RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 CST9LQ9H4G1 147 aa2.62□□□□□ -1.99
USP53-206ENST00000510737 BATF3Q9NR55 127 aa2.62□□□□□ -1.99
USP53-206ENST00000510737 DDTP30046 118 aa2.61□□□□□ -1.99
USP53-206ENST00000510737 S100A12P80511 92 aa2.61□□□□□ -1.99
USP53-206ENST00000510737 JOSD1Q15040 202 aaPredicted RBP2.61□□□□□ -1.99
USP53-206ENST00000510737 ORMDL2Q53FV1 153 aa2.61□□□□□ -1.99
USP53-206ENST00000510737 A0A1B0GW15 77 aa2.6□□□□□ -1.99
USP53-206ENST00000510737 SMIM27A0A1W2PRY6 76 aa2.6□□□□□ -1.99
USP53-206ENST00000510737 H3BRM9 83 aa2.6□□□□□ -1.99
USP53-206ENST00000510737 TEX46H3BTG2 121 aa2.6□□□□□ -1.99
USP53-206ENST00000510737 TCL1BO95988 128 aa2.6□□□□□ -1.99
USP53-206ENST00000510737 SMIM13P0DJ93 91 aa2.6□□□□□ -1.99
USP53-206ENST00000510737 TOMM6Q96B49 74 aa2.6□□□□□ -1.99
USP53-206ENST00000510737 A0A1B0GWB2 263 aa2.59□□□□□ -1.99
USP53-206ENST00000510737 A0A1B0GXF2 115 aa2.59□□□□□ -1.99
USP53-206ENST00000510737 F8W036 122 aa2.59□□□□□ -1.99
USP53-206ENST00000510737 SMLR1H3BR10 107 aa2.59□□□□□ -1.99
USP53-206ENST00000510737 MRPL54Q6P161 138 aaKnown RBP2.59□□□□□ -1.99
USP53-206ENST00000510737 SCGB3A1Q96QR1 104 aa2.59□□□□□ -1.99
USP53-206ENST00000510737 MAP1LC3AQ9H492 121 aa2.59□□□□□ -1.99
USP53-206ENST00000510737 TMEM250H0YL14 139 aa2.58□□□□□ -2
USP53-206ENST00000510737 ZNF22P17026 224 aaPredicted RBP2.58□□□□□ -2
USP53-206ENST00000510737 CEBPGP53567 150 aa2.58□□□□□ -2
USP53-206ENST00000510737 Q5VV11 94 aa2.58□□□□□ -2
USP53-206ENST00000510737 MIR7-3HGQ8N6C7 128 aa2.58□□□□□ -2
USP53-206ENST00000510737 DEFB105AQ8NG35 78 aa2.58□□□□□ -2
USP53-206ENST00000510737 K7EMI3 77 aa2.57□□□□□ -2
USP53-206ENST00000510737 IGLC3P0DOY3 106 aa2.57□□□□□ -2
USP53-206ENST00000510737 ZNF345Q14585 488 aa2.57□□□□□ -2
USP53-206ENST00000510737 KRTAP19-8Q3LI54 63 aa2.57□□□□□ -2
USP53-206ENST00000510737 S100ZQ8WXG8 99 aa2.57□□□□□ -2
USP53-206ENST00000510737 TRBV10-2A0A0K0K1G8 114 aa2.56□□□□□ -2
USP53-206ENST00000510737 PCP4L1A6NKN8 68 aa2.56□□□□□ -2
USP53-206ENST00000510737 ZNF73O43830 326 aaPredicted RBP2.56□□□□□ -2
USP53-206ENST00000510737 SNAPINO95295 136 aa2.56□□□□□ -2
USP53-206ENST00000510737 TAL2Q16559 108 aa2.56□□□□□ -2
USP53-206ENST00000510737 LINC00299Q6ZSB3 139 aa2.56□□□□□ -2
USP53-206ENST00000510737 SMIM7Q9BQ49 75 aa2.56□□□□□ -2
USP53-206ENST00000510737 LAMTOR2Q9Y2Q5 125 aa2.56□□□□□ -2
USP53-206ENST00000510737 TRAV23DV6A0A075B6W5 121 aa2.55□□□□□ -2
USP53-206ENST00000510737 KANTRA0A1W2PQU2 76 aa2.55□□□□□ -2
USP53-206ENST00000510737 S100A8P05109 93 aa2.55□□□□□ -2
USP53-206ENST00000510737 G0S2P27469 103 aa2.55□□□□□ -2
USP53-206ENST00000510737 SFTA2Q6UW10 78 aa2.55□□□□□ -2
USP53-206ENST00000510737 KRTAP8-1Q8IUC2 63 aa2.55□□□□□ -2
USP53-206ENST00000510737 TEX49A0A1B0GTD5 131 aa2.54□□□□□ -2
USP53-206ENST00000510737 HIST1H4GQ99525 98 aa2.54□□□□□ -2
USP53-206ENST00000510737 NXT2Q9NPJ8 142 aaKnown RBP2.54□□□□□ -2
USP53-206ENST00000510737 NDUFA6P56556 154 aa2.53□□□□□ -2
USP53-206ENST00000510737 MEIG1Q5JSS6 88 aa2.53□□□□□ -2
USP53-206ENST00000510737 S100A7L2Q5SY68 101 aa2.53□□□□□ -2
USP53-206ENST00000510737 C11orf86A6NJI1 115 aa2.51□□□□□ -2.01
USP53-206ENST00000510737 SRP19P09132 144 aaKnown RBP2.51□□□□□ -2.01
USP53-206ENST00000510737 HINT1P49773 126 aaPredicted RBP2.51□□□□□ -2.01
USP53-206ENST00000510737 TMEM170BQ5T4T1 132 aa2.51□□□□□ -2.01
USP53-206ENST00000510737 FA2HQ7L5A8 372 aa2.51□□□□□ -2.01
USP53-206ENST00000510737 SPRR2GQ9BYE4 73 aa2.51□□□□□ -2.01
USP53-206ENST00000510737 SPANXB1Q9NS25 103 aaPredicted RBP2.51□□□□□ -2.01
USP53-206ENST00000510737 IGLV5-48A0A075B6I7 105 aa2.5□□□□□ -2.01
USP53-206ENST00000510737 TRBV7-7A0A0K0K1E9 115 aa2.5□□□□□ -2.01
USP53-206ENST00000510737 ADIRFQ15847 76 aa2.5□□□□□ -2.01
USP53-206ENST00000510737 ATP5L2Q7Z4Y8 100 aa2.5□□□□□ -2.01
USP53-206ENST00000510737 A0A1W2PNM2 257 aa2.49□□□□□ -2.01
USP53-206ENST00000510737 LINC01546A6NGU7 62 aa2.49□□□□□ -2.01
USP53-206ENST00000510737 NDUFC2O95298 119 aa2.49□□□□□ -2.01
USP53-206ENST00000510737 TMEM223A0PJW6 202 aa2.48□□□□□ -2.01
USP53-206ENST00000510737 LINC00587B1AMM8 73 aa2.48□□□□□ -2.01
USP53-206ENST00000510737 SOSTDC1Q6X4U4 206 aa2.48□□□□□ -2.01
USP53-206ENST00000510737 LINC01549A6NIU2 74 aa2.47□□□□□ -2.01
USP53-206ENST00000510737 LST1O00453 97 aa2.47□□□□□ -2.01
USP53-206ENST00000510737 SPINK7P58062 85 aa2.47□□□□□ -2.01
USP53-206ENST00000510737 ELOF1P60002 83 aaKnown RBP2.47□□□□□ -2.01
USP53-206ENST00000510737 MAP1LC3CQ9BXW4 147 aa2.47□□□□□ -2.01
USP53-206ENST00000510737 IMUPQ9GZP8 106 aa2.47□□□□□ -2.01
USP53-206ENST00000510737 C9JQL5 133 aa2.46□□□□□ -2.02
USP53-206ENST00000510737 COX7BP24311 80 aa2.46□□□□□ -2.02
USP53-206ENST00000510737 BAGE3Q86Y29 109 aa2.46□□□□□ -2.02
USP53-206ENST00000510737 NAT8Q9UHE5 227 aa2.46□□□□□ -2.02
USP53-206ENST00000510737 AHNAKQ09666 5890 aaKnown RBP2.44□□□□□ -2.02
USP53-206ENST00000510737 MYMXA0A1B0GTQ4 84 aa2.44□□□□□ -2.02
USP53-206ENST00000510737 HBDP02042 147 aa2.44□□□□□ -2.02
USP53-206ENST00000510737 OR13C6PQ8NH95 151 aa2.44□□□□□ -2.02
USP53-206ENST00000510737 LINC00313P59037 77 aa2.43□□□□□ -2.02
USP53-206ENST00000510737 SEC61GP60059 68 aa2.43□□□□□ -2.02
USP53-206ENST00000510737 NPC2P61916 151 aa2.43□□□□□ -2.02
USP53-206ENST00000510737 RHEBQ15382 184 aa2.43□□□□□ -2.02
USP53-206ENST00000510737 MIEN1Q9BRT3 115 aa2.43□□□□□ -2.02
USP53-206ENST00000510737 CBY1Q9Y3M2 126 aa2.43□□□□□ -2.02
USP53-206ENST00000510737 MT4P47944 62 aa2.42□□□□□ -2.02
USP53-206ENST00000510737 TSPEAR-AS2P59090 65 aa2.42□□□□□ -2.02
USP53-206ENST00000510737 SLC51BQ86UW2 128 aa2.42□□□□□ -2.02
USP53-206ENST00000510737 WFDC13Q8IUB5 93 aa2.42□□□□□ -2.02
USP53-206ENST00000510737 CLEC2BQ92478 149 aa2.42□□□□□ -2.02
USP53-206ENST00000510737 H1FX-AS1Q4G0G2 97 aa2.41□□□□□ -2.02
USP53-206ENST00000510737 COA6Q5JTJ3 125 aaKnown RBP2.41□□□□□ -2.02
USP53-206ENST00000510737 Q6JHZ5 121 aa2.41□□□□□ -2.02
USP53-206ENST00000510737 UQCC3Q6UW78 93 aa2.41□□□□□ -2.02
USP53-206ENST00000510737 CAMK2N1Q7Z7J9 78 aa2.41□□□□□ -2.02
USP53-206ENST00000510737 COMMD7Q86VX2 200 aa2.41□□□□□ -2.02
USP53-206ENST00000510737 FAM236AA0A1B0GUQ0 79 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms