RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 LINC00483Q53H64 154 aa7.31□□□□□ -1.24
POLR2J3-211ENST00000506060 SMIM29Q86T20 159 aa7.31□□□□□ -1.24
POLR2J3-211ENST00000506060 DNAH11Q96DT5 4516 aa7.31□□□□□ -1.24
POLR2J3-211ENST00000506060 PKD1P98161 4303 aa7.29□□□□□ -1.24
POLR2J3-211ENST00000506060 XGP55808 180 aa7.29□□□□□ -1.24
POLR2J3-211ENST00000506060 UBL5Q9BZL1 73 aa7.28□□□□□ -1.24
POLR2J3-211ENST00000506060 RYR2Q92736 4967 aa7.28□□□□□ -1.24
POLR2J3-211ENST00000506060 C9orf153Q5TBE3 101 aa7.26□□□□□ -1.25
POLR2J3-211ENST00000506060 CDIP1Q9H305 208 aa7.26□□□□□ -1.25
POLR2J3-211ENST00000506060 DNAH5Q8TE73 4624 aa7.26□□□□□ -1.25
POLR2J3-211ENST00000506060 SPINK6Q6UWN8 80 aa7.25□□□□□ -1.25
POLR2J3-211ENST00000506060 LINC00643Q86TS7 51 aa7.25□□□□□ -1.25
POLR2J3-211ENST00000506060 Q8NBF4 154 aa7.25□□□□□ -1.25
POLR2J3-211ENST00000506060 IGLV9-49A0A0B4J1Y8 123 aa7.24□□□□□ -1.25
POLR2J3-211ENST00000506060 CDK2AP2O75956 126 aa7.24□□□□□ -1.25
POLR2J3-211ENST00000506060 FAM229BQ4G0N7 80 aa7.24□□□□□ -1.25
POLR2J3-211ENST00000506060 IGFL1Q6UW32 110 aa7.24□□□□□ -1.25
POLR2J3-211ENST00000506060 SIGMAR1Q99720 223 aa7.24□□□□□ -1.25
POLR2J3-211ENST00000506060 KMT2CQ8NEZ4 4911 aaKnown RBP7.24□□□□□ -1.25
POLR2J3-211ENST00000506060 FAM229AH3BQW9 127 aa7.23□□□□□ -1.25
POLR2J3-211ENST00000506060 PLA2G1BP04054 148 aaKnown RBP7.23□□□□□ -1.25
POLR2J3-211ENST00000506060 LINC00846Q9NV44 126 aa7.23□□□□□ -1.25
POLR2J3-211ENST00000506060 SMR3BP02814 79 aaPredicted RBP7.22□□□□□ -1.25
POLR2J3-211ENST00000506060 CRYGAP11844 174 aa7.22□□□□□ -1.25
POLR2J3-211ENST00000506060 DNAH8Q96JB1 4490 aa7.22□□□□□ -1.25
POLR2J3-211ENST00000506060 A0A1W2PNM2 257 aa7.21□□□□□ -1.26
POLR2J3-211ENST00000506060 ATP5EP2Q5VTU8 51 aa7.21□□□□□ -1.26
POLR2J3-211ENST00000506060 Q6Q795 121 aa7.21□□□□□ -1.26
POLR2J3-211ENST00000506060 MOBPQ13875 183 aa7.2□□□□□ -1.26
POLR2J3-211ENST00000506060 NREPQ16612 68 aa7.2□□□□□ -1.26
POLR2J3-211ENST00000506060 SSBP3-AS1Q7Z2R9 100 aa7.2□□□□□ -1.26
POLR2J3-211ENST00000506060 SRRM2Q9UQ35 2752 aaKnown RBP7.2□□□□□ -1.26
POLR2J3-211ENST00000506060 Q6ZVQ6 151 aa7.18□□□□□ -1.26
POLR2J3-211ENST00000506060 ANAPC11Q9NYG5 84 aa7.18□□□□□ -1.26
POLR2J3-211ENST00000506060 PKHD1P08F94 4074 aa7.18□□□□□ -1.26
POLR2J3-211ENST00000506060 TRBV7-7A0A0K0K1E9 115 aa7.17□□□□□ -1.26
POLR2J3-211ENST00000506060 IMUPQ9GZP8 106 aa7.16□□□□□ -1.26
POLR2J3-211ENST00000506060 SS18L2Q9UHA2 77 aa7.16□□□□□ -1.26
POLR2J3-211ENST00000506060 MT-ATP8P03928 68 aa7.15□□□□□ -1.26
POLR2J3-211ENST00000506060 CD164Q04900 197 aa7.15□□□□□ -1.26
POLR2J3-211ENST00000506060 A0A087WSZ3 146 aa7.14□□□□□ -1.27
POLR2J3-211ENST00000506060 LRP1BQ9NZR2 4599 aa7.13□□□□□ -1.27
POLR2J3-211ENST00000506060 DYNC1H1Q14204 4646 aaKnown RBP7.13□□□□□ -1.27
POLR2J3-211ENST00000506060 CXCL6P80162 114 aa7.13□□□□□ -1.27
POLR2J3-211ENST00000506060 A0A0G2JQZ4 141 aa7.12□□□□□ -1.27
POLR2J3-211ENST00000506060 BPY2O14599 106 aa7.12□□□□□ -1.27
POLR2J3-211ENST00000506060 KRTAP1-4P0C5Y4 121 aa7.12□□□□□ -1.27
POLR2J3-211ENST00000506060 IGKV3D-7A0A0C4DH55 119 aa7.11□□□□□ -1.27
POLR2J3-211ENST00000506060 C4orf48Q5BLP8 95 aa7.11□□□□□ -1.27
POLR2J3-211ENST00000506060 KRTAP10-4P60372 401 aaPredicted RBP7.1□□□□□ -1.27
POLR2J3-211ENST00000506060 Q5VSD8 79 aa7.1□□□□□ -1.27
POLR2J3-211ENST00000506060 TYMSOSQ8TAI1 123 aa7.1□□□□□ -1.27
POLR2J3-211ENST00000506060 A0A087X002 238 aa7.09□□□□□ -1.27
POLR2J3-211ENST00000506060 SCGB1A1P11684 91 aa7.09□□□□□ -1.27
POLR2J3-211ENST00000506060 KRTAP13-2Q52LG2 175 aa7.08□□□□□ -1.28
POLR2J3-211ENST00000506060 HRCT1Q6UXD1 115 aa7.08□□□□□ -1.28
POLR2J3-211ENST00000506060 J3KT08 172 aa7.07□□□□□ -1.28
POLR2J3-211ENST00000506060 HIST1H4AP62805 103 aaKnown RBP7.07□□□□□ -1.28
POLR2J3-211ENST00000506060 SPAG11AQ6PDA7 123 aa7.06□□□□□ -1.28
POLR2J3-211ENST00000506060 LIMD2Q9BT23 127 aa7.06□□□□□ -1.28
POLR2J3-211ENST00000506060 Q8N1X5 172 aa7.05□□□□□ -1.28
POLR2J3-211ENST00000506060 RYR3Q15413 4870 aa7.05□□□□□ -1.28
POLR2J3-211ENST00000506060 VPS13BQ7Z7G8 4022 aa7.04□□□□□ -1.28
POLR2J3-211ENST00000506060 APOBP04114 4563 aaKnown RBP7.03□□□□□ -1.28
POLR2J3-211ENST00000506060 SPINK1P00995 79 aa7.03□□□□□ -1.28
POLR2J3-211ENST00000506060 PRR26Q8N8Z3 221 aa7.03□□□□□ -1.28
POLR2J3-211ENST00000506060 NDUFB1O75438 58 aa7.02□□□□□ -1.29
POLR2J3-211ENST00000506060 ASB16-AS1Q495Z4 193 aa7.02□□□□□ -1.29
POLR2J3-211ENST00000506060 Q5XG85 94 aa7.02□□□□□ -1.29
POLR2J3-211ENST00000506060 LINC00472Q9H8W2 130 aa7.02□□□□□ -1.29
POLR2J3-211ENST00000506060 LINC00304Q8N9R0 145 aa7.01□□□□□ -1.29
POLR2J3-211ENST00000506060 RPS29P62273 56 aaKnown RBP7□□□□□ -1.29
POLR2J3-211ENST00000506060 IGKV4-1P06312 121 aa6.99□□□□□ -1.29
POLR2J3-211ENST00000506060 FAM236AA0A1B0GUQ0 79 aa6.98□□□□□ -1.29
POLR2J3-211ENST00000506060 FAM236BA0A1B0GV22 79 aa6.98□□□□□ -1.29
POLR2J3-211ENST00000506060 A8MWP4 228 aa6.98□□□□□ -1.29
POLR2J3-211ENST00000506060 DSCR10P59022 87 aa6.97□□□□□ -1.29
POLR2J3-211ENST00000506060 DEFB116Q30KQ4 102 aa6.97□□□□□ -1.29
POLR2J3-211ENST00000506060 A0A087WVE0 104 aa6.96□□□□□ -1.3
POLR2J3-211ENST00000506060 K7EQZ3 153 aa6.95□□□□□ -1.3
POLR2J3-211ENST00000506060 ATOX1O00244 68 aa6.95□□□□□ -1.3
POLR2J3-211ENST00000506060 PRR15Q8IV56 129 aa6.95□□□□□ -1.3
POLR2J3-211ENST00000506060 Q96NJ1 140 aa6.95□□□□□ -1.3
POLR2J3-211ENST00000506060 Q8N9L7 120 aa6.94□□□□□ -1.3
POLR2J3-211ENST00000506060 SMIM20Q8N5G0 67 aa6.93□□□□□ -1.3
POLR2J3-211ENST00000506060 ANAPC13Q9BS18 74 aa6.92□□□□□ -1.3
POLR2J3-211ENST00000506060 HCG22E2RYF7 251 aa6.91□□□□□ -1.3
POLR2J3-211ENST00000506060 C1orf195Q5TG92 126 aa6.91□□□□□ -1.3
POLR2J3-211ENST00000506060 FAT1Q14517 4588 aa6.9□□□□□ -1.3
POLR2J3-211ENST00000506060 A0A1B0GVX0 72 aa6.9□□□□□ -1.3
POLR2J3-211ENST00000506060 OXTP01178 125 aa6.89□□□□□ -1.31
POLR2J3-211ENST00000506060 KRTAP10-8P60410 259 aa6.89□□□□□ -1.31
POLR2J3-211ENST00000506060 HSPG2P98160 4391 aa6.88□□□□□ -1.31
POLR2J3-211ENST00000506060 IGHV6-1A0A0B4J1U7 121 aa6.88□□□□□ -1.31
POLR2J3-211ENST00000506060 C8orf87E5RJ46 101 aa6.88□□□□□ -1.31
POLR2J3-211ENST00000506060 PCP4P48539 62 aa6.87□□□□□ -1.31
POLR2J3-211ENST00000506060 CASC2Q6XLA1 102 aa6.87□□□□□ -1.31
POLR2J3-211ENST00000506060 RYR1P21817 5038 aa6.87□□□□□ -1.31
POLR2J3-211ENST00000506060 C8orf17Q9NRJ1 99 aa6.86□□□□□ -1.31
POLR2J3-211ENST00000506060 WFDC13Q8IUB5 93 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms