RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 STAB2Q8WWQ8 2551 aa4.8□□□□□ -1.64
PPARGC1A-204ENST00000506055 A0A0U1RQV1 116 aa4.8□□□□□ -1.64
PPARGC1A-204ENST00000506055 CHTF8P0CG12 524 aa4.8□□□□□ -1.64
PPARGC1A-204ENST00000506055 IGFL1Q6UW32 110 aa4.8□□□□□ -1.64
PPARGC1A-204ENST00000506055 CNBPP62633 177 aaKnown RBP4.79□□□□□ -1.64
PPARGC1A-204ENST00000506055 DNAH7Q8WXX0 4024 aa4.79□□□□□ -1.64
PPARGC1A-204ENST00000506055 PHF5AQ7RTV0 110 aaKnown RBP4.78□□□□□ -1.64
PPARGC1A-204ENST00000506055 A0A087WSZ3 146 aa4.78□□□□□ -1.64
PPARGC1A-204ENST00000506055 KRTAP11-1Q8IUC1 163 aa4.78□□□□□ -1.64
PPARGC1A-204ENST00000506055 DNAH9Q9NYC9 4486 aa4.78□□□□□ -1.64
PPARGC1A-204ENST00000506055 UBE2AP49459 152 aa4.77□□□□□ -1.65
PPARGC1A-204ENST00000506055 LINC00474Q9P2X8 69 aa4.77□□□□□ -1.65
PPARGC1A-204ENST00000506055 ATP5EP56381 51 aaPredicted RBP4.76□□□□□ -1.65
PPARGC1A-204ENST00000506055 APLNQ9ULZ1 77 aa4.76□□□□□ -1.65
PPARGC1A-204ENST00000506055 SMIM26A0A096LP01 95 aa4.76□□□□□ -1.65
PPARGC1A-204ENST00000506055 HCG22E2RYF7 251 aa4.76□□□□□ -1.65
PPARGC1A-204ENST00000506055 RPL37AP61513 92 aaKnown RBP4.76□□□□□ -1.65
PPARGC1A-204ENST00000506055 FP248Q71RG6 208 aaPredicted RBP4.76□□□□□ -1.65
PPARGC1A-204ENST00000506055 C14orf177Q52M58 125 aa4.75□□□□□ -1.65
PPARGC1A-204ENST00000506055 WFDC13Q8IUB5 93 aa4.75□□□□□ -1.65
PPARGC1A-204ENST00000506055 IGLV8-61A0A075B6I0 122 aa4.74□□□□□ -1.65
PPARGC1A-204ENST00000506055 FAM229BQ4G0N7 80 aa4.74□□□□□ -1.65
PPARGC1A-204ENST00000506055 C9orf163Q8N9P6 203 aa4.73□□□□□ -1.65
PPARGC1A-204ENST00000506055 DNHD1Q96M86 4753 aa4.73□□□□□ -1.65
PPARGC1A-204ENST00000506055 LCE6AA0A183 80 aa4.73□□□□□ -1.65
PPARGC1A-204ENST00000506055 PANO1I0J062 215 aa4.72□□□□□ -1.65
PPARGC1A-204ENST00000506055 MPLKIPQ8TAP9 179 aa4.72□□□□□ -1.65
PPARGC1A-204ENST00000506055 LRCOL1A6NCL2 159 aa4.72□□□□□ -1.65
PPARGC1A-204ENST00000506055 NBDYA0A0U1RRE5 68 aa4.71□□□□□ -1.66
PPARGC1A-204ENST00000506055 MDFIQ99750 246 aa4.71□□□□□ -1.66
PPARGC1A-204ENST00000506055 B9D2Q9BPU9 175 aa4.71□□□□□ -1.66
PPARGC1A-204ENST00000506055 H0Y9J4 135 aa4.71□□□□□ -1.66
PPARGC1A-204ENST00000506055 LINC00336Q6ZUF6 198 aa4.7□□□□□ -1.66
PPARGC1A-204ENST00000506055 PRR4Q16378 134 aa4.7□□□□□ -1.66
PPARGC1A-204ENST00000506055 ZCCHC13Q8WW36 166 aaKnown RBP4.7□□□□□ -1.66
PPARGC1A-204ENST00000506055 LOC100996750A0A140TA64 210 aa4.69□□□□□ -1.66
PPARGC1A-204ENST00000506055 SPRR1BP22528 89 aa4.69□□□□□ -1.66
PPARGC1A-204ENST00000506055 KRTAP4-6Q9BYQ5 205 aa4.69□□□□□ -1.66
PPARGC1A-204ENST00000506055 CASC2Q6XLA1 102 aa4.68□□□□□ -1.66
PPARGC1A-204ENST00000506055 IGLV9-49A0A0B4J1Y8 123 aa4.68□□□□□ -1.66
PPARGC1A-204ENST00000506055 Q6ZRN7 208 aaPredicted RBP4.68□□□□□ -1.66
PPARGC1A-204ENST00000506055 PRR15Q8IV56 129 aa4.68□□□□□ -1.66
PPARGC1A-204ENST00000506055 C1orf64Q8NEQ6 169 aa4.68□□□□□ -1.66
PPARGC1A-204ENST00000506055 LINC00472Q9H8W2 130 aa4.68□□□□□ -1.66
PPARGC1A-204ENST00000506055 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.68□□□□□ -1.66
PPARGC1A-204ENST00000506055 MP68P56378 58 aa4.67□□□□□ -1.66
PPARGC1A-204ENST00000506055 LINC00208Q96KT6 92 aa4.67□□□□□ -1.66
PPARGC1A-204ENST00000506055 A8MWP4 228 aa4.67□□□□□ -1.66
PPARGC1A-204ENST00000506055 KRTAP29-1A8MX34 341 aaPredicted RBP4.67□□□□□ -1.66
PPARGC1A-204ENST00000506055 hDV103S1A0JD37 113 aa4.66□□□□□ -1.66
PPARGC1A-204ENST00000506055 NUPR2A6NF83 97 aa4.66□□□□□ -1.66
PPARGC1A-204ENST00000506055 PLECQ15149 4684 aaKnown RBP4.66□□□□□ -1.66
PPARGC1A-204ENST00000506055 PKIGQ9Y2B9 76 aa4.66□□□□□ -1.66
PPARGC1A-204ENST00000506055 KRTAP13-1Q8IUC0 172 aa4.65□□□□□ -1.66
PPARGC1A-204ENST00000506055 SPACA4Q8TDM5 124 aa4.65□□□□□ -1.67
PPARGC1A-204ENST00000506055 H0Y9P7 68 aa4.64□□□□□ -1.67
PPARGC1A-204ENST00000506055 NDUFB1O75438 58 aa4.64□□□□□ -1.67
PPARGC1A-204ENST00000506055 TRAV22A0A0B4J277 110 aa4.64□□□□□ -1.67
PPARGC1A-204ENST00000506055 LCE2BO14633 110 aa4.64□□□□□ -1.67
PPARGC1A-204ENST00000506055 BRK1Q8WUW1 75 aa4.64□□□□□ -1.67
PPARGC1A-204ENST00000506055 PRO0628Q9UI54 55 aa4.64□□□□□ -1.67
PPARGC1A-204ENST00000506055 DYNC2H1Q8NCM8 4307 aaKnown RBP4.64□□□□□ -1.67
PPARGC1A-204ENST00000506055 A0A087WTM6 91 aa4.62□□□□□ -1.67
PPARGC1A-204ENST00000506055 ANAPC11Q9NYG5 84 aa4.62□□□□□ -1.67
PPARGC1A-204ENST00000506055 STARD9Q9P2P6 4700 aa4.61□□□□□ -1.67
PPARGC1A-204ENST00000506055 MMP24-AS1A0A0U1RRL7 71 aa4.61□□□□□ -1.67
PPARGC1A-204ENST00000506055 CYP4F30PQ9H0H9 118 aa4.61□□□□□ -1.67
PPARGC1A-204ENST00000506055 PSORS1C2Q9UIG4 136 aa4.61□□□□□ -1.67
PPARGC1A-204ENST00000506055 RTL8CO15255 209 aa4.6□□□□□ -1.67
PPARGC1A-204ENST00000506055 FRAS1Q86XX4 4008 aa4.6□□□□□ -1.67
PPARGC1A-204ENST00000506055 MOBPQ13875 183 aa4.6□□□□□ -1.67
PPARGC1A-204ENST00000506055 Q96NJ1 140 aa4.6□□□□□ -1.67
PPARGC1A-204ENST00000506055 FBN3Q75N90 2809 aa4.59□□□□□ -1.67
PPARGC1A-204ENST00000506055 KMT2AQ03164 3969 aa4.59□□□□□ -1.67
PPARGC1A-204ENST00000506055 PSPHP1O15172 72 aa4.59□□□□□ -1.67
PPARGC1A-204ENST00000506055 LINC00483Q53H64 154 aa4.59□□□□□ -1.67
PPARGC1A-204ENST00000506055 HECTD4Q9Y4D8 3996 aa4.59□□□□□ -1.67
PPARGC1A-204ENST00000506055 IGLV5-52A0A0A0MRZ9 124 aa4.59□□□□□ -1.68
PPARGC1A-204ENST00000506055 IGHV6-1A0A0B4J1U7 121 aa4.59□□□□□ -1.68
PPARGC1A-204ENST00000506055 H3BPC8 53 aa4.59□□□□□ -1.68
PPARGC1A-204ENST00000506055 Q1T7F1 81 aa4.59□□□□□ -1.68
PPARGC1A-204ENST00000506055 WWC2-AS2Q96NR7 200 aa4.58□□□□□ -1.68
PPARGC1A-204ENST00000506055 MEGF8Q7Z7M0 2845 aa4.58□□□□□ -1.68
PPARGC1A-204ENST00000506055 TGP01266 2768 aa4.58□□□□□ -1.68
PPARGC1A-204ENST00000506055 ZNF706Q9Y5V0 76 aaPredicted RBP4.58□□□□□ -1.68
PPARGC1A-204ENST00000506055 NDUFS5O43920 106 aa4.57□□□□□ -1.68
PPARGC1A-204ENST00000506055 ZNF861PO60384 105 aa4.57□□□□□ -1.68
PPARGC1A-204ENST00000506055 PRKDCP78527 4128 aaKnown RBP4.57□□□□□ -1.68
PPARGC1A-204ENST00000506055 CDK2AP2O75956 126 aa4.56□□□□□ -1.68
PPARGC1A-204ENST00000506055 SPANXA2-OT1Q8N9U9 137 aa4.56□□□□□ -1.68
PPARGC1A-204ENST00000506055 C8orf17Q9NRJ1 99 aa4.56□□□□□ -1.68
PPARGC1A-204ENST00000506055 PCOTHQ58A44 107 aa4.56□□□□□ -1.68
PPARGC1A-204ENST00000506055 PLAC8Q9NZF1 115 aa4.56□□□□□ -1.68
PPARGC1A-204ENST00000506055 A0A1B0GVX0 72 aa4.55□□□□□ -1.68
PPARGC1A-204ENST00000506055 Q6ZR54 194 aa4.55□□□□□ -1.68
PPARGC1A-204ENST00000506055 A0A087X002 238 aa4.54□□□□□ -1.68
PPARGC1A-204ENST00000506055 NOTCH2NLQ7Z3S9 236 aa4.54□□□□□ -1.68
PPARGC1A-204ENST00000506055 TP53AIP1Q9HCN2 124 aa4.54□□□□□ -1.68
PPARGC1A-204ENST00000506055 VPS13DQ5THJ4 4388 aa4.54□□□□□ -1.68
PPARGC1A-204ENST00000506055 DNAH2Q9P225 4427 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms