RNA–Protein interactions for RNA: ENST00000512665.5

NEDD9-213, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-213ENST00000512665 LIMD2Q9BT23 127 aa5.02□□□□□ -1.61
NEDD9-213ENST00000512665 TRBV10-3A0A0K0K1G6 114 aa5.01□□□□□ -1.61
NEDD9-213ENST00000512665 LOC105371267A0A1B0GV96 52 aa5.01□□□□□ -1.61
NEDD9-213ENST00000512665 PRYO14603 147 aa5.01□□□□□ -1.61
NEDD9-213ENST00000512665 C2orf91Q6ZV80 131 aa5.01□□□□□ -1.61
NEDD9-213ENST00000512665 MUSTN1Q8IVN3 82 aa5.01□□□□□ -1.61
NEDD9-213ENST00000512665 CBY1Q9Y3M2 126 aa5.01□□□□□ -1.61
NEDD9-213ENST00000512665 SMIM6P0DI80 62 aa5□□□□□ -1.61
NEDD9-213ENST00000512665 DDTP30046 118 aa5□□□□□ -1.61
NEDD9-213ENST00000512665 NPC2P61916 151 aa5□□□□□ -1.61
NEDD9-213ENST00000512665 S100A12P80511 92 aa5□□□□□ -1.61
NEDD9-213ENST00000512665 GPR98Q8WXG9 6306 aa5□□□□□ -1.61
NEDD9-213ENST00000512665 NCR3O14931 201 aa4.99□□□□□ -1.61
NEDD9-213ENST00000512665 TAL2Q16559 108 aa4.99□□□□□ -1.61
NEDD9-213ENST00000512665 SMCR5Q8TEV8 140 aa4.98□□□□□ -1.61
NEDD9-213ENST00000512665 A4D1N5 150 aa4.97□□□□□ -1.61
NEDD9-213ENST00000512665 S100A7L2Q5SY68 101 aa4.97□□□□□ -1.61
NEDD9-213ENST00000512665 GAGE2AQ6NT46 116 aa4.97□□□□□ -1.61
NEDD9-213ENST00000512665 HIST1H4GQ99525 98 aa4.97□□□□□ -1.61
NEDD9-213ENST00000512665 UQCR10Q9UDW1 63 aa4.97□□□□□ -1.61
NEDD9-213ENST00000512665 TRAV23DV6A0A075B6W5 121 aa4.96□□□□□ -1.62
NEDD9-213ENST00000512665 TRAV13-2A0A0B4J235 113 aa4.96□□□□□ -1.62
NEDD9-213ENST00000512665 TRBV7-6A0A0J9YX20 115 aa4.96□□□□□ -1.62
NEDD9-213ENST00000512665 B5MCH6 92 aa4.96□□□□□ -1.62
NEDD9-213ENST00000512665 KRTAP5-9P26371 169 aa4.96□□□□□ -1.62
NEDD9-213ENST00000512665 KRTAP4-8Q9BYQ9 185 aa4.96□□□□□ -1.62
NEDD9-213ENST00000512665 ZNF73O43830 326 aaPredicted RBP4.95□□□□□ -1.62
NEDD9-213ENST00000512665 Q6ZRX8 168 aa4.94□□□□□ -1.62
NEDD9-213ENST00000512665 CEND1Q8N111 149 aa4.94□□□□□ -1.62
NEDD9-213ENST00000512665 OR13C6PQ8NH95 151 aa4.94□□□□□ -1.62
NEDD9-213ENST00000512665 A0A0B4J2C4 111 aa4.93□□□□□ -1.62
NEDD9-213ENST00000512665 ETDCA0A1B0GVM5 59 aa4.93□□□□□ -1.62
NEDD9-213ENST00000512665 HSD52Q0P140 79 aa4.93□□□□□ -1.62
NEDD9-213ENST00000512665 A0A1B0GWB2 263 aa4.92□□□□□ -1.62
NEDD9-213ENST00000512665 A6NDN8 102 aa4.92□□□□□ -1.62
NEDD9-213ENST00000512665 HINT1P49773 126 aaPredicted RBP4.92□□□□□ -1.62
NEDD9-213ENST00000512665 ELOF1P60002 83 aaKnown RBP4.92□□□□□ -1.62
NEDD9-213ENST00000512665 C9orf153Q5TBE3 101 aa4.92□□□□□ -1.62
NEDD9-213ENST00000512665 SMIM11BQ8TCY0 68 aa4.92□□□□□ -1.62
NEDD9-213ENST00000512665 C12orf57Q99622 126 aa4.92□□□□□ -1.62
NEDD9-213ENST00000512665 Q9BRP9 147 aa4.92□□□□□ -1.62
NEDD9-213ENST00000512665 TMEM238LA0A1B0GVL6 79 aa4.91□□□□□ -1.62
NEDD9-213ENST00000512665 FXYD2P54710 66 aa4.91□□□□□ -1.62
NEDD9-213ENST00000512665 C6orf99Q4VX62 202 aa4.91□□□□□ -1.62
NEDD9-213ENST00000512665 PRO1933Q9H354 126 aa4.9□□□□□ -1.63
NEDD9-213ENST00000512665 DHRS4-AS1Q9P1J3 65 aa4.9□□□□□ -1.63
NEDD9-213ENST00000512665 COX7BP24311 80 aa4.89□□□□□ -1.63
NEDD9-213ENST00000512665 Q5XG85 94 aa4.89□□□□□ -1.63
NEDD9-213ENST00000512665 PRO1854Q9UHT4 67 aa4.89□□□□□ -1.63
NEDD9-213ENST00000512665 TSTD3H0UI37 97 aa4.88□□□□□ -1.63
NEDD9-213ENST00000512665 ERC2-IT1O76042 136 aa4.88□□□□□ -1.63
NEDD9-213ENST00000512665 BVES-AS1Q5T3Y7 98 aa4.88□□□□□ -1.63
NEDD9-213ENST00000512665 ATP11AUNQ6ZP68 121 aa4.88□□□□□ -1.63
NEDD9-213ENST00000512665 RAB37Q96AX2 223 aa4.88□□□□□ -1.63
NEDD9-213ENST00000512665 SPRR1BP22528 89 aa4.87□□□□□ -1.63
NEDD9-213ENST00000512665 VAMP3Q15836 100 aa4.87□□□□□ -1.63
NEDD9-213ENST00000512665 C20orf166-AS1Q96NR2 134 aa4.87□□□□□ -1.63
NEDD9-213ENST00000512665 TRBV20-1A0A075B6N2 111 aa4.86□□□□□ -1.63
NEDD9-213ENST00000512665 CD164Q04900 197 aa4.86□□□□□ -1.63
NEDD9-213ENST00000512665 LINC00575Q6W349 94 aa4.86□□□□□ -1.63
NEDD9-213ENST00000512665 IGLV5-48A0A075B6I7 105 aa4.85□□□□□ -1.63
NEDD9-213ENST00000512665 H0YGX0 51 aa4.85□□□□□ -1.63
NEDD9-213ENST00000512665 C1orf195Q5TG92 126 aa4.85□□□□□ -1.63
NEDD9-213ENST00000512665 Q75L30 129 aa4.85□□□□□ -1.63
NEDD9-213ENST00000512665 NHP2Q9NX24 153 aaKnown RBP4.85□□□□□ -1.63
NEDD9-213ENST00000512665 M0R143 59 aa4.84□□□□□ -1.63
NEDD9-213ENST00000512665 A0A1B0GX51 115 aa4.83□□□□□ -1.64
NEDD9-213ENST00000512665 ST20-AS1Q8NBB2 130 aa4.83□□□□□ -1.64
NEDD9-213ENST00000512665 KRTAP2-2Q9BYT5 123 aa4.83□□□□□ -1.64
NEDD9-213ENST00000512665 KRTAP2-1Q9BYU5 128 aa4.83□□□□□ -1.64
NEDD9-213ENST00000512665 hADV29S1A0JD25 119 aa4.82□□□□□ -1.64
NEDD9-213ENST00000512665 H7C2G1 150 aa4.82□□□□□ -1.64
NEDD9-213ENST00000512665 HRCT1Q6UXD1 115 aa4.82□□□□□ -1.64
NEDD9-213ENST00000512665 TEX49A0A1B0GTD5 131 aa4.81□□□□□ -1.64
NEDD9-213ENST00000512665 K7ERJ3 54 aa4.81□□□□□ -1.64
NEDD9-213ENST00000512665 TRIAP1O43715 76 aa4.81□□□□□ -1.64
NEDD9-213ENST00000512665 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.81□□□□□ -1.64
NEDD9-213ENST00000512665 SMIM29Q86T20 159 aa4.8□□□□□ -1.64
NEDD9-213ENST00000512665 PPDPFLQ8WWR9 84 aa4.8□□□□□ -1.64
NEDD9-213ENST00000512665 SNCGO76070 127 aa4.79□□□□□ -1.64
NEDD9-213ENST00000512665 COX6CP09669 75 aa4.79□□□□□ -1.64
NEDD9-213ENST00000512665 Q1RN00 199 aa4.79□□□□□ -1.64
NEDD9-213ENST00000512665 OCIAD2Q56VL3 154 aa4.79□□□□□ -1.64
NEDD9-213ENST00000512665 FAM218AQ96MZ4 157 aa4.79□□□□□ -1.64
NEDD9-213ENST00000512665 Q6ZQY7 126 aa4.78□□□□□ -1.64
NEDD9-213ENST00000512665 LAMTOR3Q9UHA4 124 aa4.78□□□□□ -1.64
NEDD9-213ENST00000512665 H3BQ85 93 aa4.76□□□□□ -1.65
NEDD9-213ENST00000512665 PSMB2P49721 201 aa4.76□□□□□ -1.65
NEDD9-213ENST00000512665 DEFB105AQ8NG35 78 aa4.76□□□□□ -1.65
NEDD9-213ENST00000512665 FAM236DA0A1B0GTK5 79 aa4.75□□□□□ -1.65
NEDD9-213ENST00000512665 LST1O00453 97 aa4.75□□□□□ -1.65
NEDD9-213ENST00000512665 TRACP01848 142 aa4.75□□□□□ -1.65
NEDD9-213ENST00000512665 FAM236CP0DP71 79 aa4.75□□□□□ -1.65
NEDD9-213ENST00000512665 LCE3BQ5TA77 95 aa4.75□□□□□ -1.65
NEDD9-213ENST00000512665 CLEC2BQ92478 149 aa4.75□□□□□ -1.65
NEDD9-213ENST00000512665 MPLKIPQ8TAP9 179 aa4.74□□□□□ -1.65
NEDD9-213ENST00000512665 SNHG12Q9BXW3 62 aa4.74□□□□□ -1.65
NEDD9-213ENST00000512665 C9orf118A6NHY6 69 aa4.73□□□□□ -1.65
NEDD9-213ENST00000512665 A6NN06 94 aa4.73□□□□□ -1.65
NEDD9-213ENST00000512665 TAX1BP3O14907 124 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 213.8 ms