BKO60814 126 aa11.63□□□□□ -0.55
RUFY3-213ENST00000514898 HIST1H2BJP06899 126 aa11.63□□□□□ -0.55
RUFY3-213ENST00000514898 HIST1H2BOP23527 126 aa11.63□□□□□ -0.55
RUFY3-213ENST00000514898 HIST1H2BBP33778 126 aa11.63□□□□□ -0.55
RUFY3-213ENST00000514898 HIST1H2BDP58876 126 aa11.63□□□□□ -0.55
RUFY3-213ENST00000514898 HIST1H2BCP62807 126 aa11.63□□□□□ -0.55
RUFY3-213ENST00000514898 HIST2H2BEQ16778 126 aa11.63□□□□□ -0.55
RUFY3-213ENST00000514898 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.63□□□□□ -0.55
RUFY3-213ENST00000514898 HIST1H2BHQ93079 126 aa11.63□□□□□ -0.55
RUFY3-213ENST00000514898 HIST1H2BNQ99877 126 aa11.63□□□□□ -0.55
RUFY3-213ENST00000514898 HIST1H2BMQ99879 126 aa11.63□□□□□ -0.55
RUFY3-213ENST00000514898 TRBV20-1A0A075B6N2 111 aa11.61□□□□□ -0.55
RUFY3-213ENST00000514898 SLC7A5P1Q8MH63 180 aa11.61□□□□□ -0.55
RUFY3-213ENST00000514898 LST1O00453 97 aa11.6□□□□□ -0.55
RUFY3-213ENST00000514898 hADV29S1A0JD25 119 aa11.59□□□□□ -0.55
RUFY3-213ENST00000514898 KRTAP16-1A8MUX0 517 aa11.57□□□□□ -0.56
RUFY3-213ENST00000514898 VAMP3Q15836 100 aa11.57□□□□□ -0.56
RUFY3-213ENST00000514898 H3BUT2 72 aa11.53□□□□□ -0.56
RUFY3-213ENST00000514898 KRTAP10-10P60014 251 aa11.53□□□□□ -0.56
RUFY3-213ENST00000514898 MPLKIPQ8TAP9 179 aa11.53□□□□□ -0.56
RUFY3-213ENST00000514898 KRTDAPP60985 99 aa11.52□□□□□ -0.57
RUFY3-213ENST00000514898 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.51□□□□□ -0.57
RUFY3-213ENST00000514898 ATOH7Q8N100 152 aa11.5□□□□□ -0.57
RUFY3-213ENST00000514898 PPDPFLQ8WWR9 84 aa11.49□□□□□ -0.57
RUFY3-213ENST00000514898 SS18L2Q9UHA2 77 aa11.46□□□□□ -0.57
RUFY3-213ENST00000514898 HRES1P13985 223 aa11.45□□□□□ -0.58
RUFY3-213ENST00000514898 SNHG12Q9BXW3 62 aa11.45□□□□□ -0.58
RUFY3-213ENST00000514898 FAM236DA0A1B0GTK5 79 aa11.44□□□□□ -0.58
RUFY3-213ENST00000514898 FAM236CP0DP71 79 aa11.44□□□□□ -0.58
RUFY3-213ENST00000514898 DSCR10P59022 87 aa11.44□□□□□ -0.58
RUFY3-213ENST00000514898 KRTAP19-6Q3LI70 58 aa11.44□□□□□ -0.58
RUFY3-213ENST00000514898 COA6Q5JTJ3 125 aaKnown RBP11.44□□□□□ -0.58
RUFY3-213ENST00000514898 SCGB1D1O95968 90 aa11.43□□□□□ -0.58
RUFY3-213ENST00000514898 TEN1Q86WV5 123 aa11.39□□□□□ -0.59
RUFY3-213ENST00000514898 A0A087WSZ3 146 aa11.37□□□□□ -0.59
RUFY3-213ENST00000514898 BVES-AS1Q5T3Y7 98 aa11.35□□□□□ -0.59
RUFY3-213ENST00000514898 NOTCH2NLQ7Z3S9 236 aa11.35□□□□□ -0.59
RUFY3-213ENST00000514898 RBM12B-AS1Q9P1G2 102 aa11.35□□□□□ -0.59
RUFY3-213ENST00000514898 SNRPEP62304 92 aaKnown RBP11.31□□□□□ -0.6
RUFY3-213ENST00000514898 LINC00846Q9NV44 126 aa11.31□□□□□ -0.6
RUFY3-213ENST00000514898 NDUFV3P56181 108 aaKnown RBP11.3□□□□□ -0.6
RUFY3-213ENST00000514898 C12orf57Q99622 126 aa11.3□□□□□ -0.6
RUFY3-213ENST00000514898 LINC00313P59037 77 aa11.29□□□□□ -0.6
RUFY3-213ENST00000514898 SIGMAR1Q99720 223 aa11.27□□□□□ -0.61
RUFY3-213ENST00000514898 KRTAP6-3Q3LI67 103 aa11.26□□□□□ -0.61
RUFY3-213ENST00000514898 A0A1W2PNM2 257 aa11.24□□□□□ -0.61
RUFY3-213ENST00000514898 FAM218AQ96MZ4 157 aa11.24□□□□□ -0.61
RUFY3-213ENST00000514898 H3BMG7 143 aa11.21□□□□□ -0.61
RUFY3-213ENST00000514898 IGKV4-1P06312 121 aa11.18□□□□□ -0.62
RUFY3-213ENST00000514898 HIST1H4GQ99525 98 aa11.14□□□□□ -0.63
RUFY3-213ENST00000514898 H0YGX0 51 aa11.13□□□□□ -0.63
RUFY3-213ENST00000514898 LINC00472Q9H8W2 130 aa11.11□□□□□ -0.63
RUFY3-213ENST00000514898 HSBP1L1C9JCN9 74 aa11.1□□□□□ -0.63
RUFY3-213ENST00000514898 DEFB116Q30KQ4 102 aa11.1□□□□□ -0.63
RUFY3-213ENST00000514898 TRBV7-4A0A0J9YYF1 115 aa11.09□□□□□ -0.63
RUFY3-213ENST00000514898 SNCGO76070 127 aa11.09□□□□□ -0.63
RUFY3-213ENST00000514898 MTURNQ8N3F0 131 aa11.09□□□□□ -0.63
RUFY3-213ENST00000514898 NEBP20929 6669 aa11.09□□□□□ -0.63
RUFY3-213ENST00000514898 FABP2P12104 132 aa11.08□□□□□ -0.64
RUFY3-213ENST00000514898 IGHV6-1A0A0B4J1U7 121 aa11.07□□□□□ -0.64
RUFY3-213ENST00000514898 HIST1H2BLQ99880 126 aa11.07□□□□□ -0.64
RUFY3-213ENST00000514898 A8MWP4 228 aa11.06□□□□□ -0.64
RUFY3-213ENST00000514898 HIST3H2BBQ8N257 126 aa11.05□□□□□ -0.64
RUFY3-213ENST00000514898 A0A1B0GX51 115 aa11.04□□□□□ -0.64
RUFY3-213ENST00000514898 SPINK7P58062 85 aa11.04□□□□□ -0.64
RUFY3-213ENST00000514898 Q8N9P0 234 aaPredicted RBP11.03□□□□□ -0.64
RUFY3-213ENST00000514898 A0A0B4J2C4 111 aa11.02□□□□□ -0.65
RUFY3-213ENST00000514898 RAB37Q96AX2 223 aa11.02□□□□□ -0.65
RUFY3-213ENST00000514898 GHRHP01286 108 aa11.01□□□□□ -0.65
RUFY3-213ENST00000514898 COX8AP10176 69 aa11.01□□□□□ -0.65
RUFY3-213ENST00000514898 ZCCHC13Q8WW36 166 aaKnown RBP11.01□□□□□ -0.65
RUFY3-213ENST00000514898 ANKRD29Q8N6D5 301 aa11□□□□□ -0.65
RUFY3-213ENST00000514898 DLEU1O43261 78 aa10.97□□□□□ -0.65
RUFY3-213ENST00000514898 A0A1B0GVX0 72 aa10.95□□□□□ -0.66
RUFY3-213ENST00000514898 C8orf87E5RJ46 101 aa10.95□□□□□ -0.66
RUFY3-213ENST00000514898 A0A1B0GV72 72 aa10.94□□□□□ -0.66
RUFY3-213ENST00000514898 S100A2P29034 98 aa10.92□□□□□ -0.66
RUFY3-213ENST00000514898 CCKP06307 115 aa10.91□□□□□ -0.66
RUFY3-213ENST00000514898 TRIAP1O43715 76 aa10.89□□□□□ -0.67
RUFY3-213ENST00000514898 TRACP01848 142 aa10.89□□□□□ -0.67
RUFY3-213ENST00000514898 WFDC13Q8IUB5 93 aa10.89□□□□□ -0.67
RUFY3-213ENST00000514898 HIGD1BQ9P298 99 aa10.89□□□□□ -0.67
RUFY3-213ENST00000514898 MUC12Q9UKN1 5478 aa10.88□□□□□ -0.67
RUFY3-213ENST00000514898 PRO1854Q9UHT4 67 aa10.87□□□□□ -0.67
RUFY3-213ENST00000514898 C2orf91Q6ZV80 131 aa10.86□□□□□ -0.67
RUFY3-213ENST00000514898 C14orf144Q96I85 54 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms