RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 CCDC179H3BU77 68 aa5.74□□□□□ -1.49
HTT-205ENST00000509043 BPY2O14599 106 aa5.74□□□□□ -1.49
HTT-205ENST00000509043 LY6G6CO95867 125 aa5.74□□□□□ -1.49
HTT-205ENST00000509043 ZNF706Q9Y5V0 76 aaPredicted RBP5.74□□□□□ -1.49
HTT-205ENST00000509043 PRKDCP78527 4128 aaKnown RBP5.73□□□□□ -1.49
HTT-205ENST00000509043 RPL37AP61513 92 aaKnown RBP5.73□□□□□ -1.49
HTT-205ENST00000509043 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.73□□□□□ -1.49
HTT-205ENST00000509043 STARD9Q9P2P6 4700 aa5.73□□□□□ -1.49
HTT-205ENST00000509043 TENM2Q9NT68 2774 aa5.72□□□□□ -1.49
HTT-205ENST00000509043 LYSTQ99698 3801 aa5.72□□□□□ -1.49
HTT-205ENST00000509043 DNAH10Q8IVF4 4471 aa5.72□□□□□ -1.49
HTT-205ENST00000509043 KRTAP11-1Q8IUC1 163 aa5.72□□□□□ -1.49
HTT-205ENST00000509043 PANO1I0J062 215 aa5.71□□□□□ -1.5
HTT-205ENST00000509043 C9orf153Q5TBE3 101 aa5.71□□□□□ -1.5
HTT-205ENST00000509043 IGFL1Q6UW32 110 aa5.71□□□□□ -1.5
HTT-205ENST00000509043 DNHD1Q96M86 4753 aa5.7□□□□□ -1.5
HTT-205ENST00000509043 TRAV7A0A075B6U4 112 aa5.7□□□□□ -1.5
HTT-205ENST00000509043 LINC00483Q53H64 154 aa5.69□□□□□ -1.5
HTT-205ENST00000509043 DNAH6Q9C0G6 4158 aa5.68□□□□□ -1.5
HTT-205ENST00000509043 FBN3Q75N90 2809 aa5.67□□□□□ -1.5
HTT-205ENST00000509043 ZNF861PO60384 105 aa5.67□□□□□ -1.5
HTT-205ENST00000509043 IGKV4-1P06312 121 aa5.67□□□□□ -1.5
HTT-205ENST00000509043 PSORS1C2Q9UIG4 136 aa5.66□□□□□ -1.5
HTT-205ENST00000509043 SCXQ7RTU7 201 aa5.65□□□□□ -1.5
HTT-205ENST00000509043 ALMS1Q8TCU4 4167 aa5.63□□□□□ -1.51
HTT-205ENST00000509043 A0A087WSZ3 146 aa5.63□□□□□ -1.51
HTT-205ENST00000509043 J3KT08 172 aa5.63□□□□□ -1.51
HTT-205ENST00000509043 DNAH17Q9UFH2 4485 aa5.62□□□□□ -1.51
HTT-205ENST00000509043 IGLV7-43P04211 117 aa5.62□□□□□ -1.51
HTT-205ENST00000509043 DSCR10P59022 87 aa5.62□□□□□ -1.51
HTT-205ENST00000509043 TMEM258P61165 79 aa5.62□□□□□ -1.51
HTT-205ENST00000509043 Q6ZSA8 131 aa5.62□□□□□ -1.51
HTT-205ENST00000509043 SS18L2Q9UHA2 77 aa5.62□□□□□ -1.51
HTT-205ENST00000509043 HECTD4Q9Y4D8 3996 aa5.62□□□□□ -1.51
HTT-205ENST00000509043 LCE2BO14633 110 aa5.61□□□□□ -1.51
HTT-205ENST00000509043 DNAH2Q9P225 4427 aa5.6□□□□□ -1.51
HTT-205ENST00000509043 NDUFC1O43677 76 aa5.6□□□□□ -1.51
HTT-205ENST00000509043 KLKP1Q107X0 134 aa5.6□□□□□ -1.51
HTT-205ENST00000509043 Q8N9L7 120 aa5.6□□□□□ -1.51
HTT-205ENST00000509043 OCR1Q9BZK8 76 aa5.59□□□□□ -1.51
HTT-205ENST00000509043 HCG22E2RYF7 251 aa5.58□□□□□ -1.52
HTT-205ENST00000509043 K7EQZ3 153 aa5.58□□□□□ -1.52
HTT-205ENST00000509043 KRTAP10-2P60368 255 aa5.58□□□□□ -1.52
HTT-205ENST00000509043 LINC00336Q6ZUF6 198 aa5.58□□□□□ -1.52
HTT-205ENST00000509043 C20orf197Q8N268 126 aa5.58□□□□□ -1.52
HTT-205ENST00000509043 CIRBP-AS1Q8TBR5 109 aa5.58□□□□□ -1.52
HTT-205ENST00000509043 LINC00472Q9H8W2 130 aa5.58□□□□□ -1.52
HTT-205ENST00000509043 IGLV9-49A0A0B4J1Y8 123 aa5.57□□□□□ -1.52
HTT-205ENST00000509043 A8MWP4 228 aa5.57□□□□□ -1.52
HTT-205ENST00000509043 KMT2AQ03164 3969 aa5.56□□□□□ -1.52
HTT-205ENST00000509043 A0A0G2JQZ4 141 aa5.56□□□□□ -1.52
HTT-205ENST00000509043 NDUFB1O75438 58 aa5.56□□□□□ -1.52
HTT-205ENST00000509043 CD164Q04900 197 aa5.56□□□□□ -1.52
HTT-205ENST00000509043 SSBP3-AS1Q7Z2R9 100 aa5.56□□□□□ -1.52
HTT-205ENST00000509043 PRR15Q8IV56 129 aa5.56□□□□□ -1.52
HTT-205ENST00000509043 TGP01266 2768 aa5.54□□□□□ -1.52
HTT-205ENST00000509043 LCE6AA0A183 80 aa5.54□□□□□ -1.52
HTT-205ENST00000509043 KRTAP10-1P60331 282 aa5.54□□□□□ -1.52
HTT-205ENST00000509043 RPS28P62857 69 aaKnown RBP5.54□□□□□ -1.52
HTT-205ENST00000509043 MOBPQ13875 183 aa5.54□□□□□ -1.52
HTT-205ENST00000509043 FAM229BQ4G0N7 80 aa5.54□□□□□ -1.52
HTT-205ENST00000509043 TMEM254Q8TBM7 123 aa5.54□□□□□ -1.52
HTT-205ENST00000509043 FAM30AQ9NZY2 134 aa5.54□□□□□ -1.52
HTT-205ENST00000509043 ATP5EP56381 51 aaPredicted RBP5.53□□□□□ -1.52
HTT-205ENST00000509043 C5orf47Q569G3 176 aa5.53□□□□□ -1.52
HTT-205ENST00000509043 A0A0U1RQV1 116 aa5.51□□□□□ -1.53
HTT-205ENST00000509043 KRTAP29-1A8MX34 341 aaPredicted RBP5.51□□□□□ -1.53
HTT-205ENST00000509043 H7BZZ5 65 aa5.51□□□□□ -1.53
HTT-205ENST00000509043 ASB16-AS1Q495Z4 193 aa5.51□□□□□ -1.53
HTT-205ENST00000509043 CASC2Q6XLA1 102 aa5.51□□□□□ -1.53
HTT-205ENST00000509043 CYSTM1Q9H1C7 97 aa5.51□□□□□ -1.53
HTT-205ENST00000509043 DEFB116Q30KQ4 102 aa5.5□□□□□ -1.53
HTT-205ENST00000509043 DNAH8Q96JB1 4490 aa5.5□□□□□ -1.53
HTT-205ENST00000509043 FRAS1Q86XX4 4008 aa5.5□□□□□ -1.53
HTT-205ENST00000509043 FAM236DA0A1B0GTK5 79 aa5.49□□□□□ -1.53
HTT-205ENST00000509043 H3BPC8 53 aa5.49□□□□□ -1.53
HTT-205ENST00000509043 CDK2AP2O75956 126 aa5.49□□□□□ -1.53
HTT-205ENST00000509043 FAM236CP0DP71 79 aa5.49□□□□□ -1.53
HTT-205ENST00000509043 Q96NJ1 140 aa5.49□□□□□ -1.53
HTT-205ENST00000509043 DNAH11Q96DT5 4516 aa5.48□□□□□ -1.53
HTT-205ENST00000509043 Q5XG85 94 aa5.48□□□□□ -1.53
HTT-205ENST00000509043 SRRM2Q9UQ35 2752 aaKnown RBP5.47□□□□□ -1.53
HTT-205ENST00000509043 MP68P56378 58 aa5.47□□□□□ -1.53
HTT-205ENST00000509043 WFDC13Q8IUB5 93 aa5.47□□□□□ -1.53
HTT-205ENST00000509043 TP53AIP1Q9HCN2 124 aa5.47□□□□□ -1.53
HTT-205ENST00000509043 SNURFQ9Y675 71 aa5.47□□□□□ -1.53
HTT-205ENST00000509043 MMP24-AS1A0A0U1RRL7 71 aa5.46□□□□□ -1.54
HTT-205ENST00000509043 A0A1B0GVX0 72 aa5.46□□□□□ -1.54
HTT-205ENST00000509043 ANAPC11Q9NYG5 84 aa5.46□□□□□ -1.54
HTT-205ENST00000509043 DNAH5Q8TE73 4624 aa5.45□□□□□ -1.54
HTT-205ENST00000509043 hDV103S1A0JD37 113 aa5.45□□□□□ -1.54
HTT-205ENST00000509043 HRCT1Q6UXD1 115 aa5.45□□□□□ -1.54
HTT-205ENST00000509043 SPINK6Q6UWN8 80 aa5.44□□□□□ -1.54
HTT-205ENST00000509043 ZCCHC13Q8WW36 166 aaKnown RBP5.44□□□□□ -1.54
HTT-205ENST00000509043 C8orf17Q9NRJ1 99 aa5.44□□□□□ -1.54
HTT-205ENST00000509043 PKD1P98161 4303 aa5.44□□□□□ -1.54
HTT-205ENST00000509043 LIMD2Q9BT23 127 aa5.43□□□□□ -1.54
HTT-205ENST00000509043 SERP1Q9Y6X1 66 aa5.43□□□□□ -1.54
HTT-205ENST00000509043 FAT2Q9NYQ8 4349 aa5.42□□□□□ -1.54
HTT-205ENST00000509043 C8orf87E5RJ46 101 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms