RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 TEX15Q9BXT5 2789 aa-0.74□□□□□ -2.53
NEDD4-211ENST00000514893 DEFB110Q30KQ9 67 aa-0.74□□□□□ -2.53
NEDD4-211ENST00000514893 Q9H521 79 aa-0.74□□□□□ -2.53
NEDD4-211ENST00000514893 ACACAQ13085 2346 aa-0.74□□□□□ -2.53
NEDD4-211ENST00000514893 NDUFB1O75438 58 aa-0.75□□□□□ -2.53
NEDD4-211ENST00000514893 SNHG12Q9BXW3 62 aa-0.75□□□□□ -2.53
NEDD4-211ENST00000514893 CEP162Q5TB80 1403 aa-0.75□□□□□ -2.53
NEDD4-211ENST00000514893 PKD1L2Q7Z442 2459 aa-0.75□□□□□ -2.53
NEDD4-211ENST00000514893 MUC17Q685J3 4493 aa-0.75□□□□□ -2.53
NEDD4-211ENST00000514893 NIPBLQ6KC79 2804 aaeCLIP-0.76□□□□□ -2.53
NEDD4-211ENST00000514893 CEBPZOSA8MTT3 80 aa-0.76□□□□□ -2.53
NEDD4-211ENST00000514893 PKIAP61925 76 aa-0.76□□□□□ -2.53
NEDD4-211ENST00000514893 DEFB106AQ8N104 65 aa-0.76□□□□□ -2.53
NEDD4-211ENST00000514893 CCNB3Q8WWL7 1395 aa-0.76□□□□□ -2.53
NEDD4-211ENST00000514893 NCOA2Q15596 1464 aa-0.76□□□□□ -2.53
NEDD4-211ENST00000514893 MAGI3Q5TCQ9 1506 aa-0.76□□□□□ -2.53
NEDD4-211ENST00000514893 TMEM131LA2VDJ0 1609 aa-0.76□□□□□ -2.53
NEDD4-211ENST00000514893 CEP290O15078 2479 aa-0.76□□□□□ -2.53
NEDD4-211ENST00000514893 VPS13DQ5THJ4 4388 aa-0.77□□□□□ -2.53
NEDD4-211ENST00000514893 DDX60LQ5H9U9 1706 aaKnown RBP-0.77□□□□□ -2.53
NEDD4-211ENST00000514893 ZNF831Q5JPB2 1677 aa-0.77□□□□□ -2.53
NEDD4-211ENST00000514893 MAP3K1Q13233 1512 aa-0.77□□□□□ -2.53
NEDD4-211ENST00000514893 S100A8P05109 93 aa-0.77□□□□□ -2.53
NEDD4-211ENST00000514893 PRLHP81277 87 aa-0.77□□□□□ -2.53
NEDD4-211ENST00000514893 CCDC168Q8NDH2 2452 aa-0.77□□□□□ -2.53
NEDD4-211ENST00000514893 EPPK1P58107 5090 aaKnown RBP-0.78□□□□□ -2.53
NEDD4-211ENST00000514893 IFI6P09912 130 aa-0.78□□□□□ -2.53
NEDD4-211ENST00000514893 IAPPP10997 89 aa-0.78□□□□□ -2.53
NEDD4-211ENST00000514893 IFI27P40305 119 aaPredicted RBP-0.78□□□□□ -2.53
NEDD4-211ENST00000514893 S100A16Q96FQ6 103 aaKnown RBP-0.78□□□□□ -2.53
NEDD4-211ENST00000514893 DEPDC5O75140 1603 aa-0.78□□□□□ -2.54
NEDD4-211ENST00000514893 NBEAL2Q6ZNJ1 2754 aa-0.79□□□□□ -2.54
NEDD4-211ENST00000514893 URB2Q14146 1524 aaKnown RBP-0.79□□□□□ -2.54
NEDD4-211ENST00000514893 H0YAA0 97 aa-0.79□□□□□ -2.54
NEDD4-211ENST00000514893 SNRPFP62306 86 aaKnown RBP-0.79□□□□□ -2.54
NEDD4-211ENST00000514893 LINC00643Q86TS7 51 aa-0.79□□□□□ -2.54
NEDD4-211ENST00000514893 PIK3C2BO00750 1634 aa-0.79□□□□□ -2.54
NEDD4-211ENST00000514893 KIF14Q15058 1648 aa-0.79□□□□□ -2.54
NEDD4-211ENST00000514893 ANK3Q12955 4377 aaKnown RBP-0.79□□□□□ -2.54
NEDD4-211ENST00000514893 ANKRD36CQ5JPF3 1778 aa-0.8□□□□□ -2.54
NEDD4-211ENST00000514893 ARFGEF2Q9Y6D5 1785 aa-0.8□□□□□ -2.54
NEDD4-211ENST00000514893 PLCH1Q4KWH8 1693 aa-0.8□□□□□ -2.54
NEDD4-211ENST00000514893 UMAD1C9J7I0 102 aa-0.8□□□□□ -2.54
NEDD4-211ENST00000514893 K7EP34 96 aa-0.8□□□□□ -2.54
NEDD4-211ENST00000514893 NDUFA4O00483 81 aa-0.8□□□□□ -2.54
NEDD4-211ENST00000514893 DEFB130BP0DP73 79 aa-0.8□□□□□ -2.54
NEDD4-211ENST00000514893 DEFB130AP0DP74 79 aa-0.8□□□□□ -2.54
NEDD4-211ENST00000514893 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.8□□□□□ -2.54
NEDD4-211ENST00000514893 A0A0C4DFX4 3053 aa-0.8□□□□□ -2.54
NEDD4-211ENST00000514893 VPS8Q8N3P4 1428 aa-0.81□□□□□ -2.54
NEDD4-211ENST00000514893 RYR3Q15413 4870 aa-0.81□□□□□ -2.54
NEDD4-211ENST00000514893 APOBP04114 4563 aaKnown RBP-0.81□□□□□ -2.54
NEDD4-211ENST00000514893 RABAC1Q9UI14 185 aa-0.81□□□□□ -2.54
NEDD4-211ENST00000514893 WIZO95785 1651 aa-0.81□□□□□ -2.54
NEDD4-211ENST00000514893 ACACBO00763 2458 aa-0.82□□□□□ -2.54
NEDD4-211ENST00000514893 TRIOO75962 3097 aa-0.82□□□□□ -2.54
NEDD4-211ENST00000514893 MAP3K4Q9Y6R4 1608 aa-0.82□□□□□ -2.54
NEDD4-211ENST00000514893 DIP2BQ9P265 1576 aa-0.83□□□□□ -2.54
NEDD4-211ENST00000514893 A0A087WXM4 84 aa-0.83□□□□□ -2.54
NEDD4-211ENST00000514893 PYY3Q5JQD4 70 aa-0.83□□□□□ -2.54
NEDD4-211ENST00000514893 DNAH11Q96DT5 4516 aa-0.83□□□□□ -2.54
NEDD4-211ENST00000514893 RICTORQ6R327 1708 aa-0.84□□□□□ -2.54
NEDD4-211ENST00000514893 ABCC3O15438 1527 aa-0.84□□□□□ -2.54
NEDD4-211ENST00000514893 BIRC6Q9NR09 4857 aa-0.84□□□□□ -2.54
NEDD4-211ENST00000514893 FAM186AA6NE01 2351 aa-0.84□□□□□ -2.54
NEDD4-211ENST00000514893 RIF1Q5UIP0 2472 aaKnown RBP-0.84□□□□□ -2.54
NEDD4-211ENST00000514893 NREPQ16612 68 aa-0.84□□□□□ -2.54
NEDD4-211ENST00000514893 V9GYS6 101 aa-0.84□□□□□ -2.54
NEDD4-211ENST00000514893 LAMA2P24043 3122 aaKnown RBP-0.84□□□□□ -2.54
NEDD4-211ENST00000514893 CFAP43Q8NDM7 1665 aa-0.84□□□□□ -2.54
NEDD4-211ENST00000514893 DNAH1Q9P2D7 4330 aa-0.85□□□□□ -2.55
NEDD4-211ENST00000514893 LCE6AA0A183 80 aa-0.85□□□□□ -2.55
NEDD4-211ENST00000514893 PVALEFA0A1B0GWK0 134 aa-0.85□□□□□ -2.55
NEDD4-211ENST00000514893 DEFB1P60022 68 aa-0.85□□□□□ -2.55
NEDD4-211ENST00000514893 ITSN1Q15811 1721 aa-0.85□□□□□ -2.55
NEDD4-211ENST00000514893 KANTRA0A1W2PQU2 76 aa-0.86□□□□□ -2.55
NEDD4-211ENST00000514893 LYNX1G3V0Z9 82 aa-0.86□□□□□ -2.55
NEDD4-211ENST00000514893 RYR1P21817 5038 aa-0.86□□□□□ -2.55
NEDD4-211ENST00000514893 PARP4Q9UKK3 1724 aaKnown RBP-0.86□□□□□ -2.55
NEDD4-211ENST00000514893 PPLO60437 1756 aa-0.87□□□□□ -2.55
NEDD4-211ENST00000514893 MT1HP80294 61 aa-0.87□□□□□ -2.55
NEDD4-211ENST00000514893 DNAH2Q9P225 4427 aa-0.87□□□□□ -2.55
NEDD4-211ENST00000514893 C5orf42Q9H799 3197 aa-0.87□□□□□ -2.55
NEDD4-211ENST00000514893 FRYQ5TBA9 3013 aa-0.87□□□□□ -2.55
NEDD4-211ENST00000514893 RANBP2P49792 3224 aaKnown RBP-0.88□□□□□ -2.55
NEDD4-211ENST00000514893 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.88□□□□□ -2.55
NEDD4-211ENST00000514893 HYDINQ4G0P3 5121 aa-0.88□□□□□ -2.55
NEDD4-211ENST00000514893 ATP5EP2Q5VTU8 51 aa-0.88□□□□□ -2.55
NEDD4-211ENST00000514893 USP9XQ93008 2570 aaPredicted RBP-0.88□□□□□ -2.55
NEDD4-211ENST00000514893 CCDC88BA6NC98 1476 aa-0.88□□□□□ -2.55
NEDD4-211ENST00000514893 ITPR1Q14643 2758 aa-0.88□□□□□ -2.55
NEDD4-211ENST00000514893 THOC2Q8NI27 1593 aaKnown RBP-0.88□□□□□ -2.55
NEDD4-211ENST00000514893 HFM1A2PYH4 1435 aa-0.89□□□□□ -2.55
NEDD4-211ENST00000514893 KIAA0586Q9BVV6 1533 aa-0.89□□□□□ -2.55
NEDD4-211ENST00000514893 MRPL33O75394 65 aaKnown RBP-0.89□□□□□ -2.55
NEDD4-211ENST00000514893 SMIM13P0DJ93 91 aa-0.89□□□□□ -2.55
NEDD4-211ENST00000514893 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.89□□□□□ -2.55
NEDD4-211ENST00000514893 TTC37Q6PGP7 1564 aa-0.89□□□□□ -2.55
NEDD4-211ENST00000514893 TLN2Q9Y4G6 2542 aa-0.9□□□□□ -2.55
NEDD4-211ENST00000514893 PLECQ15149 4684 aaKnown RBP-0.91□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms