RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 KRTAP19-6Q3LI70 58 aa5.54□□□□□ -1.52
DDX41-216ENST00000513562 ATOH7Q8N100 152 aa5.54□□□□□ -1.52
DDX41-216ENST00000513562 ADAMTSL4-AS1Q5T5F5 129 aa5.53□□□□□ -1.52
DDX41-216ENST00000513562 OBSCN-AS1Q96MR7 158 aa5.53□□□□□ -1.52
DDX41-216ENST00000513562 LGALS3P17931 250 aaKnown RBP5.52□□□□□ -1.53
DDX41-216ENST00000513562 COX7BP24311 80 aa5.52□□□□□ -1.53
DDX41-216ENST00000513562 KRTAP10-10P60014 251 aa5.52□□□□□ -1.53
DDX41-216ENST00000513562 OR13C6PQ8NH95 151 aa5.52□□□□□ -1.53
DDX41-216ENST00000513562 IGLV5-48A0A075B6I7 105 aa5.51□□□□□ -1.53
DDX41-216ENST00000513562 E9PLD3 99 aa5.51□□□□□ -1.53
DDX41-216ENST00000513562 PYY3Q5JQD4 70 aa5.51□□□□□ -1.53
DDX41-216ENST00000513562 PCP2Q8IVA1 136 aa5.51□□□□□ -1.53
DDX41-216ENST00000513562 VAMP8Q9BV40 100 aa5.51□□□□□ -1.53
DDX41-216ENST00000513562 SPANXCQ9NY87 97 aa5.51□□□□□ -1.53
DDX41-216ENST00000513562 TRBV20-1A0A075B6N2 111 aa5.5□□□□□ -1.53
DDX41-216ENST00000513562 A0A0J9YXY3 114 aa5.5□□□□□ -1.53
DDX41-216ENST00000513562 C6orf99Q4VX62 202 aa5.5□□□□□ -1.53
DDX41-216ENST00000513562 SPANXDQ9BXN6 97 aa5.5□□□□□ -1.53
DDX41-216ENST00000513562 LOC105371267A0A1B0GV96 52 aa5.49□□□□□ -1.53
DDX41-216ENST00000513562 SMIM6P0DI80 62 aa5.49□□□□□ -1.53
DDX41-216ENST00000513562 PAM16Q9Y3D7 125 aa5.49□□□□□ -1.53
DDX41-216ENST00000513562 SPATA45Q537H7 98 aa5.48□□□□□ -1.53
DDX41-216ENST00000513562 ANKRD39Q53RE8 183 aa5.48□□□□□ -1.53
DDX41-216ENST00000513562 TMEM238LA0A1B0GVL6 79 aa5.47□□□□□ -1.53
DDX41-216ENST00000513562 ZNF815PA8K554 130 aa5.47□□□□□ -1.53
DDX41-216ENST00000513562 LINC00308Q8TCZ7 52 aa5.47□□□□□ -1.53
DDX41-216ENST00000513562 TRBV7-6A0A0J9YX20 115 aa5.46□□□□□ -1.54
DDX41-216ENST00000513562 LITAFQ99732 161 aa5.46□□□□□ -1.54
DDX41-216ENST00000513562 SMCPP49901 116 aaPredicted RBP5.45□□□□□ -1.54
DDX41-216ENST00000513562 SCGB1D4Q6XE38 83 aa5.45□□□□□ -1.54
DDX41-216ENST00000513562 C20orf166-AS1Q96NR2 134 aa5.45□□□□□ -1.54
DDX41-216ENST00000513562 A0A1B0GWB2 263 aa5.44□□□□□ -1.54
DDX41-216ENST00000513562 Q96NJ1 140 aa5.44□□□□□ -1.54
DDX41-216ENST00000513562 NEBP20929 6669 aa5.44□□□□□ -1.54
DDX41-216ENST00000513562 COX8AP10176 69 aa5.43□□□□□ -1.54
DDX41-216ENST00000513562 TTTY13Q9BZ97 58 aa5.43□□□□□ -1.54
DDX41-216ENST00000513562 TRBV7-7A0A0K0K1E9 115 aa5.42□□□□□ -1.54
DDX41-216ENST00000513562 FAM236DA0A1B0GTK5 79 aa5.42□□□□□ -1.54
DDX41-216ENST00000513562 A8MUU9 505 aa5.42□□□□□ -1.54
DDX41-216ENST00000513562 FAM236CP0DP71 79 aa5.42□□□□□ -1.54
DDX41-216ENST00000513562 IGFL1Q6UW32 110 aa5.42□□□□□ -1.54
DDX41-216ENST00000513562 LINC00518Q8N0U6 118 aa5.42□□□□□ -1.54
DDX41-216ENST00000513562 C14orf144Q96I85 54 aa5.42□□□□□ -1.54
DDX41-216ENST00000513562 C12orf57Q99622 126 aa5.42□□□□□ -1.54
DDX41-216ENST00000513562 TIMM17BO60830 172 aa5.41□□□□□ -1.54
DDX41-216ENST00000513562 F8WEM9 126 aa5.4□□□□□ -1.54
DDX41-216ENST00000513562 DLEU1O43261 78 aa5.4□□□□□ -1.54
DDX41-216ENST00000513562 GHRHP01286 108 aa5.4□□□□□ -1.54
DDX41-216ENST00000513562 TSTD3H0UI37 97 aa5.39□□□□□ -1.55
DDX41-216ENST00000513562 MPLKIPQ8TAP9 179 aa5.39□□□□□ -1.55
DDX41-216ENST00000513562 COPS9Q8WXC6 57 aa5.39□□□□□ -1.55
DDX41-216ENST00000513562 CLEC2BQ92478 149 aa5.39□□□□□ -1.55
DDX41-216ENST00000513562 UQCR10Q9UDW1 63 aa5.39□□□□□ -1.55
DDX41-216ENST00000513562 MUC12Q9UKN1 5478 aa5.38□□□□□ -1.55
DDX41-216ENST00000513562 A4D1N5 150 aa5.38□□□□□ -1.55
DDX41-216ENST00000513562 Q6JHZ5 121 aa5.38□□□□□ -1.55
DDX41-216ENST00000513562 Q6ZVH6 145 aa5.38□□□□□ -1.55
DDX41-216ENST00000513562 NHP2Q9NX24 153 aaKnown RBP5.38□□□□□ -1.55
DDX41-216ENST00000513562 LST1O00453 97 aa5.36□□□□□ -1.55
DDX41-216ENST00000513562 HIST1H4GQ99525 98 aa5.36□□□□□ -1.55
DDX41-216ENST00000513562 RBM12B-AS1Q9P1G2 102 aa5.36□□□□□ -1.55
DDX41-216ENST00000513562 HIGD1BQ9P298 99 aa5.36□□□□□ -1.55
DDX41-216ENST00000513562 KRTAP16-1A8MUX0 517 aa5.35□□□□□ -1.55
DDX41-216ENST00000513562 IFITM1P13164 125 aa5.35□□□□□ -1.55
DDX41-216ENST00000513562 HRES1P13985 223 aa5.35□□□□□ -1.55
DDX41-216ENST00000513562 C2orf91Q6ZV80 131 aa5.35□□□□□ -1.55
DDX41-216ENST00000513562 TRAV13-2A0A0B4J235 113 aa5.33□□□□□ -1.56
DDX41-216ENST00000513562 A6NDN8 102 aa5.33□□□□□ -1.56
DDX41-216ENST00000513562 HSD52Q0P140 79 aa5.33□□□□□ -1.56
DDX41-216ENST00000513562 KRTAP20-1Q3LI63 56 aa5.32□□□□□ -1.56
DDX41-216ENST00000513562 MUSTN1Q8IVN3 82 aa5.32□□□□□ -1.56
DDX41-216ENST00000513562 OCIAD2Q56VL3 154 aa5.31□□□□□ -1.56
DDX41-216ENST00000513562 Q6ZQY7 126 aa5.3□□□□□ -1.56
DDX41-216ENST00000513562 CEND1Q8N111 149 aa5.3□□□□□ -1.56
DDX41-216ENST00000513562 SMIM11BQ8TCY0 68 aa5.3□□□□□ -1.56
DDX41-216ENST00000513562 M0R143 59 aa5.29□□□□□ -1.56
DDX41-216ENST00000513562 DSCR10P59022 87 aa5.28□□□□□ -1.56
DDX41-216ENST00000513562 LINC00575Q6W349 94 aa5.28□□□□□ -1.56
DDX41-216ENST00000513562 SS18L2Q9UHA2 77 aa5.28□□□□□ -1.56
DDX41-216ENST00000513562 NOTCH2NLQ7Z3S9 236 aa5.27□□□□□ -1.57
DDX41-216ENST00000513562 RAB37Q96AX2 223 aa5.27□□□□□ -1.57
DDX41-216ENST00000513562 A0A0B4J2C4 111 aa5.26□□□□□ -1.57
DDX41-216ENST00000513562 PCP4L1A6NKN8 68 aa5.26□□□□□ -1.57
DDX41-216ENST00000513562 FXYD2P54710 66 aa5.26□□□□□ -1.57
DDX41-216ENST00000513562 hADV29S1A0JD25 119 aa5.25□□□□□ -1.57
DDX41-216ENST00000513562 A8MWP4 228 aa5.25□□□□□ -1.57
DDX41-216ENST00000513562 VAMP3Q15836 100 aa5.25□□□□□ -1.57
DDX41-216ENST00000513562 BATFQ16520 125 aa5.25□□□□□ -1.57
DDX41-216ENST00000513562 BVES-AS1Q5T3Y7 98 aa5.25□□□□□ -1.57
DDX41-216ENST00000513562 Q8N9P0 234 aaPredicted RBP5.25□□□□□ -1.57
DDX41-216ENST00000513562 H3BUT2 72 aa5.24□□□□□ -1.57
DDX41-216ENST00000513562 MTURNQ8N3F0 131 aa5.23□□□□□ -1.57
DDX41-216ENST00000513562 PPDPFLQ8WWR9 84 aa5.23□□□□□ -1.57
DDX41-216ENST00000513562 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.22□□□□□ -1.57
DDX41-216ENST00000513562 PRO1854Q9UHT4 67 aa5.22□□□□□ -1.57
DDX41-216ENST00000513562 K7ERJ3 54 aa5.21□□□□□ -1.58
DDX41-216ENST00000513562 A0A087WSZ3 146 aa5.2□□□□□ -1.58
DDX41-216ENST00000513562 LINC00313P59037 77 aa5.2□□□□□ -1.58
DDX41-216ENST00000513562 TEN1Q86WV5 123 aa5.2□□□□□ -1.58
DDX41-216ENST00000513562 SNHG12Q9BXW3 62 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms