RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 TEN1Q86WV5 123 aa4.26□□□□□ -1.73
PDLIM5-215ENST00000511586 FAM218AQ96MZ4 157 aa4.26□□□□□ -1.73
PDLIM5-215ENST00000511586 B5MCH6 92 aa4.25□□□□□ -1.73
PDLIM5-215ENST00000511586 ZNF73O43830 326 aaPredicted RBP4.25□□□□□ -1.73
PDLIM5-215ENST00000511586 FAM229BQ4G0N7 80 aa4.25□□□□□ -1.73
PDLIM5-215ENST00000511586 SMCR5Q8TEV8 140 aa4.25□□□□□ -1.73
PDLIM5-215ENST00000511586 PPDPFLQ8WWR9 84 aa4.25□□□□□ -1.73
PDLIM5-215ENST00000511586 ANAPC11Q9NYG5 84 aa4.25□□□□□ -1.73
PDLIM5-215ENST00000511586 TNXBP22105 4242 aa4.25□□□□□ -1.73
PDLIM5-215ENST00000511586 A0A087X002 238 aa4.24□□□□□ -1.73
PDLIM5-215ENST00000511586 A0A1B0GX51 115 aa4.24□□□□□ -1.73
PDLIM5-215ENST00000511586 Q6ZRX8 168 aa4.24□□□□□ -1.73
PDLIM5-215ENST00000511586 ZNF706Q9Y5V0 76 aaPredicted RBP4.24□□□□□ -1.73
PDLIM5-215ENST00000511586 TRBV7-6A0A0J9YX20 115 aa4.23□□□□□ -1.73
PDLIM5-215ENST00000511586 BAALC-AS2P0C853 105 aa4.23□□□□□ -1.73
PDLIM5-215ENST00000511586 COX7BP24311 80 aa4.23□□□□□ -1.73
PDLIM5-215ENST00000511586 TYMSOSQ8TAI1 123 aa4.23□□□□□ -1.73
PDLIM5-215ENST00000511586 SPRR4Q96PI1 79 aa4.23□□□□□ -1.73
PDLIM5-215ENST00000511586 ORMDL1Q9P0S3 153 aa4.23□□□□□ -1.73
PDLIM5-215ENST00000511586 hADV29S1A0JD25 119 aa4.22□□□□□ -1.73
PDLIM5-215ENST00000511586 ELOF1P60002 83 aaKnown RBP4.22□□□□□ -1.73
PDLIM5-215ENST00000511586 LCE2AQ5TA79 106 aaPredicted RBP4.22□□□□□ -1.73
PDLIM5-215ENST00000511586 LINC00575Q6W349 94 aa4.22□□□□□ -1.73
PDLIM5-215ENST00000511586 Q9BRP9 147 aa4.22□□□□□ -1.73
PDLIM5-215ENST00000511586 TEX49A0A1B0GTD5 131 aa4.21□□□□□ -1.74
PDLIM5-215ENST00000511586 ERC2-IT1O76042 136 aa4.21□□□□□ -1.74
PDLIM5-215ENST00000511586 KRTAP13-2Q52LG2 175 aa4.21□□□□□ -1.74
PDLIM5-215ENST00000511586 VPS25Q9BRG1 176 aa4.21□□□□□ -1.74
PDLIM5-215ENST00000511586 GHRHP01286 108 aa4.2□□□□□ -1.74
PDLIM5-215ENST00000511586 LINC00483Q53H64 154 aa4.2□□□□□ -1.74
PDLIM5-215ENST00000511586 GAGE2AQ6NT46 116 aa4.2□□□□□ -1.74
PDLIM5-215ENST00000511586 DHRS4-AS1Q9P1J3 65 aa4.2□□□□□ -1.74
PDLIM5-215ENST00000511586 H3BQ85 93 aa4.19□□□□□ -1.74
PDLIM5-215ENST00000511586 LCE2CQ5TA81 110 aa4.19□□□□□ -1.74
PDLIM5-215ENST00000511586 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.19□□□□□ -1.74
PDLIM5-215ENST00000511586 Q6ZQY7 126 aa4.19□□□□□ -1.74
PDLIM5-215ENST00000511586 C3orf22Q8N5N4 141 aa4.19□□□□□ -1.74
PDLIM5-215ENST00000511586 TMEM256-PLSCR3K7ERE1 68 aa4.18□□□□□ -1.74
PDLIM5-215ENST00000511586 A0A1B0GV72 72 aa4.17□□□□□ -1.74
PDLIM5-215ENST00000511586 SPAG11AQ6PDA7 123 aa4.17□□□□□ -1.74
PDLIM5-215ENST00000511586 LINC00304Q8N9R0 145 aa4.17□□□□□ -1.74
PDLIM5-215ENST00000511586 ST20-AS1Q8NBB2 130 aa4.17□□□□□ -1.74
PDLIM5-215ENST00000511586 IGLV9-49A0A0B4J1Y8 123 aa4.16□□□□□ -1.74
PDLIM5-215ENST00000511586 JMJD7-PLA2G4BH0Y9G9 81 aa4.16□□□□□ -1.74
PDLIM5-215ENST00000511586 C4orf48Q5BLP8 95 aa4.16□□□□□ -1.74
PDLIM5-215ENST00000511586 SSBP3-AS1Q7Z2R9 100 aa4.16□□□□□ -1.74
PDLIM5-215ENST00000511586 LAMTOR3Q9UHA4 124 aa4.16□□□□□ -1.74
PDLIM5-215ENST00000511586 FAM240AA0A1B0GVK7 77 aa4.15□□□□□ -1.75
PDLIM5-215ENST00000511586 SPRR1BP22528 89 aa4.15□□□□□ -1.75
PDLIM5-215ENST00000511586 MOBPQ13875 183 aa4.15□□□□□ -1.75
PDLIM5-215ENST00000511586 Q8NBF4 154 aa4.15□□□□□ -1.75
PDLIM5-215ENST00000511586 C14orf132Q9NPU4 83 aa4.15□□□□□ -1.75
PDLIM5-215ENST00000511586 HMCN2Q8NDA2 5059 aa4.15□□□□□ -1.75
PDLIM5-215ENST00000511586 PRR4Q16378 134 aa4.14□□□□□ -1.75
PDLIM5-215ENST00000511586 DEFB105AQ8NG35 78 aa4.14□□□□□ -1.75
PDLIM5-215ENST00000511586 ACYP1P07311 99 aa4.13□□□□□ -1.75
PDLIM5-215ENST00000511586 C9orf153Q5TBE3 101 aa4.13□□□□□ -1.75
PDLIM5-215ENST00000511586 OBSCN-AS1Q96MR7 158 aa4.13□□□□□ -1.75
PDLIM5-215ENST00000511586 SPINK1P00995 79 aa4.12□□□□□ -1.75
PDLIM5-215ENST00000511586 NDUFV3P56181 108 aaKnown RBP4.12□□□□□ -1.75
PDLIM5-215ENST00000511586 RBM3P98179 157 aaKnown RBP4.12□□□□□ -1.75
PDLIM5-215ENST00000511586 DSCR8Q96T75 97 aa4.12□□□□□ -1.75
PDLIM5-215ENST00000511586 IGLV5-48A0A075B6I7 105 aa4.11□□□□□ -1.75
PDLIM5-215ENST00000511586 F8WEM9 126 aa4.11□□□□□ -1.75
PDLIM5-215ENST00000511586 CDIP1Q9H305 208 aa4.11□□□□□ -1.75
PDLIM5-215ENST00000511586 LOC110117498A0A087WWA1 95 aa4.1□□□□□ -1.75
PDLIM5-215ENST00000511586 CCKP06307 115 aa4.1□□□□□ -1.75
PDLIM5-215ENST00000511586 PDE6GP18545 87 aa4.1□□□□□ -1.75
PDLIM5-215ENST00000511586 LINC01547P58512 204 aaPredicted RBP4.1□□□□□ -1.75
PDLIM5-215ENST00000511586 SMIM29Q86T20 159 aa4.1□□□□□ -1.75
PDLIM5-215ENST00000511586 Q8N377 158 aa4.1□□□□□ -1.75
PDLIM5-215ENST00000511586 SIGMAR1Q99720 223 aa4.1□□□□□ -1.75
PDLIM5-215ENST00000511586 RPS29P62273 56 aaKnown RBP4.09□□□□□ -1.75
PDLIM5-215ENST00000511586 Q6ZQT0 140 aa4.09□□□□□ -1.75
PDLIM5-215ENST00000511586 RETNLBQ9BQ08 111 aa4.09□□□□□ -1.75
PDLIM5-215ENST00000511586 C5orf47Q569G3 176 aa4.08□□□□□ -1.76
PDLIM5-215ENST00000511586 IGLV7-46A0A075B6I9 117 aa4.07□□□□□ -1.76
PDLIM5-215ENST00000511586 TRBV7-4A0A0J9YYF1 115 aa4.07□□□□□ -1.76
PDLIM5-215ENST00000511586 FP248Q71RG6 208 aaPredicted RBP4.07□□□□□ -1.76
PDLIM5-215ENST00000511586 MT-ATP8P03928 68 aa4.06□□□□□ -1.76
PDLIM5-215ENST00000511586 CD164Q04900 197 aa4.06□□□□□ -1.76
PDLIM5-215ENST00000511586 HRCT1Q6UXD1 115 aa4.06□□□□□ -1.76
PDLIM5-215ENST00000511586 LINC00643Q86TS7 51 aa4.06□□□□□ -1.76
PDLIM5-215ENST00000511586 UBL5Q9BZL1 73 aa4.06□□□□□ -1.76
PDLIM5-215ENST00000511586 LIMD2Q9BT23 127 aa4.05□□□□□ -1.76
PDLIM5-215ENST00000511586 LINC00846Q9NV44 126 aa4.05□□□□□ -1.76
PDLIM5-215ENST00000511586 LRP2P98164 4655 aa4.05□□□□□ -1.76
PDLIM5-215ENST00000511586 LORP23490 312 aaPredicted RBP4.04□□□□□ -1.76
PDLIM5-215ENST00000511586 SEC61GP60059 68 aa4.04□□□□□ -1.76
PDLIM5-215ENST00000511586 TPRXLQ17RH7 258 aa4.04□□□□□ -1.76
PDLIM5-215ENST00000511586 Q6JHZ5 121 aa4.04□□□□□ -1.76
PDLIM5-215ENST00000511586 LPAP08519 4548 aa4.04□□□□□ -1.76
PDLIM5-215ENST00000511586 IGLV8-61A0A075B6I0 122 aa4.03□□□□□ -1.76
PDLIM5-215ENST00000511586 A0A0G2JQZ4 141 aa4.03□□□□□ -1.76
PDLIM5-215ENST00000511586 SCGB1A1P11684 91 aa4.03□□□□□ -1.76
PDLIM5-215ENST00000511586 ATP5EP2Q5VTU8 51 aa4.03□□□□□ -1.76
PDLIM5-215ENST00000511586 UBR4Q5T4S7 5183 aa4.02□□□□□ -1.77
PDLIM5-215ENST00000511586 TRBV7-7A0A0K0K1E9 115 aa4.02□□□□□ -1.77
PDLIM5-215ENST00000511586 Q5XG85 94 aa4.02□□□□□ -1.77
PDLIM5-215ENST00000511586 IGKV3D-7A0A0C4DH55 119 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms