RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 STAB2Q8WWQ8 2551 aa4.8□□□□□ -1.64
PPARGC1A-204ENST00000506055 A0A0U1RQV1 116 aa4.8□□□□□ -1.64
PPARGC1A-204ENST00000506055 CHTF8P0CG12 524 aa4.8□□□□□ -1.64
PPARGC1A-204ENST00000506055 IGFL1Q6UW32 110 aa4.8□□□□□ -1.64
PPARGC1A-204ENST00000506055 CNBPP62633 177 aaKnown RBP4.79□□□□□ -1.64
PPARGC1A-204ENST00000506055 DNAH7Q8WXX0 4024 aa4.79□□□□□ -1.64
PPARGC1A-204ENST00000506055 PHF5AQ7RTV0 110 aaKnown RBP4.78□□□□□ -1.64
PPARGC1A-204ENST00000506055 A0A087WSZ3 146 aa4.78□□□□□ -1.64
PPARGC1A-204ENST00000506055 KRTAP11-1Q8IUC1 163 aa4.78□□□□□ -1.64
PPARGC1A-204ENST00000506055 DNAH9Q9NYC9 4486 aa4.78□□□□□ -1.64
PPARGC1A-204ENST00000506055 UBE2AP49459 152 aa4.77□□□□□ -1.65
PPARGC1A-204ENST00000506055 LINC00474Q9P2X8 69 aa4.77□□□□□ -1.65
PPARGC1A-204ENST00000506055 ATP5EP56381 51 aaPredicted RBP4.76□□□□□ -1.65
PPARGC1A-204ENST00000506055 APLNQ9ULZ1 77 aa4.76□□□□□ -1.65
PPARGC1A-204ENST00000506055 SMIM26A0A096LP01 95 aa4.76□□□□□ -1.65
PPARGC1A-204ENST00000506055 HCG22E2RYF7 251 aa4.76□□□□□ -1.65
PPARGC1A-204ENST00000506055 RPL37AP61513 92 aaKnown RBP4.76□□□□□ -1.65
PPARGC1A-204ENST00000506055 FP248Q71RG6 208 aaPredicted RBP4.76□□□□□ -1.65
PPARGC1A-204ENST00000506055 C14orf177Q52M58 125 aa4.75□□□□□ -1.65
PPARGC1A-204ENST00000506055 WFDC13Q8IUB5 93 aa4.75□□□□□ -1.65
PPARGC1A-204ENST00000506055 IGLV8-61A0A075B6I0 122 aa4.74□□□□□ -1.65
PPARGC1A-204ENST00000506055 FAM229BQ4G0N7 80 aa4.74□□□□□ -1.65
PPARGC1A-204ENST00000506055 C9orf163Q8N9P6 203 aa4.73□□□□□ -1.65
PPARGC1A-204ENST00000506055 DNHD1Q96M86 4753 aa4.73□□□□□ -1.65
PPARGC1A-204ENST00000506055 LCE6AA0A183 80 aa4.73□□□□□ -1.65
PPARGC1A-204ENST00000506055 PANO1I0J062 215 aa4.72□□□□□ -1.65
PPARGC1A-204ENST00000506055 MPLKIPQ8TAP9 179 aa4.72□□□□□ -1.65
PPARGC1A-204ENST00000506055 LRCOL1A6NCL2 159 aa4.72□□□□□ -1.65
PPARGC1A-204ENST00000506055 NBDYA0A0U1RRE5 68 aa4.71□□□□□ -1.66
PPARGC1A-204ENST00000506055 MDFIQ99750 246 aa4.71□□□□□ -1.66
PPARGC1A-204ENST00000506055 B9D2Q9BPU9 175 aa4.71□□□□□ -1.66
PPARGC1A-204ENST00000506055 H0Y9J4 135 aa4.71□□□□□ -1.66
PPARGC1A-204ENST00000506055 LINC00336Q6ZUF6 198 aa4.7□□□□□ -1.66
PPARGC1A-204ENST00000506055 PRR4Q16378 134 aa4.7□□□□□ -1.66
PPARGC1A-204ENST00000506055 ZCCHC13Q8WW36 166 aaKnown RBP4.7□□□□□ -1.66
PPARGC1A-204ENST00000506055 LOC100996750A0A140TA64 210 aa4.69□□□□□ -1.66
PPARGC1A-204ENST00000506055 SPRR1BP22528 89 aa4.69□□□□□ -1.66
PPARGC1A-204ENST00000506055 KRTAP4-6Q9BYQ5 205 aa4.69□□□□□ -1.66
PPARGC1A-204ENST00000506055 CASC2Q6XLA1 102 aa4.68□□□□□ -1.66
PPARGC1A-204ENST00000506055 IGLV9-49A0A0B4J1Y8 123 aa4.68□□□□□ -1.66
PPARGC1A-204ENST00000506055 Q6ZRN7 208 aaPredicted RBP4.68□□□□□ -1.66
PPARGC1A-204ENST00000506055 PRR15Q8IV56 129 aa4.68□□□□□ -1.66
PPARGC1A-204ENST00000506055 C1orf64Q8NEQ6 169 aa4.68□□□□□ -1.66
PPARGC1A-204ENST00000506055 LINC00472Q9H8W2 130 aa4.68□□□□□ -1.66
PPARGC1A-204ENST00000506055 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.68□□□□□ -1.66
PPARGC1A-204ENST00000506055 MP68P56378 58 aa4.67□□□□□ -1.66
PPARGC1A-204ENST00000506055 LINC00208Q96KT6 92 aa4.67□□□□□ -1.66
PPARGC1A-204ENST00000506055 A8MWP4 228 aa4.67□□□□□ -1.66
PPARGC1A-204ENST00000506055 KRTAP29-1A8MX34 341 aaPredicted RBP4.67□□□□□ -1.66
PPARGC1A-204ENST00000506055 hDV103S1A0JD37 113 aa4.66□□□□□ -1.66
PPARGC1A-204ENST00000506055 NUPR2A6NF83 97 aa4.66□□□□□ -1.66
PPARGC1A-204ENST00000506055 PLECQ15149 4684 aaKnown RBP4.66□□□□□ -1.66
PPARGC1A-204ENST00000506055 PKIGQ9Y2B9 76 aa4.66□□□□□ -1.66
PPARGC1A-204ENST00000506055 KRTAP13-1Q8IUC0 172 aa4.65□□□□□ -1.66
PPARGC1A-204ENST00000506055 SPACA4Q8TDM5 124 aa4.65□□□□□ -1.67
PPARGC1A-204ENST00000506055 H0Y9P7 68 aa4.64□□□□□ -1.67
PPARGC1A-204ENST00000506055 NDUFB1O75438 58 aa4.64□□□□□ -1.67
PPARGC1A-204ENST00000506055 TRAV22A0A0B4J277 110 aa4.64□□□□□ -1.67
PPARGC1A-204ENST00000506055 LCE2BO14633 110 aa4.64□□□□□ -1.67
PPARGC1A-204ENST00000506055 BRK1Q8WUW1 75 aa4.64□□□□□ -1.67
PPARGC1A-204ENST00000506055 PRO0628Q9UI54 55 aa4.64□□□□□ -1.67
PPARGC1A-204ENST00000506055 DYNC2H1Q8NCM8 4307 aaKnown RBP4.64□□□□□ -1.67
PPARGC1A-204ENST00000506055 A0A087WTM6 91 aa4.62□□□□□ -1.67
PPARGC1A-204ENST00000506055 ANAPC11Q9NYG5 84 aa4.62□□□□□ -1.67
PPARGC1A-204ENST00000506055 STARD9Q9P2P6 4700 aa4.61□□□□□ -1.67
PPARGC1A-204ENST00000506055 MMP24-AS1A0A0U1RRL7 71 aa4.61□□□□□ -1.67
PPARGC1A-204ENST00000506055 CYP4F30PQ9H0H9 118 aa4.61□□□□□ -1.67
PPARGC1A-204ENST00000506055 PSORS1C2Q9UIG4 136 aa4.61□□□□□ -1.67
PPARGC1A-204ENST00000506055 RTL8CO15255 209 aa4.6□□□□□ -1.67
PPARGC1A-204ENST00000506055 FRAS1Q86XX4 4008 aa4.6□□□□□ -1.67
PPARGC1A-204ENST00000506055 MOBPQ13875 183 aa4.6□□□□□ -1.67
PPARGC1A-204ENST00000506055 Q96NJ1 140 aa4.6□□□□□ -1.67
PPARGC1A-204ENST00000506055 FBN3Q75N90 2809 aa4.59□□□□□ -1.67
PPARGC1A-204ENST00000506055 KMT2AQ03164 3969 aa4.59□□□□□ -1.67
PPARGC1A-204ENST00000506055 PSPHP1O15172 72 aa4.59□□□□□ -1.67
PPARGC1A-204ENST00000506055 LINC00483Q53H64 154 aa4.59□□□□□ -1.67
PPARGC1A-204ENST00000506055 HECTD4Q9Y4D8 3996 aa4.59□□□□□ -1.67
PPARGC1A-204ENST00000506055 IGLV5-52A0A0A0MRZ9 124 aa4.59□□□□□ -1.68
PPARGC1A-204ENST00000506055 IGHV6-1A0A0B4J1U7 121 aa4.59□□□□□ -1.68
PPARGC1A-204ENST00000506055 H3BPC8 53 aa4.59□□□□□ -1.68
PPARGC1A-204ENST00000506055 Q1T7F1 81 aa4.59□□□□□ -1.68
PPARGC1A-204ENST00000506055 WWC2-AS2Q96NR7 200 aa4.58□□□□□ -1.68
PPARGC1A-204ENST00000506055 MEGF8Q7Z7M0 2845 aa4.58□□□□□ -1.68
PPARGC1A-204ENST00000506055 TGP01266 2768 aa4.58□□□□□ -1.68
PPARGC1A-204ENST00000506055 ZNF706Q9Y5V0 76 aaPredicted RBP4.58□□□□□ -1.68
PPARGC1A-204ENST00000506055 NDUFS5O43920 106 aa4.57□□□□□ -1.68
PPARGC1A-204ENST00000506055 ZNF861PO60384 105 aa4.57□□□□□ -1.68
PPARGC1A-204ENST00000506055 PRKDCP78527 4128 aaKnown RBP4.57□□□□□ -1.68
PPARGC1A-204ENST00000506055 CDK2AP2O75956 126 aa4.56□□□□□ -1.68
PPARGC1A-204ENST00000506055 SPANXA2-OT1Q8N9U9 137 aa4.56□□□□□ -1.68
PPARGC1A-204ENST00000506055 C8orf17Q9NRJ1 99 aa4.56□□□□□ -1.68
PPARGC1A-204ENST00000506055 PCOTHQ58A44 107 aa4.56□□□□□ -1.68
PPARGC1A-204ENST00000506055 PLAC8Q9NZF1 115 aa4.56□□□□□ -1.68
PPARGC1A-204ENST00000506055 A0A1B0GVX0 72 aa4.55□□□□□ -1.68
PPARGC1A-204ENST00000506055 Q6ZR54 194 aa4.55□□□□□ -1.68
PPARGC1A-204ENST00000506055 A0A087X002 238 aa4.54□□□□□ -1.68
PPARGC1A-204ENST00000506055 NOTCH2NLQ7Z3S9 236 aa4.54□□□□□ -1.68
PPARGC1A-204ENST00000506055 TP53AIP1Q9HCN2 124 aa4.54□□□□□ -1.68
PPARGC1A-204ENST00000506055 VPS13DQ5THJ4 4388 aa4.54□□□□□ -1.68
PPARGC1A-204ENST00000506055 DNAH2Q9P225 4427 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms