RNA–Protein interactions for RNA: ENST00000511105.1

PTPN13-208, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 645 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-208ENST00000511105 SMCR5Q8TEV8 140 aa2.66□□□□□ -1.98
PTPN13-208ENST00000511105 TTTY13Q9BZ97 58 aa2.66□□□□□ -1.98
PTPN13-208ENST00000511105 NDUFA12Q9UI09 145 aa2.66□□□□□ -1.98
PTPN13-208ENST00000511105 TRBV10-3A0A0K0K1G6 114 aa2.65□□□□□ -1.99
PTPN13-208ENST00000511105 LEPROTO15243 131 aa2.65□□□□□ -1.99
PTPN13-208ENST00000511105 ERC2-IT1O76042 136 aa2.65□□□□□ -1.99
PTPN13-208ENST00000511105 CRYGAP11844 174 aa2.65□□□□□ -1.99
PTPN13-208ENST00000511105 C1orf195Q5TG92 126 aa2.65□□□□□ -1.99
PTPN13-208ENST00000511105 KRTAP13-1Q8IUC0 172 aa2.65□□□□□ -1.99
PTPN13-208ENST00000511105 PLEKHB2Q96CS7 222 aa2.65□□□□□ -1.99
PTPN13-208ENST00000511105 TP73-AS1Q9UF72 201 aa2.65□□□□□ -1.99
PTPN13-208ENST00000511105 IGKV2D-26A0A0A0MRZ7 120 aa2.64□□□□□ -1.99
PTPN13-208ENST00000511105 MYMXA0A1B0GTQ4 84 aa2.64□□□□□ -1.99
PTPN13-208ENST00000511105 J3QQQ9 107 aa2.64□□□□□ -1.99
PTPN13-208ENST00000511105 HIST1H2BKO60814 126 aa2.64□□□□□ -1.99
PTPN13-208ENST00000511105 DPM2O94777 84 aa2.64□□□□□ -1.99
PTPN13-208ENST00000511105 IGKCP01834 107 aa2.64□□□□□ -1.99
PTPN13-208ENST00000511105 HIST1H2BJP06899 126 aa2.64□□□□□ -1.99
PTPN13-208ENST00000511105 LGALS3P17931 250 aaKnown RBP2.64□□□□□ -1.99
PTPN13-208ENST00000511105 HIST1H2BOP23527 126 aa2.64□□□□□ -1.99
PTPN13-208ENST00000511105 HIST1H2BBP33778 126 aa2.64□□□□□ -1.99
PTPN13-208ENST00000511105 HIST1H2BDP58876 126 aa2.64□□□□□ -1.99
PTPN13-208ENST00000511105 HIST1H2BCP62807 126 aa2.64□□□□□ -1.99
PTPN13-208ENST00000511105 HIST2H2BEQ16778 126 aa2.64□□□□□ -1.99
PTPN13-208ENST00000511105 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.64□□□□□ -1.99
PTPN13-208ENST00000511105 LCE3AQ5TA76 89 aa2.64□□□□□ -1.99
PTPN13-208ENST00000511105 ATOH7Q8N100 152 aa2.64□□□□□ -1.99
PTPN13-208ENST00000511105 HIST1H2BHQ93079 126 aa2.64□□□□□ -1.99
PTPN13-208ENST00000511105 HIST1H2BNQ99877 126 aa2.64□□□□□ -1.99
PTPN13-208ENST00000511105 HIST1H2BMQ99879 126 aa2.64□□□□□ -1.99
PTPN13-208ENST00000511105 ETDCA0A1B0GVM5 59 aa2.63□□□□□ -1.99
PTPN13-208ENST00000511105 K7ERS5 55 aa2.63□□□□□ -1.99
PTPN13-208ENST00000511105 KRTDAPP60985 99 aa2.63□□□□□ -1.99
PTPN13-208ENST00000511105 COX17Q14061 63 aa2.63□□□□□ -1.99
PTPN13-208ENST00000511105 JOSD1Q15040 202 aaPredicted RBP2.63□□□□□ -1.99
PTPN13-208ENST00000511105 SOSTDC1Q6X4U4 206 aa2.63□□□□□ -1.99
PTPN13-208ENST00000511105 A8MUU9 505 aa2.62□□□□□ -1.99
PTPN13-208ENST00000511105 SYS1-DBNDD2H3BUS1 97 aa2.62□□□□□ -1.99
PTPN13-208ENST00000511105 LINC00313P59037 77 aa2.62□□□□□ -1.99
PTPN13-208ENST00000511105 HRCT1Q6UXD1 115 aa2.62□□□□□ -1.99
PTPN13-208ENST00000511105 LINC00304Q8N9R0 145 aa2.62□□□□□ -1.99
PTPN13-208ENST00000511105 OR13C6PQ8NH95 151 aa2.62□□□□□ -1.99
PTPN13-208ENST00000511105 SPRR4Q96PI1 79 aa2.62□□□□□ -1.99
PTPN13-208ENST00000511105 HSPB8Q9UJY1 196 aa2.62□□□□□ -1.99
PTPN13-208ENST00000511105 C3orf79P0CE67 100 aa2.61□□□□□ -1.99
PTPN13-208ENST00000511105 S100A7L2Q5SY68 101 aa2.61□□□□□ -1.99
PTPN13-208ENST00000511105 DEFB105AQ8NG35 78 aa2.61□□□□□ -1.99
PTPN13-208ENST00000511105 MUC17Q685J3 4493 aa2.61□□□□□ -1.99
PTPN13-208ENST00000511105 MUC2Q02817 5179 aa2.6□□□□□ -1.99
PTPN13-208ENST00000511105 FAT4Q6V0I7 4981 aa2.6□□□□□ -1.99
PTPN13-208ENST00000511105 A0A0G2JQZ4 141 aa2.6□□□□□ -1.99
PTPN13-208ENST00000511105 ZNF815PA8K554 130 aa2.6□□□□□ -1.99
PTPN13-208ENST00000511105 PLNP26678 52 aa2.6□□□□□ -1.99
PTPN13-208ENST00000511105 S100A2P29034 98 aa2.6□□□□□ -1.99
PTPN13-208ENST00000511105 BATFQ16520 125 aa2.6□□□□□ -1.99
PTPN13-208ENST00000511105 SLC25A34Q6PIV7 304 aa2.6□□□□□ -1.99
PTPN13-208ENST00000511105 ADM2Q7Z4H4 148 aa2.6□□□□□ -1.99
PTPN13-208ENST00000511105 LINC00308Q8TCZ7 52 aa2.6□□□□□ -1.99
PTPN13-208ENST00000511105 Q9BRP9 147 aa2.6□□□□□ -1.99
PTPN13-208ENST00000511105 KCNQ1DNQ9H478 68 aa2.6□□□□□ -1.99
PTPN13-208ENST00000511105 TRAV23DV6A0A075B6W5 121 aa2.59□□□□□ -1.99
PTPN13-208ENST00000511105 A8MWP4 228 aa2.59□□□□□ -1.99
PTPN13-208ENST00000511105 MOBPQ13875 183 aa2.59□□□□□ -1.99
PTPN13-208ENST00000511105 MUSTN1Q8IVN3 82 aa2.59□□□□□ -1.99
PTPN13-208ENST00000511105 MIEN1Q9BRT3 115 aa2.59□□□□□ -1.99
PTPN13-208ENST00000511105 LINC00587B1AMM8 73 aa2.58□□□□□ -2
PTPN13-208ENST00000511105 H7C2G1 150 aa2.58□□□□□ -2
PTPN13-208ENST00000511105 SPRR1AP35321 89 aa2.58□□□□□ -2
PTPN13-208ENST00000511105 FAM229BQ4G0N7 80 aa2.58□□□□□ -2
PTPN13-208ENST00000511105 C9orf153Q5TBE3 101 aa2.58□□□□□ -2
PTPN13-208ENST00000511105 LINC01545Q5VT33 79 aa2.58□□□□□ -2
PTPN13-208ENST00000511105 SPINT4Q6UDR6 99 aa2.58□□□□□ -2
PTPN13-208ENST00000511105 SFTA2Q6UW10 78 aa2.58□□□□□ -2
PTPN13-208ENST00000511105 ZNF73O43830 326 aaPredicted RBP2.57□□□□□ -2
PTPN13-208ENST00000511105 IGLV6-57P01721 117 aa2.57□□□□□ -2
PTPN13-208ENST00000511105 PMAIP1Q13794 54 aa2.57□□□□□ -2
PTPN13-208ENST00000511105 LOC107984156A0A0G2JMH3 177 aa2.56□□□□□ -2
PTPN13-208ENST00000511105 COX7BP24311 80 aa2.56□□□□□ -2
PTPN13-208ENST00000511105 S100A12P80511 92 aa2.56□□□□□ -2
PTPN13-208ENST00000511105 ARL17AQ8IVW1 177 aa2.56□□□□□ -2
PTPN13-208ENST00000511105 TRBV10-2A0A0K0K1G8 114 aa2.55□□□□□ -2
PTPN13-208ENST00000511105 C9orf92A6NGG3 77 aa2.55□□□□□ -2
PTPN13-208ENST00000511105 H3BQ85 93 aa2.55□□□□□ -2
PTPN13-208ENST00000511105 NDUFC2O95298 119 aa2.55□□□□□ -2
PTPN13-208ENST00000511105 Q6ZRX8 168 aa2.55□□□□□ -2
PTPN13-208ENST00000511105 C12orf57Q99622 126 aa2.55□□□□□ -2
PTPN13-208ENST00000511105 KRTAP4-1Q9BYQ7 146 aa2.55□□□□□ -2
PTPN13-208ENST00000511105 A6NED7 52 aa2.54□□□□□ -2
PTPN13-208ENST00000511105 HINT1P49773 126 aaPredicted RBP2.54□□□□□ -2
PTPN13-208ENST00000511105 KRTAP13-3Q3SY46 172 aa2.54□□□□□ -2
PTPN13-208ENST00000511105 SSBP3-AS1Q7Z2R9 100 aa2.54□□□□□ -2
PTPN13-208ENST00000511105 HIST3H2BBQ8N257 126 aa2.54□□□□□ -2
PTPN13-208ENST00000511105 HIST1H2BLQ99880 126 aa2.54□□□□□ -2
PTPN13-208ENST00000511105 SPANXCQ9NY87 97 aa2.54□□□□□ -2
PTPN13-208ENST00000511105 C20orf202A1L168 122 aa2.53□□□□□ -2
PTPN13-208ENST00000511105 TIMM17BO60830 172 aa2.53□□□□□ -2
PTPN13-208ENST00000511105 SPAG11AQ6PDA7 123 aa2.53□□□□□ -2
PTPN13-208ENST00000511105 SPINK1P00995 79 aa2.52□□□□□ -2.01
PTPN13-208ENST00000511105 SMIM11BQ8TCY0 68 aa2.52□□□□□ -2.01
PTPN13-208ENST00000511105 C14orf144Q96I85 54 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms