RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 SEC11AP67812 179 aa3.58□□□□□ -1.84
VCAN-206ENST00000505615 LYRM7Q5U5X0 104 aa3.58□□□□□ -1.84
VCAN-206ENST00000505615 TOMM6Q96B49 74 aa3.57□□□□□ -1.84
VCAN-206ENST00000505615 C8orf17Q9NRJ1 99 aa3.57□□□□□ -1.84
VCAN-206ENST00000505615 NAT8BQ9UHF3 227 aa3.57□□□□□ -1.84
VCAN-206ENST00000505615 HMSDA8MTL9 139 aa3.56□□□□□ -1.84
VCAN-206ENST00000505615 C9JAW5 83 aa3.56□□□□□ -1.84
VCAN-206ENST00000505615 SPINK8P0C7L1 97 aa3.56□□□□□ -1.84
VCAN-206ENST00000505615 KCNQ1DNQ9H478 68 aa3.56□□□□□ -1.84
VCAN-206ENST00000505615 SMIM27A0A1W2PRY6 76 aa3.55□□□□□ -1.84
VCAN-206ENST00000505615 KRTAP9-6A8MVA2 160 aa3.55□□□□□ -1.84
VCAN-206ENST00000505615 BPY2O14599 106 aa3.55□□□□□ -1.84
VCAN-206ENST00000505615 SRP19P09132 144 aaKnown RBP3.55□□□□□ -1.84
VCAN-206ENST00000505615 KRTAP10-10P60014 251 aa3.55□□□□□ -1.84
VCAN-206ENST00000505615 C9orf153Q5TBE3 101 aa3.55□□□□□ -1.84
VCAN-206ENST00000505615 HRCT1Q6UXD1 115 aa3.55□□□□□ -1.84
VCAN-206ENST00000505615 TCTE3Q8IZS6 198 aa3.55□□□□□ -1.84
VCAN-206ENST00000505615 PRELID3AQ96N28 172 aa3.55□□□□□ -1.84
VCAN-206ENST00000505615 LIMD2Q9BT23 127 aa3.55□□□□□ -1.84
VCAN-206ENST00000505615 ERG28Q9UKR5 140 aa3.55□□□□□ -1.84
VCAN-206ENST00000505615 ETDCA0A1B0GVM5 59 aa3.54□□□□□ -1.84
VCAN-206ENST00000505615 A0A1B0GW54 56 aa3.54□□□□□ -1.84
VCAN-206ENST00000505615 SMIM7Q9BQ49 75 aa3.54□□□□□ -1.84
VCAN-206ENST00000505615 Q9BRP9 147 aa3.54□□□□□ -1.84
VCAN-206ENST00000505615 A0A1B0GVX0 72 aa3.53□□□□□ -1.84
VCAN-206ENST00000505615 NDUFAF8A1L188 74 aa3.53□□□□□ -1.84
VCAN-206ENST00000505615 S100A8P05109 93 aa3.53□□□□□ -1.84
VCAN-206ENST00000505615 LUZP6Q538Z0 58 aa3.53□□□□□ -1.84
VCAN-206ENST00000505615 MRPL54Q6P161 138 aaKnown RBP3.53□□□□□ -1.84
VCAN-206ENST00000505615 TMEM136Q6ZRR5 245 aa3.53□□□□□ -1.84
VCAN-206ENST00000505615 KTN1-AS1Q86SY8 53 aa3.53□□□□□ -1.84
VCAN-206ENST00000505615 CEND1Q8N111 149 aa3.53□□□□□ -1.84
VCAN-206ENST00000505615 Q8N8P6 123 aa3.53□□□□□ -1.84
VCAN-206ENST00000505615 J3QR89 54 aa3.52□□□□□ -1.85
VCAN-206ENST00000505615 DPM2O94777 84 aa3.52□□□□□ -1.85
VCAN-206ENST00000505615 COX17Q14061 63 aa3.52□□□□□ -1.85
VCAN-206ENST00000505615 SLC25A34Q6PIV7 304 aa3.52□□□□□ -1.85
VCAN-206ENST00000505615 PCP2Q8IVA1 136 aa3.52□□□□□ -1.85
VCAN-206ENST00000505615 C14orf144Q96I85 54 aa3.52□□□□□ -1.85
VCAN-206ENST00000505615 K7ERS5 55 aa3.51□□□□□ -1.85
VCAN-206ENST00000505615 NCR3O14931 201 aa3.51□□□□□ -1.85
VCAN-206ENST00000505615 HIST1H2BOP23527 126 aa3.51□□□□□ -1.85
VCAN-206ENST00000505615 HIST1H2BBP33778 126 aa3.51□□□□□ -1.85
VCAN-206ENST00000505615 HIST1H2BDP58876 126 aa3.51□□□□□ -1.85
VCAN-206ENST00000505615 HIST1H2BCP62807 126 aa3.51□□□□□ -1.85
VCAN-206ENST00000505615 HIST2H2BEQ16778 126 aa3.51□□□□□ -1.85
VCAN-206ENST00000505615 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.51□□□□□ -1.85
VCAN-206ENST00000505615 LCA10Q71F78 164 aa3.51□□□□□ -1.85
VCAN-206ENST00000505615 HIST1H2BHQ93079 126 aa3.51□□□□□ -1.85
VCAN-206ENST00000505615 ZNF625Q96I27 306 aaPredicted RBP3.51□□□□□ -1.85
VCAN-206ENST00000505615 HIST1H2BNQ99877 126 aa3.51□□□□□ -1.85
VCAN-206ENST00000505615 HIST1H2BMQ99879 126 aa3.51□□□□□ -1.85
VCAN-206ENST00000505615 TRBV10-3A0A0K0K1G6 114 aa3.5□□□□□ -1.85
VCAN-206ENST00000505615 C20orf202A1L168 122 aa3.5□□□□□ -1.85
VCAN-206ENST00000505615 ZNF73O43830 326 aaPredicted RBP3.5□□□□□ -1.85
VCAN-206ENST00000505615 TRGC2P03986 189 aa3.5□□□□□ -1.85
VCAN-206ENST00000505615 ADCYAP1P18509 176 aa3.5□□□□□ -1.85
VCAN-206ENST00000505615 PRR15Q8IV56 129 aa3.5□□□□□ -1.85
VCAN-206ENST00000505615 K7EMI3 77 aa3.49□□□□□ -1.85
VCAN-206ENST00000505615 Q6ZRX8 168 aa3.49□□□□□ -1.85
VCAN-206ENST00000505615 NAT8Q9UHE5 227 aa3.49□□□□□ -1.85
VCAN-206ENST00000505615 J3QQQ9 107 aa3.48□□□□□ -1.85
VCAN-206ENST00000505615 TAX1BP3O14907 124 aa3.48□□□□□ -1.85
VCAN-206ENST00000505615 OCIAD2Q56VL3 154 aa3.48□□□□□ -1.85
VCAN-206ENST00000505615 Q5XG85 94 aa3.48□□□□□ -1.85
VCAN-206ENST00000505615 ST20-AS1Q8NBB2 130 aa3.48□□□□□ -1.85
VCAN-206ENST00000505615 CST9LQ9H4G1 147 aa3.48□□□□□ -1.85
VCAN-206ENST00000505615 KMT2DO14686 5537 aa3.48□□□□□ -1.85
VCAN-206ENST00000505615 TMEM223A0PJW6 202 aa3.47□□□□□ -1.85
VCAN-206ENST00000505615 H3BRM9 83 aa3.47□□□□□ -1.85
VCAN-206ENST00000505615 ZNF22P17026 224 aaPredicted RBP3.47□□□□□ -1.85
VCAN-206ENST00000505615 NDUFA6P56556 154 aa3.47□□□□□ -1.85
VCAN-206ENST00000505615 ADIRFQ15847 76 aa3.47□□□□□ -1.85
VCAN-206ENST00000505615 SCGB3A1Q96QR1 104 aa3.47□□□□□ -1.85
VCAN-206ENST00000505615 MDN1Q9NU22 5596 aa3.46□□□□□ -1.85
VCAN-206ENST00000505615 IGLC3P0DOY3 106 aa3.46□□□□□ -1.86
VCAN-206ENST00000505615 SPRR1BP22528 89 aa3.46□□□□□ -1.86
VCAN-206ENST00000505615 NXT2Q9NPJ8 142 aaKnown RBP3.46□□□□□ -1.86
VCAN-206ENST00000505615 H7C2G1 150 aa3.45□□□□□ -1.86
VCAN-206ENST00000505615 LGALS3P17931 250 aaKnown RBP3.45□□□□□ -1.86
VCAN-206ENST00000505615 LINC00158P58513 81 aa3.45□□□□□ -1.86
VCAN-206ENST00000505615 ALKAL2Q6UX46 152 aa3.45□□□□□ -1.86
VCAN-206ENST00000505615 ATP11AUNQ6ZP68 121 aa3.44□□□□□ -1.86
VCAN-206ENST00000505615 TRBV7-6A0A0J9YX20 115 aa3.43□□□□□ -1.86
VCAN-206ENST00000505615 MT-ND4LP03901 98 aa3.43□□□□□ -1.86
VCAN-206ENST00000505615 SMIM13P0DJ93 91 aa3.43□□□□□ -1.86
VCAN-206ENST00000505615 FABP2P12104 132 aa3.43□□□□□ -1.86
VCAN-206ENST00000505615 AKR1D1P51857 326 aa3.43□□□□□ -1.86
VCAN-206ENST00000505615 TSPEAR-AS2P59090 65 aa3.43□□□□□ -1.86
VCAN-206ENST00000505615 HIST1H4AP62805 103 aaKnown RBP3.43□□□□□ -1.86
VCAN-206ENST00000505615 SFTA2Q6UW10 78 aa3.43□□□□□ -1.86
VCAN-206ENST00000505615 C20orf166-AS1Q96NR2 134 aa3.43□□□□□ -1.86
VCAN-206ENST00000505615 OBSCNQ5VST9 7968 aa3.43□□□□□ -1.86
VCAN-206ENST00000505615 KRTAP2-3P0C7H8 128 aa3.42□□□□□ -1.86
VCAN-206ENST00000505615 MIR7-3HGQ8N6C7 128 aa3.42□□□□□ -1.86
VCAN-206ENST00000505615 KRTAP2-4Q9BYR9 128 aa3.42□□□□□ -1.86
VCAN-206ENST00000505615 A6NED7 52 aa3.41□□□□□ -1.86
VCAN-206ENST00000505615 LINC01546A6NGU7 62 aa3.41□□□□□ -1.86
VCAN-206ENST00000505615 C11orf86A6NJI1 115 aa3.41□□□□□ -1.86
VCAN-206ENST00000505615 LINC01554Q52M75 96 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms