RNA–Protein interactions for RNA: ENST00000506401.6

ITGA3-207, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-207ENST00000506401 SPRR1BP22528 89 aa10.84□□□□□ -0.67
ITGA3-207ENST00000506401 RPL37AP61513 92 aaKnown RBP10.84□□□□□ -0.67
ITGA3-207ENST00000506401 C3orf22Q8N5N4 141 aa10.84□□□□□ -0.67
ITGA3-207ENST00000506401 SMR3BP02814 79 aaPredicted RBP10.83□□□□□ -0.68
ITGA3-207ENST00000506401 SPRR4Q96PI1 79 aa10.83□□□□□ -0.68
ITGA3-207ENST00000506401 DSCR8Q96T75 97 aa10.83□□□□□ -0.68
ITGA3-207ENST00000506401 F8WEM9 126 aa10.81□□□□□ -0.68
ITGA3-207ENST00000506401 SMIM29Q86T20 159 aa10.81□□□□□ -0.68
ITGA3-207ENST00000506401 PDE6GP18545 87 aa10.79□□□□□ -0.68
ITGA3-207ENST00000506401 APOBP04114 4563 aaKnown RBP10.78□□□□□ -0.68
ITGA3-207ENST00000506401 LOC110117498A0A087WWA1 95 aa10.78□□□□□ -0.68
ITGA3-207ENST00000506401 LINC00483Q53H64 154 aa10.78□□□□□ -0.68
ITGA3-207ENST00000506401 TRBV7-4A0A0J9YYF1 115 aa10.77□□□□□ -0.69
ITGA3-207ENST00000506401 CDK2AP2O75956 126 aa10.77□□□□□ -0.69
ITGA3-207ENST00000506401 CCKP06307 115 aa10.76□□□□□ -0.69
ITGA3-207ENST00000506401 Q6ZQT0 140 aa10.75□□□□□ -0.69
ITGA3-207ENST00000506401 VPS13BQ7Z7G8 4022 aa10.75□□□□□ -0.69
ITGA3-207ENST00000506401 IGLV8-61A0A075B6I0 122 aa10.73□□□□□ -0.69
ITGA3-207ENST00000506401 ACYP1P07311 99 aa10.72□□□□□ -0.69
ITGA3-207ENST00000506401 CDIP1Q9H305 208 aa10.72□□□□□ -0.69
ITGA3-207ENST00000506401 FAM240AA0A1B0GVK7 77 aa10.71□□□□□ -0.69
ITGA3-207ENST00000506401 SPINK6Q6UWN8 80 aa10.71□□□□□ -0.69
ITGA3-207ENST00000506401 FAM229AH3BQW9 127 aa10.7□□□□□ -0.7
ITGA3-207ENST00000506401 ANAPC11Q9NYG5 84 aa10.7□□□□□ -0.7
ITGA3-207ENST00000506401 IGLV9-49A0A0B4J1Y8 123 aa10.69□□□□□ -0.7
ITGA3-207ENST00000506401 Q6JHZ5 121 aa10.69□□□□□ -0.7
ITGA3-207ENST00000506401 PLA2G1BP04054 148 aaKnown RBP10.68□□□□□ -0.7
ITGA3-207ENST00000506401 C9orf153Q5TBE3 101 aa10.68□□□□□ -0.7
ITGA3-207ENST00000506401 IGFL1Q6UW32 110 aa10.67□□□□□ -0.7
ITGA3-207ENST00000506401 KRTAP10-4P60372 401 aaPredicted RBP10.65□□□□□ -0.7
ITGA3-207ENST00000506401 FAM229BQ4G0N7 80 aa10.63□□□□□ -0.71
ITGA3-207ENST00000506401 Q8NBF4 154 aa10.63□□□□□ -0.71
ITGA3-207ENST00000506401 MT-ATP8P03928 68 aa10.63□□□□□ -0.71
ITGA3-207ENST00000506401 MOBPQ13875 183 aa10.63□□□□□ -0.71
ITGA3-207ENST00000506401 A0A1W2PNM2 257 aa10.62□□□□□ -0.71
ITGA3-207ENST00000506401 A0A0G2JQZ4 141 aa10.61□□□□□ -0.71
ITGA3-207ENST00000506401 A0A1B0GW54 56 aa10.61□□□□□ -0.71
ITGA3-207ENST00000506401 KRTAP1-4P0C5Y4 121 aa10.61□□□□□ -0.71
ITGA3-207ENST00000506401 LINC00846Q9NV44 126 aa10.61□□□□□ -0.71
ITGA3-207ENST00000506401 FAT1Q14517 4588 aa10.6□□□□□ -0.71
ITGA3-207ENST00000506401 CRYGAP11844 174 aa10.59□□□□□ -0.71
ITGA3-207ENST00000506401 Q5VSD8 79 aa10.59□□□□□ -0.71
ITGA3-207ENST00000506401 EPPK1P58107 5090 aaKnown RBP10.59□□□□□ -0.71
ITGA3-207ENST00000506401 SSBP3-AS1Q7Z2R9 100 aa10.58□□□□□ -0.72
ITGA3-207ENST00000506401 RYR1P21817 5038 aa10.57□□□□□ -0.72
ITGA3-207ENST00000506401 A0A087X002 238 aa10.56□□□□□ -0.72
ITGA3-207ENST00000506401 ANAPC13Q9BS18 74 aa10.56□□□□□ -0.72
ITGA3-207ENST00000506401 UBL5Q9BZL1 73 aa10.56□□□□□ -0.72
ITGA3-207ENST00000506401 HSPG2P98160 4391 aa10.56□□□□□ -0.72
ITGA3-207ENST00000506401 Q6Q795 121 aa10.56□□□□□ -0.72
ITGA3-207ENST00000506401 KRTAP13-2Q52LG2 175 aa10.54□□□□□ -0.72
ITGA3-207ENST00000506401 Q8N1X5 172 aa10.52□□□□□ -0.73
ITGA3-207ENST00000506401 LINC00643Q86TS7 51 aa10.51□□□□□ -0.73
ITGA3-207ENST00000506401 NREPQ16612 68 aa10.51□□□□□ -0.73
ITGA3-207ENST00000506401 A0A087WSZ3 146 aa10.49□□□□□ -0.73
ITGA3-207ENST00000506401 HRCT1Q6UXD1 115 aa10.49□□□□□ -0.73
ITGA3-207ENST00000506401 Q6ZVQ6 151 aa10.49□□□□□ -0.73
ITGA3-207ENST00000506401 TYMSOSQ8TAI1 123 aa10.49□□□□□ -0.73
ITGA3-207ENST00000506401 KIAA1109Q2LD37 5005 aa10.48□□□□□ -0.73
ITGA3-207ENST00000506401 TRBV7-7A0A0K0K1E9 115 aa10.48□□□□□ -0.73
ITGA3-207ENST00000506401 CD164Q04900 197 aa10.47□□□□□ -0.73
ITGA3-207ENST00000506401 SS18L2Q9UHA2 77 aa10.47□□□□□ -0.73
ITGA3-207ENST00000506401 PRR26Q8N8Z3 221 aa10.47□□□□□ -0.73
ITGA3-207ENST00000506401 KRTAP17-1Q9BYP8 105 aa10.44□□□□□ -0.74
ITGA3-207ENST00000506401 PKHD1L1Q86WI1 4243 aa10.44□□□□□ -0.74
ITGA3-207ENST00000506401 C4orf48Q5BLP8 95 aa10.42□□□□□ -0.74
ITGA3-207ENST00000506401 ATP5EP2Q5VTU8 51 aa10.41□□□□□ -0.74
ITGA3-207ENST00000506401 IGKV3D-7A0A0C4DH55 119 aa10.4□□□□□ -0.75
ITGA3-207ENST00000506401 BPY2O14599 106 aa10.37□□□□□ -0.75
ITGA3-207ENST00000506401 CXCL6P80162 114 aa10.37□□□□□ -0.75
ITGA3-207ENST00000506401 CCDC179H3BU77 68 aa10.35□□□□□ -0.75
ITGA3-207ENST00000506401 LINC00304Q8N9R0 145 aa10.35□□□□□ -0.75
ITGA3-207ENST00000506401 SPAG11AQ6PDA7 123 aa10.35□□□□□ -0.75
ITGA3-207ENST00000506401 SPINK1P00995 79 aa10.34□□□□□ -0.75
ITGA3-207ENST00000506401 IMUPQ9GZP8 106 aa10.33□□□□□ -0.76
ITGA3-207ENST00000506401 LINC00472Q9H8W2 130 aa10.33□□□□□ -0.76
ITGA3-207ENST00000506401 DEFB116Q30KQ4 102 aa10.32□□□□□ -0.76
ITGA3-207ENST00000506401 LIMD2Q9BT23 127 aa10.32□□□□□ -0.76
ITGA3-207ENST00000506401 Q5XG85 94 aa10.31□□□□□ -0.76
ITGA3-207ENST00000506401 ASB16-AS1Q495Z4 193 aa10.3□□□□□ -0.76
ITGA3-207ENST00000506401 J3KT08 172 aa10.29□□□□□ -0.76
ITGA3-207ENST00000506401 HIST1H4AP62805 103 aaKnown RBP10.29□□□□□ -0.76
ITGA3-207ENST00000506401 BIRC6Q9NR09 4857 aa10.29□□□□□ -0.76
ITGA3-207ENST00000506401 KRTAP10-8P60410 259 aa10.28□□□□□ -0.76
ITGA3-207ENST00000506401 RPS29P62273 56 aaKnown RBP10.28□□□□□ -0.76
ITGA3-207ENST00000506401 SMIM20Q8N5G0 67 aa10.28□□□□□ -0.76
ITGA3-207ENST00000506401 Q96NJ1 140 aa10.28□□□□□ -0.76
ITGA3-207ENST00000506401 IGKV4-1P06312 121 aa10.26□□□□□ -0.77
ITGA3-207ENST00000506401 DSCR10P59022 87 aa10.26□□□□□ -0.77
ITGA3-207ENST00000506401 FLG2Q5D862 2391 aaPredicted RBP10.26□□□□□ -0.77
ITGA3-207ENST00000506401 KRTAP4-5Q9BYR2 181 aa10.24□□□□□ -0.77
ITGA3-207ENST00000506401 Q8N9L7 120 aa10.23□□□□□ -0.77
ITGA3-207ENST00000506401 A8MWP4 228 aa10.21□□□□□ -0.78
ITGA3-207ENST00000506401 NDUFB1O75438 58 aa10.21□□□□□ -0.78
ITGA3-207ENST00000506401 C1orf195Q5TG92 126 aa10.21□□□□□ -0.78
ITGA3-207ENST00000506401 LRP1Q07954 4544 aaKnown RBP10.2□□□□□ -0.78
ITGA3-207ENST00000506401 A0A087WVE0 104 aa10.2□□□□□ -0.78
ITGA3-207ENST00000506401 K7EQZ3 153 aa10.2□□□□□ -0.78
ITGA3-207ENST00000506401 OXTP01178 125 aa10.2□□□□□ -0.78
ITGA3-207ENST00000506401 FAT3Q8TDW7 4589 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms