RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 SMIM29Q86T20 159 aa4.1□□□□□ -1.75
TOPBP1-207ENST00000509162 HSBP1L1C9JCN9 74 aa4.09□□□□□ -1.75
TOPBP1-207ENST00000509162 COX7BP24311 80 aa4.09□□□□□ -1.75
TOPBP1-207ENST00000509162 VAMP8Q9BV40 100 aa4.09□□□□□ -1.75
TOPBP1-207ENST00000509162 ZNF706Q9Y5V0 76 aaPredicted RBP4.09□□□□□ -1.75
TOPBP1-207ENST00000509162 IGLV5-48A0A075B6I7 105 aa4.08□□□□□ -1.76
TOPBP1-207ENST00000509162 A0A0G2JQZ4 141 aa4.08□□□□□ -1.76
TOPBP1-207ENST00000509162 FXYD2P54710 66 aa4.08□□□□□ -1.76
TOPBP1-207ENST00000509162 A6NDN8 102 aa4.07□□□□□ -1.76
TOPBP1-207ENST00000509162 CFC1BP0CG36 223 aa4.07□□□□□ -1.76
TOPBP1-207ENST00000509162 CFC1P0CG37 223 aa4.07□□□□□ -1.76
TOPBP1-207ENST00000509162 LINC00518Q8N0U6 118 aa4.07□□□□□ -1.76
TOPBP1-207ENST00000509162 HIGD1BQ9P298 99 aa4.07□□□□□ -1.76
TOPBP1-207ENST00000509162 TRBV7-6A0A0J9YX20 115 aa4.06□□□□□ -1.76
TOPBP1-207ENST00000509162 A0A1B0GWB2 263 aa4.06□□□□□ -1.76
TOPBP1-207ENST00000509162 PRR4Q16378 134 aa4.06□□□□□ -1.76
TOPBP1-207ENST00000509162 SLC25A34Q6PIV7 304 aa4.06□□□□□ -1.76
TOPBP1-207ENST00000509162 FAM218AQ96MZ4 157 aa4.06□□□□□ -1.76
TOPBP1-207ENST00000509162 TRAV13-2A0A0B4J235 113 aa4.05□□□□□ -1.76
TOPBP1-207ENST00000509162 K7ERJ3 54 aa4.05□□□□□ -1.76
TOPBP1-207ENST00000509162 Q8N377 158 aa4.05□□□□□ -1.76
TOPBP1-207ENST00000509162 HIST1H4GQ99525 98 aa4.05□□□□□ -1.76
TOPBP1-207ENST00000509162 DHRS4-AS1Q9P1J3 65 aa4.05□□□□□ -1.76
TOPBP1-207ENST00000509162 A0A0B4J2C4 111 aa4.04□□□□□ -1.76
TOPBP1-207ENST00000509162 S100A12P80511 92 aa4.04□□□□□ -1.76
TOPBP1-207ENST00000509162 Q1RN00 199 aa4.04□□□□□ -1.76
TOPBP1-207ENST00000509162 LINC00575Q6W349 94 aa4.04□□□□□ -1.76
TOPBP1-207ENST00000509162 KRTAP13-3Q3SY46 172 aa4.03□□□□□ -1.76
TOPBP1-207ENST00000509162 C9orf153Q5TBE3 101 aa4.03□□□□□ -1.76
TOPBP1-207ENST00000509162 CEND1Q8N111 149 aa4.03□□□□□ -1.76
TOPBP1-207ENST00000509162 COPS9Q8WXC6 57 aa4.03□□□□□ -1.76
TOPBP1-207ENST00000509162 Q6ZQY7 126 aa4.02□□□□□ -1.77
TOPBP1-207ENST00000509162 DEFB105AQ8NG35 78 aa4.02□□□□□ -1.77
TOPBP1-207ENST00000509162 H7C2G1 150 aa4.01□□□□□ -1.77
TOPBP1-207ENST00000509162 RPS29P62273 56 aaKnown RBP4.01□□□□□ -1.77
TOPBP1-207ENST00000509162 TAL2Q16559 108 aa4.01□□□□□ -1.77
TOPBP1-207ENST00000509162 TPRXLQ17RH7 258 aa4.01□□□□□ -1.77
TOPBP1-207ENST00000509162 SSBP3-AS1Q7Z2R9 100 aa4.01□□□□□ -1.77
TOPBP1-207ENST00000509162 CBY1Q9Y3M2 126 aa4.01□□□□□ -1.77
TOPBP1-207ENST00000509162 IGLV7-46A0A075B6I9 117 aa4□□□□□ -1.77
TOPBP1-207ENST00000509162 TEX49A0A1B0GTD5 131 aa4□□□□□ -1.77
TOPBP1-207ENST00000509162 LOC105371267A0A1B0GV96 52 aa4□□□□□ -1.77
TOPBP1-207ENST00000509162 HINT1P49773 126 aaPredicted RBP4□□□□□ -1.77
TOPBP1-207ENST00000509162 HSD52Q0P140 79 aa4□□□□□ -1.77
TOPBP1-207ENST00000509162 SPAG11AQ6PDA7 123 aa4□□□□□ -1.77
TOPBP1-207ENST00000509162 HRCT1Q6UXD1 115 aa4□□□□□ -1.77
TOPBP1-207ENST00000509162 Q6ZVQ6 151 aa4□□□□□ -1.77
TOPBP1-207ENST00000509162 KRTAP4-1Q9BYQ7 146 aa4□□□□□ -1.77
TOPBP1-207ENST00000509162 PRO1933Q9H354 126 aa4□□□□□ -1.77
TOPBP1-207ENST00000509162 SPINK1P00995 79 aa3.99□□□□□ -1.77
TOPBP1-207ENST00000509162 IGKV2-30P06310 120 aa3.99□□□□□ -1.77
TOPBP1-207ENST00000509162 CTAG1AP78358 180 aa3.99□□□□□ -1.77
TOPBP1-207ENST00000509162 IGLV8-61A0A075B6I0 122 aa3.98□□□□□ -1.77
TOPBP1-207ENST00000509162 hADV29S1A0JD25 119 aa3.98□□□□□ -1.77
TOPBP1-207ENST00000509162 FP248Q71RG6 208 aaPredicted RBP3.98□□□□□ -1.77
TOPBP1-207ENST00000509162 NHP2Q9NX24 153 aaKnown RBP3.98□□□□□ -1.77
TOPBP1-207ENST00000509162 BVES-AS1Q5T3Y7 98 aa3.97□□□□□ -1.77
TOPBP1-207ENST00000509162 IGFL1Q6UW32 110 aa3.97□□□□□ -1.77
TOPBP1-207ENST00000509162 CLEC2BQ92478 149 aa3.97□□□□□ -1.77
TOPBP1-207ENST00000509162 RAB37Q96AX2 223 aa3.97□□□□□ -1.77
TOPBP1-207ENST00000509162 UQCR10Q9UDW1 63 aa3.97□□□□□ -1.77
TOPBP1-207ENST00000509162 LAMTOR3Q9UHA4 124 aa3.97□□□□□ -1.77
TOPBP1-207ENST00000509162 H3BUT2 72 aa3.96□□□□□ -1.78
TOPBP1-207ENST00000509162 SMIM6P0DI80 62 aa3.96□□□□□ -1.78
TOPBP1-207ENST00000509162 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.96□□□□□ -1.78
TOPBP1-207ENST00000509162 PRO1854Q9UHT4 67 aa3.96□□□□□ -1.78
TOPBP1-207ENST00000509162 SLC25A20O43772 301 aa3.94□□□□□ -1.78
TOPBP1-207ENST00000509162 CD164Q04900 197 aa3.94□□□□□ -1.78
TOPBP1-207ENST00000509162 C1orf195Q5TG92 126 aa3.94□□□□□ -1.78
TOPBP1-207ENST00000509162 Q5XG85 94 aa3.94□□□□□ -1.78
TOPBP1-207ENST00000509162 FLGP20930 4061 aaPredicted RBP3.94□□□□□ -1.78
TOPBP1-207ENST00000509162 VAMP3Q15836 100 aa3.93□□□□□ -1.78
TOPBP1-207ENST00000509162 NAA38Q9BRA0 125 aaKnown RBP3.93□□□□□ -1.78
TOPBP1-207ENST00000509162 PRAC1Q96KF2 57 aa3.92□□□□□ -1.78
TOPBP1-207ENST00000509162 TRBV7-7A0A0K0K1E9 115 aa3.91□□□□□ -1.78
TOPBP1-207ENST00000509162 H0YGX0 51 aa3.91□□□□□ -1.78
TOPBP1-207ENST00000509162 ASB16-AS1Q495Z4 193 aa3.91□□□□□ -1.78
TOPBP1-207ENST00000509162 OCIAD2Q56VL3 154 aa3.91□□□□□ -1.78
TOPBP1-207ENST00000509162 Q8N9P0 234 aaPredicted RBP3.91□□□□□ -1.78
TOPBP1-207ENST00000509162 PPDPFLQ8WWR9 84 aa3.91□□□□□ -1.78
TOPBP1-207ENST00000509162 LIMD2Q9BT23 127 aa3.91□□□□□ -1.78
TOPBP1-207ENST00000509162 A0A1B0GV72 72 aa3.9□□□□□ -1.79
TOPBP1-207ENST00000509162 A0A1B0GX51 115 aa3.9□□□□□ -1.79
TOPBP1-207ENST00000509162 A0A1W2PNM2 257 aa3.9□□□□□ -1.79
TOPBP1-207ENST00000509162 C9orf92A6NGG3 77 aa3.9□□□□□ -1.79
TOPBP1-207ENST00000509162 LST1O00453 97 aa3.9□□□□□ -1.79
TOPBP1-207ENST00000509162 KRTAP19-2Q3LHN2 52 aa3.9□□□□□ -1.79
TOPBP1-207ENST00000509162 Q96NJ1 140 aa3.9□□□□□ -1.79
TOPBP1-207ENST00000509162 NDUFV3P56181 108 aaKnown RBP3.89□□□□□ -1.79
TOPBP1-207ENST00000509162 LCE1AQ5T7P2 110 aa3.89□□□□□ -1.79
TOPBP1-207ENST00000509162 KRTAP5-11Q6L8G4 156 aa3.89□□□□□ -1.79
TOPBP1-207ENST00000509162 F8WEM9 126 aa3.88□□□□□ -1.79
TOPBP1-207ENST00000509162 Q6JHZ5 121 aa3.88□□□□□ -1.79
TOPBP1-207ENST00000509162 TCL1BO95988 128 aa3.87□□□□□ -1.79
TOPBP1-207ENST00000509162 PSMB2P49721 201 aa3.87□□□□□ -1.79
TOPBP1-207ENST00000509162 Q6Q795 121 aa3.87□□□□□ -1.79
TOPBP1-207ENST00000509162 TRACP01848 142 aa3.86□□□□□ -1.79
TOPBP1-207ENST00000509162 SNHG12Q9BXW3 62 aa3.86□□□□□ -1.79
TOPBP1-207ENST00000509162 A0A087WSZ3 146 aa3.85□□□□□ -1.79
TOPBP1-207ENST00000509162 TAX1BP3O14907 124 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms