RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 KRTAP10-10P60014 251 aa5.27□□□□□ -1.57
MBD4-208ENST00000509828 SYNE2Q8WXH0 6885 aaKnown RBP5.27□□□□□ -1.57
MBD4-208ENST00000509828 MT2AP02795 61 aa5.26□□□□□ -1.57
MBD4-208ENST00000509828 LINC00310P59036 64 aa5.26□□□□□ -1.57
MBD4-208ENST00000509828 CLEC2BQ92478 149 aa5.26□□□□□ -1.57
MBD4-208ENST00000509828 YPEL4Q96NS1 127 aa5.26□□□□□ -1.57
MBD4-208ENST00000509828 TRAV13-2A0A0B4J235 113 aa5.25□□□□□ -1.57
MBD4-208ENST00000509828 IGFL1Q6UW32 110 aa5.25□□□□□ -1.57
MBD4-208ENST00000509828 TTTY13Q9BZ97 58 aa5.25□□□□□ -1.57
MBD4-208ENST00000509828 SYS1-DBNDD2H3BUS1 97 aa5.24□□□□□ -1.57
MBD4-208ENST00000509828 IFITM1P13164 125 aa5.24□□□□□ -1.57
MBD4-208ENST00000509828 OCIAD2Q56VL3 154 aa5.24□□□□□ -1.57
MBD4-208ENST00000509828 SMIM11BQ8TCY0 68 aa5.23□□□□□ -1.57
MBD4-208ENST00000509828 Q6ZQY7 126 aa5.22□□□□□ -1.57
MBD4-208ENST00000509828 MUSTN1Q8IVN3 82 aa5.22□□□□□ -1.57
MBD4-208ENST00000509828 SNHG12Q9BXW3 62 aa5.22□□□□□ -1.57
MBD4-208ENST00000509828 RBM12B-AS1Q9P1G2 102 aa5.22□□□□□ -1.57
MBD4-208ENST00000509828 hADV29S1A0JD25 119 aa5.21□□□□□ -1.58
MBD4-208ENST00000509828 C20orf166-AS1Q96NR2 134 aa5.21□□□□□ -1.58
MBD4-208ENST00000509828 MT1FP04733 61 aa5.2□□□□□ -1.58
MBD4-208ENST00000509828 PET117Q6UWS5 81 aa5.2□□□□□ -1.58
MBD4-208ENST00000509828 LINC00575Q6W349 94 aa5.2□□□□□ -1.58
MBD4-208ENST00000509828 Q6ZVH6 145 aa5.2□□□□□ -1.58
MBD4-208ENST00000509828 SS18L2Q9UHA2 77 aa5.2□□□□□ -1.58
MBD4-208ENST00000509828 A8MUU9 505 aa5.19□□□□□ -1.58
MBD4-208ENST00000509828 LINC01545Q5VT33 79 aa5.19□□□□□ -1.58
MBD4-208ENST00000509828 SCGB1D1O95968 90 aa5.18□□□□□ -1.58
MBD4-208ENST00000509828 KRTAP9-3Q9BYQ3 159 aa5.18□□□□□ -1.58
MBD4-208ENST00000509828 H3BUT2 72 aa5.17□□□□□ -1.58
MBD4-208ENST00000509828 DSCR10P59022 87 aa5.16□□□□□ -1.58
MBD4-208ENST00000509828 KRTDAPP60985 99 aa5.15□□□□□ -1.59
MBD4-208ENST00000509828 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.15□□□□□ -1.59
MBD4-208ENST00000509828 ANKRD39Q53RE8 183 aa5.14□□□□□ -1.59
MBD4-208ENST00000509828 MTURNQ8N3F0 131 aa5.14□□□□□ -1.59
MBD4-208ENST00000509828 PPDPFLQ8WWR9 84 aa5.14□□□□□ -1.59
MBD4-208ENST00000509828 SIGMAR1Q99720 223 aa5.14□□□□□ -1.59
MBD4-208ENST00000509828 C3orf79P0CE67 100 aa5.13□□□□□ -1.59
MBD4-208ENST00000509828 C12orf57Q99622 126 aa5.13□□□□□ -1.59
MBD4-208ENST00000509828 SNCGO76070 127 aa5.12□□□□□ -1.59
MBD4-208ENST00000509828 TEN1Q86WV5 123 aa5.12□□□□□ -1.59
MBD4-208ENST00000509828 A0A087WSZ3 146 aa5.11□□□□□ -1.59
MBD4-208ENST00000509828 LINC00313P59037 77 aa5.11□□□□□ -1.59
MBD4-208ENST00000509828 COLCA2A8K830 154 aa5.1□□□□□ -1.59
MBD4-208ENST00000509828 KRTAP19-6Q3LI70 58 aa5.1□□□□□ -1.59
MBD4-208ENST00000509828 BVES-AS1Q5T3Y7 98 aa5.1□□□□□ -1.59
MBD4-208ENST00000509828 ATOH7Q8N100 152 aa5.1□□□□□ -1.59
MBD4-208ENST00000509828 KRTAP16-1A8MUX0 517 aa5.08□□□□□ -1.6
MBD4-208ENST00000509828 HIST1H2BKO60814 126 aa5.08□□□□□ -1.6
MBD4-208ENST00000509828 HIST1H2BJP06899 126 aa5.08□□□□□ -1.6
MBD4-208ENST00000509828 HRES1P13985 223 aa5.08□□□□□ -1.6
MBD4-208ENST00000509828 HIST1H2BOP23527 126 aa5.08□□□□□ -1.6
MBD4-208ENST00000509828 HIST1H2BBP33778 126 aa5.08□□□□□ -1.6
MBD4-208ENST00000509828 HIST1H2BDP58876 126 aa5.08□□□□□ -1.6
MBD4-208ENST00000509828 HIST1H2BCP62807 126 aa5.08□□□□□ -1.6
MBD4-208ENST00000509828 HIST2H2BEQ16778 126 aa5.08□□□□□ -1.6
MBD4-208ENST00000509828 KRTAP6-3Q3LI67 103 aa5.08□□□□□ -1.6
MBD4-208ENST00000509828 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.08□□□□□ -1.6
MBD4-208ENST00000509828 HIST1H2BHQ93079 126 aa5.08□□□□□ -1.6
MBD4-208ENST00000509828 HIST1H2BNQ99877 126 aa5.08□□□□□ -1.6
MBD4-208ENST00000509828 HIST1H2BMQ99879 126 aa5.08□□□□□ -1.6
MBD4-208ENST00000509828 GHRHP01286 108 aa5.06□□□□□ -1.6
MBD4-208ENST00000509828 IGKV4-1P06312 121 aa5.06□□□□□ -1.6
MBD4-208ENST00000509828 NDUFV3P56181 108 aaKnown RBP5.06□□□□□ -1.6
MBD4-208ENST00000509828 MPLKIPQ8TAP9 179 aa5.05□□□□□ -1.6
MBD4-208ENST00000509828 H3BMG7 143 aa5.04□□□□□ -1.6
MBD4-208ENST00000509828 NOTCH2NLQ7Z3S9 236 aa5.04□□□□□ -1.6
MBD4-208ENST00000509828 A8MWP4 228 aa5.03□□□□□ -1.6
MBD4-208ENST00000509828 FABP2P12104 132 aa5.03□□□□□ -1.6
MBD4-208ENST00000509828 SNRPEP62304 92 aaKnown RBP5.03□□□□□ -1.6
MBD4-208ENST00000509828 IGHV6-1A0A0B4J1U7 121 aa5.02□□□□□ -1.61
MBD4-208ENST00000509828 HSBP1L1C9JCN9 74 aa5.02□□□□□ -1.61
MBD4-208ENST00000509828 Q8N9P0 234 aaPredicted RBP5.01□□□□□ -1.61
MBD4-208ENST00000509828 HIST1H4GQ99525 98 aa5.01□□□□□ -1.61
MBD4-208ENST00000509828 H0YGX0 51 aa5□□□□□ -1.61
MBD4-208ENST00000509828 DEFB116Q30KQ4 102 aa5□□□□□ -1.61
MBD4-208ENST00000509828 RAB37Q96AX2 223 aa4.99□□□□□ -1.61
MBD4-208ENST00000509828 SPINK7P58062 85 aa4.98□□□□□ -1.61
MBD4-208ENST00000509828 ANKRD29Q8N6D5 301 aa4.98□□□□□ -1.61
MBD4-208ENST00000509828 NEBP20929 6669 aa4.98□□□□□ -1.61
MBD4-208ENST00000509828 A0A1W2PNM2 257 aa4.97□□□□□ -1.61
MBD4-208ENST00000509828 A0A1B0GV72 72 aa4.96□□□□□ -1.62
MBD4-208ENST00000509828 LYRM7Q5U5X0 104 aa4.96□□□□□ -1.62
MBD4-208ENST00000509828 ZCCHC13Q8WW36 166 aaKnown RBP4.95□□□□□ -1.62
MBD4-208ENST00000509828 TRBV7-4A0A0J9YYF1 115 aa4.94□□□□□ -1.62
MBD4-208ENST00000509828 C8orf87E5RJ46 101 aa4.94□□□□□ -1.62
MBD4-208ENST00000509828 COA6Q5JTJ3 125 aaKnown RBP4.94□□□□□ -1.62
MBD4-208ENST00000509828 TRACP01848 142 aa4.93□□□□□ -1.62
MBD4-208ENST00000509828 WFDC13Q8IUB5 93 aa4.93□□□□□ -1.62
MBD4-208ENST00000509828 FAM218AQ96MZ4 157 aa4.93□□□□□ -1.62
MBD4-208ENST00000509828 TMEM238LA0A1B0GVL6 79 aa4.91□□□□□ -1.62
MBD4-208ENST00000509828 A0A1B0GVX0 72 aa4.91□□□□□ -1.62
MBD4-208ENST00000509828 A0A1B0GX51 115 aa4.91□□□□□ -1.62
MBD4-208ENST00000509828 CCKP06307 115 aa4.91□□□□□ -1.62
MBD4-208ENST00000509828 LINC00472Q9H8W2 130 aa4.91□□□□□ -1.62
MBD4-208ENST00000509828 DNAL4O96015 105 aa4.9□□□□□ -1.63
MBD4-208ENST00000509828 S100A2P29034 98 aa4.9□□□□□ -1.63
MBD4-208ENST00000509828 KRTAP20-1Q3LI63 56 aa4.9□□□□□ -1.63
MBD4-208ENST00000509828 VPS25Q9BRG1 176 aa4.9□□□□□ -1.63
MBD4-208ENST00000509828 ORMDL1Q9P0S3 153 aa4.88□□□□□ -1.63
MBD4-208ENST00000509828 H3BQ85 93 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms