RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 SMCR5Q8TEV8 140 aa8.17□□□□□ -1.1
LIN54-210ENST00000510877 C10orf25Q5T742 122 aa8.17□□□□□ -1.1
LIN54-210ENST00000510877 ATP11AUNQ6ZP68 121 aa8.17□□□□□ -1.1
LIN54-210ENST00000510877 LOC110117498A0A087WWA1 95 aa8.16□□□□□ -1.1
LIN54-210ENST00000510877 SPAG11AQ6PDA7 123 aa8.16□□□□□ -1.1
LIN54-210ENST00000510877 KRTAP10-1P60331 282 aa8.16□□□□□ -1.1
LIN54-210ENST00000510877 IGHV3OR16-9A0A0B4J2B5 98 aa8.15□□□□□ -1.1
LIN54-210ENST00000510877 LCA10Q71F78 164 aa8.15□□□□□ -1.1
LIN54-210ENST00000510877 H7BZZ5 65 aa8.14□□□□□ -1.11
LIN54-210ENST00000510877 PRR15Q8IV56 129 aa8.13□□□□□ -1.11
LIN54-210ENST00000510877 CNBPP62633 177 aaKnown RBP8.13□□□□□ -1.11
LIN54-210ENST00000510877 PRLHP81277 87 aa8.13□□□□□ -1.11
LIN54-210ENST00000510877 FAM218AQ96MZ4 157 aa8.13□□□□□ -1.11
LIN54-210ENST00000510877 C6orf48Q9UBA6 75 aa8.13□□□□□ -1.11
LIN54-210ENST00000510877 SPINK6Q6UWN8 80 aa8.12□□□□□ -1.11
LIN54-210ENST00000510877 C7orf65Q6ZTY9 151 aa8.12□□□□□ -1.11
LIN54-210ENST00000510877 LINC01600Q96MT4 127 aa8.12□□□□□ -1.11
LIN54-210ENST00000510877 IGLV5-45A0A087WSX0 123 aa8.12□□□□□ -1.11
LIN54-210ENST00000510877 Q6ZQT0 140 aa8.12□□□□□ -1.11
LIN54-210ENST00000510877 SMIM29Q86T20 159 aa8.11□□□□□ -1.11
LIN54-210ENST00000510877 Q8N1X5 172 aa8.1□□□□□ -1.11
LIN54-210ENST00000510877 C1orf64Q8NEQ6 169 aa8.1□□□□□ -1.11
LIN54-210ENST00000510877 A8MUN3 132 aa8.1□□□□□ -1.11
LIN54-210ENST00000510877 LINC00167Q96N53 147 aa8.1□□□□□ -1.11
LIN54-210ENST00000510877 RETNLBQ9BQ08 111 aa8.1□□□□□ -1.11
LIN54-210ENST00000510877 C15orf56Q8N910 161 aa8.08□□□□□ -1.12
LIN54-210ENST00000510877 ELOF1P60002 83 aaKnown RBP8.08□□□□□ -1.12
LIN54-210ENST00000510877 PRR3P79522 188 aaKnown RBP8.06□□□□□ -1.12
LIN54-210ENST00000510877 PCOTHQ58A44 107 aa8.06□□□□□ -1.12
LIN54-210ENST00000510877 LITAFQ99732 161 aa8.06□□□□□ -1.12
LIN54-210ENST00000510877 PLA2G2DQ9UNK4 145 aa8.06□□□□□ -1.12
LIN54-210ENST00000510877 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.04□□□□□ -1.12
LIN54-210ENST00000510877 TP53AIP1Q9HCN2 124 aa8.04□□□□□ -1.12
LIN54-210ENST00000510877 SPACA4Q8TDM5 124 aa8.04□□□□□ -1.12
LIN54-210ENST00000510877 PSORS1C2Q9UIG4 136 aa8.04□□□□□ -1.12
LIN54-210ENST00000510877 A0A1B0GU69 56 aa8.03□□□□□ -1.12
LIN54-210ENST00000510877 IGLV7-43P04211 117 aa8.03□□□□□ -1.12
LIN54-210ENST00000510877 TRAV22A0A0B4J277 110 aa8.02□□□□□ -1.12
LIN54-210ENST00000510877 LOC101927531A0A1B0GV80 90 aa8.02□□□□□ -1.12
LIN54-210ENST00000510877 ZNF861PO60384 105 aa8.02□□□□□ -1.13
LIN54-210ENST00000510877 LINC00304Q8N9R0 145 aa8□□□□□ -1.13
LIN54-210ENST00000510877 Q5XG85 94 aa7.99□□□□□ -1.13
LIN54-210ENST00000510877 FAM168BA1KXE4 195 aa7.99□□□□□ -1.13
LIN54-210ENST00000510877 A0A087WSZ3 146 aa7.99□□□□□ -1.13
LIN54-210ENST00000510877 ACYP2P14621 99 aa7.98□□□□□ -1.13
LIN54-210ENST00000510877 MOBPQ13875 183 aa7.97□□□□□ -1.13
LIN54-210ENST00000510877 A0A1W2PNN7 141 aa7.96□□□□□ -1.14
LIN54-210ENST00000510877 Q1T7F1 81 aa7.95□□□□□ -1.14
LIN54-210ENST00000510877 SPENQ96T58 3664 aaKnown RBP7.95□□□□□ -1.14
LIN54-210ENST00000510877 IGLV1-50A0A075B6I6 118 aa7.95□□□□□ -1.14
LIN54-210ENST00000510877 Q9BRP9 147 aa7.95□□□□□ -1.14
LIN54-210ENST00000510877 PLAC8Q9NZF1 115 aa7.94□□□□□ -1.14
LIN54-210ENST00000510877 Q8NBF4 154 aa7.94□□□□□ -1.14
LIN54-210ENST00000510877 RBM12B-AS1Q9P1G2 102 aa7.94□□□□□ -1.14
LIN54-210ENST00000510877 OXTP01178 125 aa7.93□□□□□ -1.14
LIN54-210ENST00000510877 PRR26Q8N8Z3 221 aa7.93□□□□□ -1.14
LIN54-210ENST00000510877 CDC42SE1Q9NRR8 79 aa7.92□□□□□ -1.14
LIN54-210ENST00000510877 COX6B2Q6YFQ2 88 aa7.91□□□□□ -1.14
LIN54-210ENST00000510877 COA5Q86WW8 74 aa7.91□□□□□ -1.14
LIN54-210ENST00000510877 TLX1NBP0CAT3 122 aa7.9□□□□□ -1.14
LIN54-210ENST00000510877 KIAA0087Q14695 138 aa7.9□□□□□ -1.14
LIN54-210ENST00000510877 Q6ZRN7 208 aaPredicted RBP7.9□□□□□ -1.14
LIN54-210ENST00000510877 DEFB116Q30KQ4 102 aa7.89□□□□□ -1.15
LIN54-210ENST00000510877 BSNQ9UPA5 3926 aa7.88□□□□□ -1.15
LIN54-210ENST00000510877 IGHV6-1A0A0B4J1U7 121 aa7.88□□□□□ -1.15
LIN54-210ENST00000510877 H3BS24 57 aa7.88□□□□□ -1.15
LIN54-210ENST00000510877 UQCR11O14957 56 aa7.88□□□□□ -1.15
LIN54-210ENST00000510877 SPANXA2-OT1Q8N9U9 137 aa7.87□□□□□ -1.15
LIN54-210ENST00000510877 OBSCN-AS1Q96MR7 158 aa7.84□□□□□ -1.15
LIN54-210ENST00000510877 TRBV7-4A0A0J9YYF1 115 aa7.84□□□□□ -1.15
LIN54-210ENST00000510877 IGLV7-46A0A075B6I9 117 aa7.84□□□□□ -1.16
LIN54-210ENST00000510877 C9orf129Q5T035 196 aaKnown RBP7.83□□□□□ -1.16
LIN54-210ENST00000510877 ANAPC11Q9NYG5 84 aa7.83□□□□□ -1.16
LIN54-210ENST00000510877 SRRM2Q9UQ35 2752 aaKnown RBP7.83□□□□□ -1.16
LIN54-210ENST00000510877 ANK3Q12955 4377 aaKnown RBP7.83□□□□□ -1.16
LIN54-210ENST00000510877 FP248Q71RG6 208 aaPredicted RBP7.83□□□□□ -1.16
LIN54-210ENST00000510877 SPINT4Q6UDR6 99 aa7.82□□□□□ -1.16
LIN54-210ENST00000510877 SSBP3-AS1Q7Z2R9 100 aa7.82□□□□□ -1.16
LIN54-210ENST00000510877 EIF4EBP3O60516 100 aaPredicted RBP7.8□□□□□ -1.16
LIN54-210ENST00000510877 LINC01554Q52M75 96 aa7.79□□□□□ -1.16
LIN54-210ENST00000510877 IGLV6-57P01721 117 aa7.79□□□□□ -1.16
LIN54-210ENST00000510877 MIR22HGQ0VDD5 57 aa7.78□□□□□ -1.16
LIN54-210ENST00000510877 Q6ZRX8 168 aa7.78□□□□□ -1.16
LIN54-210ENST00000510877 MEGF8Q7Z7M0 2845 aa7.78□□□□□ -1.16
LIN54-210ENST00000510877 SPINK1P00995 79 aa7.76□□□□□ -1.17
LIN54-210ENST00000510877 K7EQZ3 153 aa7.75□□□□□ -1.17
LIN54-210ENST00000510877 A8MWP4 228 aa7.75□□□□□ -1.17
LIN54-210ENST00000510877 DNHD1Q96M86 4753 aa7.75□□□□□ -1.17
LIN54-210ENST00000510877 Q75L30 129 aa7.75□□□□□ -1.17
LIN54-210ENST00000510877 OCR1Q9BZK8 76 aa7.75□□□□□ -1.17
LIN54-210ENST00000510877 A0A1B0GVY2 172 aa7.71□□□□□ -1.18
LIN54-210ENST00000510877 COL7A1Q02388 2944 aa7.7□□□□□ -1.18
LIN54-210ENST00000510877 CYSTM1Q9H1C7 97 aa7.7□□□□□ -1.18
LIN54-210ENST00000510877 PANO1I0J062 215 aa7.7□□□□□ -1.18
LIN54-210ENST00000510877 FAM229BQ4G0N7 80 aa7.7□□□□□ -1.18
LIN54-210ENST00000510877 KCNQ1DNQ9H478 68 aa7.7□□□□□ -1.18
LIN54-210ENST00000510877 SPRR4Q96PI1 79 aa7.7□□□□□ -1.18
LIN54-210ENST00000510877 TRRAPQ9Y4A5 3859 aa7.69□□□□□ -1.18
LIN54-210ENST00000510877 KRTAP26-1Q6PEX3 210 aa7.69□□□□□ -1.18
LIN54-210ENST00000510877 ST20-AS1Q8NBB2 130 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms