RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 S100A7L2Q5SY68 101 aa2.62□□□□□ -1.99
NUP54-206ENST00000508465 HIST1H4GQ99525 98 aa2.62□□□□□ -1.99
NUP54-206ENST00000508465 RETNLBQ9BQ08 111 aa2.62□□□□□ -1.99
NUP54-206ENST00000508465 MIEN1Q9BRT3 115 aa2.62□□□□□ -1.99
NUP54-206ENST00000508465 LOC107984156A0A0G2JMH3 177 aa2.61□□□□□ -1.99
NUP54-206ENST00000508465 SPRR1AP35321 89 aa2.61□□□□□ -1.99
NUP54-206ENST00000508465 FAM229BQ4G0N7 80 aa2.61□□□□□ -1.99
NUP54-206ENST00000508465 ARL17AQ8IVW1 177 aa2.61□□□□□ -1.99
NUP54-206ENST00000508465 Q8N377 158 aa2.61□□□□□ -1.99
NUP54-206ENST00000508465 LINC00337Q8N6G1 96 aa2.61□□□□□ -1.99
NUP54-206ENST00000508465 OR13C6PQ8NH95 151 aa2.61□□□□□ -1.99
NUP54-206ENST00000508465 LINC00308Q8TCZ7 52 aa2.61□□□□□ -1.99
NUP54-206ENST00000508465 SPRR4Q96PI1 79 aa2.61□□□□□ -1.99
NUP54-206ENST00000508465 Q9BRP9 147 aa2.61□□□□□ -1.99
NUP54-206ENST00000508465 TRBV10-2A0A0K0K1G8 114 aa2.6□□□□□ -1.99
NUP54-206ENST00000508465 IGLV6-57P01721 117 aa2.6□□□□□ -1.99
NUP54-206ENST00000508465 S100A1P23297 94 aa2.6□□□□□ -1.99
NUP54-206ENST00000508465 PCP2Q8IVA1 136 aa2.6□□□□□ -1.99
NUP54-206ENST00000508465 HIST3H2BBQ8N257 126 aa2.6□□□□□ -1.99
NUP54-206ENST00000508465 LINC00304Q8N9R0 145 aa2.6□□□□□ -1.99
NUP54-206ENST00000508465 ST20-AS1Q8NBB2 130 aa2.6□□□□□ -1.99
NUP54-206ENST00000508465 SPANXB1Q9NS25 103 aaPredicted RBP2.6□□□□□ -1.99
NUP54-206ENST00000508465 TRAV23DV6A0A075B6W5 121 aa2.59□□□□□ -1.99
NUP54-206ENST00000508465 C20orf202A1L168 122 aa2.59□□□□□ -1.99
NUP54-206ENST00000508465 TIMM17BO60830 172 aa2.59□□□□□ -1.99
NUP54-206ENST00000508465 NDUFC2O95298 119 aa2.59□□□□□ -1.99
NUP54-206ENST00000508465 CXCL6P80162 114 aa2.59□□□□□ -1.99
NUP54-206ENST00000508465 S100A12P80511 92 aa2.59□□□□□ -1.99
NUP54-206ENST00000508465 SCGB1D4Q6XE38 83 aa2.59□□□□□ -1.99
NUP54-206ENST00000508465 MUSTN1Q8IVN3 82 aa2.59□□□□□ -1.99
NUP54-206ENST00000508465 HIST1H2BLQ99880 126 aa2.59□□□□□ -1.99
NUP54-206ENST00000508465 ZNF73O43830 326 aaPredicted RBP2.58□□□□□ -2
NUP54-206ENST00000508465 S100A2P29034 98 aa2.58□□□□□ -2
NUP54-206ENST00000508465 MOBPQ13875 183 aa2.58□□□□□ -2
NUP54-206ENST00000508465 VAMP3Q15836 100 aa2.58□□□□□ -2
NUP54-206ENST00000508465 Q6ZRX8 168 aa2.58□□□□□ -2
NUP54-206ENST00000508465 DEFB105AQ8NG35 78 aa2.58□□□□□ -2
NUP54-206ENST00000508465 ZNF706Q9Y5V0 76 aaPredicted RBP2.58□□□□□ -2
NUP54-206ENST00000508465 IGLV8-61A0A075B6I0 122 aa2.57□□□□□ -2
NUP54-206ENST00000508465 A6NDN8 102 aa2.57□□□□□ -2
NUP54-206ENST00000508465 S100A6P06703 90 aa2.57□□□□□ -2
NUP54-206ENST00000508465 C6orf99Q4VX62 202 aa2.57□□□□□ -2
NUP54-206ENST00000508465 LINC00483Q53H64 154 aa2.57□□□□□ -2
NUP54-206ENST00000508465 SPANXDQ9BXN6 97 aa2.57□□□□□ -2
NUP54-206ENST00000508465 SPANXCQ9NY87 97 aa2.57□□□□□ -2
NUP54-206ENST00000508465 COX7BP24311 80 aa2.56□□□□□ -2
NUP54-206ENST00000508465 HINT1P49773 126 aaPredicted RBP2.56□□□□□ -2
NUP54-206ENST00000508465 JOSD1Q15040 202 aaPredicted RBP2.56□□□□□ -2
NUP54-206ENST00000508465 HRCT1Q6UXD1 115 aa2.56□□□□□ -2
NUP54-206ENST00000508465 V9GYY9 64 aa2.56□□□□□ -2
NUP54-206ENST00000508465 A0A0G2JQZ4 141 aa2.55□□□□□ -2
NUP54-206ENST00000508465 IFITM1P13164 125 aa2.55□□□□□ -2
NUP54-206ENST00000508465 TAL2Q16559 108 aa2.55□□□□□ -2
NUP54-206ENST00000508465 C9orf153Q5TBE3 101 aa2.55□□□□□ -2
NUP54-206ENST00000508465 SPAG11AQ6PDA7 123 aa2.55□□□□□ -2
NUP54-206ENST00000508465 SMIM11BQ8TCY0 68 aa2.55□□□□□ -2
NUP54-206ENST00000508465 SPINK1P00995 79 aa2.54□□□□□ -2
NUP54-206ENST00000508465 ELOF1P60002 83 aaKnown RBP2.54□□□□□ -2
NUP54-206ENST00000508465 Q1RN00 199 aa2.54□□□□□ -2
NUP54-206ENST00000508465 SSBP3-AS1Q7Z2R9 100 aa2.54□□□□□ -2
NUP54-206ENST00000508465 C14orf144Q96I85 54 aa2.54□□□□□ -2
NUP54-206ENST00000508465 C12orf57Q99622 126 aa2.54□□□□□ -2
NUP54-206ENST00000508465 CBY1Q9Y3M2 126 aa2.54□□□□□ -2
NUP54-206ENST00000508465 MUC2Q02817 5179 aa2.54□□□□□ -2
NUP54-206ENST00000508465 AKR1D1P51857 326 aa2.53□□□□□ -2
NUP54-206ENST00000508465 Q6ZVH6 145 aa2.53□□□□□ -2
NUP54-206ENST00000508465 COPS9Q8WXC6 57 aa2.53□□□□□ -2
NUP54-206ENST00000508465 TRAV13-2A0A0B4J235 113 aa2.52□□□□□ -2.01
NUP54-206ENST00000508465 TRBV7-6A0A0J9YX20 115 aa2.52□□□□□ -2.01
NUP54-206ENST00000508465 TEX49A0A1B0GTD5 131 aa2.52□□□□□ -2.01
NUP54-206ENST00000508465 H7C2G1 150 aa2.52□□□□□ -2.01
NUP54-206ENST00000508465 COX8AP10176 69 aa2.52□□□□□ -2.01
NUP54-206ENST00000508465 SPRR1BP22528 89 aa2.52□□□□□ -2.01
NUP54-206ENST00000508465 LAMTOR3Q9UHA4 124 aa2.52□□□□□ -2.01
NUP54-206ENST00000508465 SLC25A20O43772 301 aa2.51□□□□□ -2.01
NUP54-206ENST00000508465 CTAG1AP78358 180 aa2.51□□□□□ -2.01
NUP54-206ENST00000508465 TPRXLQ17RH7 258 aa2.51□□□□□ -2.01
NUP54-206ENST00000508465 SPATA45Q537H7 98 aa2.51□□□□□ -2.01
NUP54-206ENST00000508465 LINC00575Q6W349 94 aa2.51□□□□□ -2.01
NUP54-206ENST00000508465 SLC25A34Q6PIV7 304 aa2.5□□□□□ -2.01
NUP54-206ENST00000508465 FP248Q71RG6 208 aaPredicted RBP2.5□□□□□ -2.01
NUP54-206ENST00000508465 VAMP8Q9BV40 100 aa2.5□□□□□ -2.01
NUP54-206ENST00000508465 IGLV5-48A0A075B6I7 105 aa2.49□□□□□ -2.01
NUP54-206ENST00000508465 hADV29S1A0JD25 119 aa2.49□□□□□ -2.01
NUP54-206ENST00000508465 C9orf92A6NGG3 77 aa2.49□□□□□ -2.01
NUP54-206ENST00000508465 DLEU1O43261 78 aa2.49□□□□□ -2.01
NUP54-206ENST00000508465 C2orf91Q6ZV80 131 aa2.49□□□□□ -2.01
NUP54-206ENST00000508465 PRO1933Q9H354 126 aa2.49□□□□□ -2.01
NUP54-206ENST00000508465 Q6ZQY7 126 aa2.48□□□□□ -2.01
NUP54-206ENST00000508465 RAB37Q96AX2 223 aa2.48□□□□□ -2.01
NUP54-206ENST00000508465 KRTAP4-1Q9BYQ7 146 aa2.48□□□□□ -2.01
NUP54-206ENST00000508465 FAT4Q6V0I7 4981 aa2.47□□□□□ -2.01
NUP54-206ENST00000508465 RPS29P62273 56 aaKnown RBP2.47□□□□□ -2.01
NUP54-206ENST00000508465 C5orf47Q569G3 176 aa2.47□□□□□ -2.01
NUP54-206ENST00000508465 OCIAD2Q56VL3 154 aa2.47□□□□□ -2.01
NUP54-206ENST00000508465 PYY3Q5JQD4 70 aa2.47□□□□□ -2.01
NUP54-206ENST00000508465 C1orf195Q5TG92 126 aa2.47□□□□□ -2.01
NUP54-206ENST00000508465 CEND1Q8N111 149 aa2.47□□□□□ -2.01
NUP54-206ENST00000508465 NHP2Q9NX24 153 aaKnown RBP2.47□□□□□ -2.01
NUP54-206ENST00000508465 HIGD1BQ9P298 99 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms