RNA–Protein interactions for RNA: ENST00000506734.5

SMN2-206, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 1,550 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-206ENST00000506734 A0A1B0GVY2 172 aa11.33□□□□□ -0.6
SMN2-206ENST00000506734 C1orf137Q5JT78 98 aa11.33□□□□□ -0.6
SMN2-206ENST00000506734 LINC00846Q9NV44 126 aa11.31□□□□□ -0.6
SMN2-206ENST00000506734 ZNF861PO60384 105 aa11.29□□□□□ -0.6
SMN2-206ENST00000506734 MT-ATP8P03928 68 aa11.29□□□□□ -0.6
SMN2-206ENST00000506734 SRRM2Q9UQ35 2752 aaKnown RBP11.29□□□□□ -0.6
SMN2-206ENST00000506734 LRP1BQ9NZR2 4599 aa11.28□□□□□ -0.6
SMN2-206ENST00000506734 F8WEM9 126 aa11.28□□□□□ -0.6
SMN2-206ENST00000506734 LINC00643Q86TS7 51 aa11.28□□□□□ -0.6
SMN2-206ENST00000506734 IGLV8-61A0A075B6I0 122 aa11.27□□□□□ -0.61
SMN2-206ENST00000506734 KRTAP3-3Q9BYR6 98 aa11.27□□□□□ -0.61
SMN2-206ENST00000506734 KRTAP3-2Q9BYR7 98 aa11.27□□□□□ -0.61
SMN2-206ENST00000506734 IGLV7-43P04211 117 aa11.26□□□□□ -0.61
SMN2-206ENST00000506734 SPRR4Q96PI1 79 aa11.25□□□□□ -0.61
SMN2-206ENST00000506734 ZNF706Q9Y5V0 76 aaPredicted RBP11.25□□□□□ -0.61
SMN2-206ENST00000506734 DYNC1H1Q14204 4646 aaKnown RBP11.24□□□□□ -0.61
SMN2-206ENST00000506734 LINC00483Q53H64 154 aa11.24□□□□□ -0.61
SMN2-206ENST00000506734 HAMPP81172 84 aa11.23□□□□□ -0.61
SMN2-206ENST00000506734 A0A1B0GW54 56 aa11.21□□□□□ -0.61
SMN2-206ENST00000506734 UBL5Q9BZL1 73 aa11.2□□□□□ -0.62
SMN2-206ENST00000506734 A0A1W2PNM2 257 aa11.2□□□□□ -0.62
SMN2-206ENST00000506734 Q8NBF4 154 aa11.2□□□□□ -0.62
SMN2-206ENST00000506734 TRBV7-7A0A0K0K1E9 115 aa11.18□□□□□ -0.62
SMN2-206ENST00000506734 Q6JHZ5 121 aa11.18□□□□□ -0.62
SMN2-206ENST00000506734 IGFL1Q6UW32 110 aa11.18□□□□□ -0.62
SMN2-206ENST00000506734 Q6Q795 121 aa11.16□□□□□ -0.62
SMN2-206ENST00000506734 SCGB1A1P11684 91 aa11.15□□□□□ -0.62
SMN2-206ENST00000506734 Q6ZVQ6 151 aa11.15□□□□□ -0.62
SMN2-206ENST00000506734 VPS13BQ7Z7G8 4022 aa11.15□□□□□ -0.62
SMN2-206ENST00000506734 ATP5EP2Q5VTU8 51 aa11.14□□□□□ -0.63
SMN2-206ENST00000506734 IMUPQ9GZP8 106 aa11.14□□□□□ -0.63
SMN2-206ENST00000506734 CRYGAP11844 174 aa11.13□□□□□ -0.63
SMN2-206ENST00000506734 APOBP04114 4563 aaKnown RBP11.12□□□□□ -0.63
SMN2-206ENST00000506734 RPL37AP61513 92 aaKnown RBP11.11□□□□□ -0.63
SMN2-206ENST00000506734 RYR3Q15413 4870 aa11.11□□□□□ -0.63
SMN2-206ENST00000506734 SVIPQ8NHG7 77 aa11.11□□□□□ -0.63
SMN2-206ENST00000506734 A0A0G2JQZ4 141 aa11.09□□□□□ -0.63
SMN2-206ENST00000506734 IGKV3D-7A0A0C4DH55 119 aa11.08□□□□□ -0.64
SMN2-206ENST00000506734 IGLV9-49A0A0B4J1Y8 123 aa11.07□□□□□ -0.64
SMN2-206ENST00000506734 NREPQ16612 68 aa11.07□□□□□ -0.64
SMN2-206ENST00000506734 C9orf153Q5TBE3 101 aa11.06□□□□□ -0.64
SMN2-206ENST00000506734 CXCL6P80162 114 aa11.05□□□□□ -0.64
SMN2-206ENST00000506734 ANAPC11Q9NYG5 84 aa11.05□□□□□ -0.64
SMN2-206ENST00000506734 MOBPQ13875 183 aa11.02□□□□□ -0.65
SMN2-206ENST00000506734 A0A087WSZ3 146 aa10.99□□□□□ -0.65
SMN2-206ENST00000506734 FAM229BQ4G0N7 80 aa10.99□□□□□ -0.65
SMN2-206ENST00000506734 SMR3BP02814 79 aaPredicted RBP10.96□□□□□ -0.65
SMN2-206ENST00000506734 KRTAP1-4P0C5Y4 121 aa10.96□□□□□ -0.65
SMN2-206ENST00000506734 SPINK6Q6UWN8 80 aa10.96□□□□□ -0.65
SMN2-206ENST00000506734 BPY2O14599 106 aa10.95□□□□□ -0.66
SMN2-206ENST00000506734 PCP4P48539 62 aa10.95□□□□□ -0.66
SMN2-206ENST00000506734 HIST1H4AP62805 103 aaKnown RBP10.94□□□□□ -0.66
SMN2-206ENST00000506734 SSBP3-AS1Q7Z2R9 100 aa10.94□□□□□ -0.66
SMN2-206ENST00000506734 FAT1Q14517 4588 aa10.93□□□□□ -0.66
SMN2-206ENST00000506734 FAM236AA0A1B0GUQ0 79 aa10.93□□□□□ -0.66
SMN2-206ENST00000506734 FAM236BA0A1B0GV22 79 aa10.93□□□□□ -0.66
SMN2-206ENST00000506734 KRTAP10-4P60372 401 aaPredicted RBP10.93□□□□□ -0.66
SMN2-206ENST00000506734 A0A087WVE0 104 aa10.92□□□□□ -0.66
SMN2-206ENST00000506734 A0A087X002 238 aa10.92□□□□□ -0.66
SMN2-206ENST00000506734 KRTAP13-2Q52LG2 175 aa10.9□□□□□ -0.67
SMN2-206ENST00000506734 CD164Q04900 197 aa10.89□□□□□ -0.67
SMN2-206ENST00000506734 CDK2AP2O75956 126 aa10.87□□□□□ -0.67
SMN2-206ENST00000506734 IGKV4-1P06312 121 aa10.87□□□□□ -0.67
SMN2-206ENST00000506734 SS18L2Q9UHA2 77 aa10.87□□□□□ -0.67
SMN2-206ENST00000506734 DSCR10P59022 87 aa10.86□□□□□ -0.67
SMN2-206ENST00000506734 HRCT1Q6UXD1 115 aa10.86□□□□□ -0.67
SMN2-206ENST00000506734 LINC00472Q9H8W2 130 aa10.86□□□□□ -0.67
SMN2-206ENST00000506734 PLA2G1BP04054 148 aaKnown RBP10.85□□□□□ -0.67
SMN2-206ENST00000506734 Q8N9L7 120 aa10.84□□□□□ -0.67
SMN2-206ENST00000506734 HSPG2P98160 4391 aa10.84□□□□□ -0.67
SMN2-206ENST00000506734 ANAPC13Q9BS18 74 aa10.82□□□□□ -0.68
SMN2-206ENST00000506734 PKHD1L1Q86WI1 4243 aa10.81□□□□□ -0.68
SMN2-206ENST00000506734 DEFB116Q30KQ4 102 aa10.81□□□□□ -0.68
SMN2-206ENST00000506734 Q96NJ1 140 aa10.81□□□□□ -0.68
SMN2-206ENST00000506734 J3KT08 172 aa10.8□□□□□ -0.68
SMN2-206ENST00000506734 ATOX1O00244 68 aa10.8□□□□□ -0.68
SMN2-206ENST00000506734 RYR1P21817 5038 aa10.79□□□□□ -0.68
SMN2-206ENST00000506734 FAM229AH3BQW9 127 aa10.78□□□□□ -0.68
SMN2-206ENST00000506734 K7EQZ3 153 aa10.78□□□□□ -0.68
SMN2-206ENST00000506734 TYMSOSQ8TAI1 123 aa10.76□□□□□ -0.69
SMN2-206ENST00000506734 A8MWP4 228 aa10.75□□□□□ -0.69
SMN2-206ENST00000506734 ASB16-AS1Q495Z4 193 aa10.75□□□□□ -0.69
SMN2-206ENST00000506734 Q5XG85 94 aa10.75□□□□□ -0.69
SMN2-206ENST00000506734 PRR15Q8IV56 129 aa10.72□□□□□ -0.69
SMN2-206ENST00000506734 PRR26Q8N8Z3 221 aa10.72□□□□□ -0.69
SMN2-206ENST00000506734 Q5VSD8 79 aa10.71□□□□□ -0.69
SMN2-206ENST00000506734 EPPK1P58107 5090 aaKnown RBP10.68□□□□□ -0.7
SMN2-206ENST00000506734 NDUFB1O75438 58 aa10.68□□□□□ -0.7
SMN2-206ENST00000506734 HCG22E2RYF7 251 aa10.67□□□□□ -0.7
SMN2-206ENST00000506734 SMIM20Q8N5G0 67 aa10.67□□□□□ -0.7
SMN2-206ENST00000506734 LIMD2Q9BT23 127 aa10.67□□□□□ -0.7
SMN2-206ENST00000506734 SPINK1P00995 79 aa10.66□□□□□ -0.7
SMN2-206ENST00000506734 C4orf48Q5BLP8 95 aa10.66□□□□□ -0.7
SMN2-206ENST00000506734 SERP2Q8N6R1 65 aa10.66□□□□□ -0.7
SMN2-206ENST00000506734 RPS29P62273 56 aaKnown RBP10.65□□□□□ -0.71
SMN2-206ENST00000506734 COX7CP15954 63 aa10.64□□□□□ -0.71
SMN2-206ENST00000506734 SPAG11AQ6PDA7 123 aa10.64□□□□□ -0.71
SMN2-206ENST00000506734 LINC00304Q8N9R0 145 aa10.64□□□□□ -0.71
SMN2-206ENST00000506734 KIAA1109Q2LD37 5005 aa10.63□□□□□ -0.71
SMN2-206ENST00000506734 TRAV7A0A075B6U4 112 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms