RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 CRYGAP11844 174 aa6.1□□□□□ -1.43
COL1A1-210ENST00000504289 UBE2AP49459 152 aa6.1□□□□□ -1.43
COL1A1-210ENST00000504289 KRTAP13-1Q8IUC0 172 aa6.1□□□□□ -1.43
COL1A1-210ENST00000504289 DPH3Q96FX2 82 aa6.1□□□□□ -1.43
COL1A1-210ENST00000504289 HIGD2AQ9BW72 106 aa6.1□□□□□ -1.43
COL1A1-210ENST00000504289 A0A1W2PNM2 257 aa6.09□□□□□ -1.43
COL1A1-210ENST00000504289 COX7CP15954 63 aa6.09□□□□□ -1.43
COL1A1-210ENST00000504289 PRLHP81277 87 aa6.09□□□□□ -1.43
COL1A1-210ENST00000504289 C9orf153Q5TBE3 101 aa6.09□□□□□ -1.43
COL1A1-210ENST00000504289 SERP2Q8N6R1 65 aa6.09□□□□□ -1.43
COL1A1-210ENST00000504289 LINC00476Q8WZB0 136 aa6.09□□□□□ -1.43
COL1A1-210ENST00000504289 RPL37AP61513 92 aaKnown RBP6.08□□□□□ -1.44
COL1A1-210ENST00000504289 DNAH17Q9UFH2 4485 aa6.07□□□□□ -1.44
COL1A1-210ENST00000504289 A0A087WVE0 104 aa6.07□□□□□ -1.44
COL1A1-210ENST00000504289 IGLV5-52A0A0A0MRZ9 124 aa6.07□□□□□ -1.44
COL1A1-210ENST00000504289 BPY2O14599 106 aa6.07□□□□□ -1.44
COL1A1-210ENST00000504289 KRTAP11-1Q8IUC1 163 aa6.07□□□□□ -1.44
COL1A1-210ENST00000504289 ZNF706Q9Y5V0 76 aaPredicted RBP6.07□□□□□ -1.44
COL1A1-210ENST00000504289 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.07□□□□□ -1.44
COL1A1-210ENST00000504289 PANO1I0J062 215 aa6.06□□□□□ -1.44
COL1A1-210ENST00000504289 LY6G6CO95867 125 aa6.06□□□□□ -1.44
COL1A1-210ENST00000504289 DNAH2Q9P225 4427 aa6.05□□□□□ -1.44
COL1A1-210ENST00000504289 ALMS1Q8TCU4 4167 aa6.04□□□□□ -1.44
COL1A1-210ENST00000504289 IGFL1Q6UW32 110 aa6.04□□□□□ -1.44
COL1A1-210ENST00000504289 TRAV7A0A075B6U4 112 aa6.03□□□□□ -1.44
COL1A1-210ENST00000504289 TMEM258P61165 79 aa6.03□□□□□ -1.44
COL1A1-210ENST00000504289 LINC00483Q53H64 154 aa6.03□□□□□ -1.44
COL1A1-210ENST00000504289 HECTD4Q9Y4D8 3996 aa6.03□□□□□ -1.44
COL1A1-210ENST00000504289 IGKV4-1P06312 121 aa6.01□□□□□ -1.45
COL1A1-210ENST00000504289 ZNF861PO60384 105 aa6□□□□□ -1.45
COL1A1-210ENST00000504289 PSORS1C2Q9UIG4 136 aa6□□□□□ -1.45
COL1A1-210ENST00000504289 SCXQ7RTU7 201 aa5.98□□□□□ -1.45
COL1A1-210ENST00000504289 KMT2AQ03164 3969 aa5.98□□□□□ -1.45
COL1A1-210ENST00000504289 Q6ZSA8 131 aa5.97□□□□□ -1.45
COL1A1-210ENST00000504289 A0A087WSZ3 146 aa5.95□□□□□ -1.46
COL1A1-210ENST00000504289 IGLV7-43P04211 117 aa5.95□□□□□ -1.46
COL1A1-210ENST00000504289 DSCR10P59022 87 aa5.95□□□□□ -1.46
COL1A1-210ENST00000504289 BIRC6Q9NR09 4857 aa5.94□□□□□ -1.46
COL1A1-210ENST00000504289 NDUFC1O43677 76 aa5.93□□□□□ -1.46
COL1A1-210ENST00000504289 KLKP1Q107X0 134 aa5.93□□□□□ -1.46
COL1A1-210ENST00000504289 EPPK1P58107 5090 aaKnown RBP5.93□□□□□ -1.46
COL1A1-210ENST00000504289 SRRM2Q9UQ35 2752 aaKnown RBP5.92□□□□□ -1.46
COL1A1-210ENST00000504289 KRTAP10-2P60368 255 aa5.92□□□□□ -1.46
COL1A1-210ENST00000504289 Q8N9L7 120 aa5.92□□□□□ -1.46
COL1A1-210ENST00000504289 KRTAP17-1Q9BYP8 105 aa5.92□□□□□ -1.46
COL1A1-210ENST00000504289 OCR1Q9BZK8 76 aa5.92□□□□□ -1.46
COL1A1-210ENST00000504289 LINC00472Q9H8W2 130 aa5.92□□□□□ -1.46
COL1A1-210ENST00000504289 RYR2Q92736 4967 aa5.91□□□□□ -1.46
COL1A1-210ENST00000504289 DNAH8Q96JB1 4490 aa5.91□□□□□ -1.46
COL1A1-210ENST00000504289 CD164Q04900 197 aa5.91□□□□□ -1.46
COL1A1-210ENST00000504289 LINC00336Q6ZUF6 198 aa5.91□□□□□ -1.46
COL1A1-210ENST00000504289 CIRBP-AS1Q8TBR5 109 aa5.91□□□□□ -1.46
COL1A1-210ENST00000504289 DNAH11Q96DT5 4516 aa5.9□□□□□ -1.46
COL1A1-210ENST00000504289 FRAS1Q86XX4 4008 aa5.9□□□□□ -1.46
COL1A1-210ENST00000504289 A8MWP4 228 aa5.9□□□□□ -1.46
COL1A1-210ENST00000504289 HCG22E2RYF7 251 aa5.9□□□□□ -1.46
COL1A1-210ENST00000504289 K7EQZ3 153 aa5.9□□□□□ -1.46
COL1A1-210ENST00000504289 SSBP3-AS1Q7Z2R9 100 aa5.9□□□□□ -1.46
COL1A1-210ENST00000504289 Q5XG85 94 aa5.89□□□□□ -1.47
COL1A1-210ENST00000504289 PRR15Q8IV56 129 aa5.89□□□□□ -1.47
COL1A1-210ENST00000504289 C20orf197Q8N268 126 aa5.89□□□□□ -1.47
COL1A1-210ENST00000504289 IGLV9-49A0A0B4J1Y8 123 aa5.88□□□□□ -1.47
COL1A1-210ENST00000504289 A0A0G2JQZ4 141 aa5.88□□□□□ -1.47
COL1A1-210ENST00000504289 LCE6AA0A183 80 aa5.88□□□□□ -1.47
COL1A1-210ENST00000504289 NDUFB1O75438 58 aa5.88□□□□□ -1.47
COL1A1-210ENST00000504289 FAM229BQ4G0N7 80 aa5.88□□□□□ -1.47
COL1A1-210ENST00000504289 KRTAP10-1P60331 282 aa5.87□□□□□ -1.47
COL1A1-210ENST00000504289 FAM30AQ9NZY2 134 aa5.87□□□□□ -1.47
COL1A1-210ENST00000504289 SACSQ9NZJ4 4579 aa5.86□□□□□ -1.47
COL1A1-210ENST00000504289 MOBPQ13875 183 aa5.86□□□□□ -1.47
COL1A1-210ENST00000504289 TMEM254Q8TBM7 123 aa5.86□□□□□ -1.47
COL1A1-210ENST00000504289 SERP1Q9Y6X1 66 aa5.86□□□□□ -1.47
COL1A1-210ENST00000504289 DNAH5Q8TE73 4624 aa5.86□□□□□ -1.47
COL1A1-210ENST00000504289 PRO0628Q9UI54 55 aa5.85□□□□□ -1.47
COL1A1-210ENST00000504289 KRTAP29-1A8MX34 341 aaPredicted RBP5.84□□□□□ -1.47
COL1A1-210ENST00000504289 ATP5EP56381 51 aaPredicted RBP5.84□□□□□ -1.47
COL1A1-210ENST00000504289 ASB16-AS1Q495Z4 193 aa5.84□□□□□ -1.47
COL1A1-210ENST00000504289 FAT2Q9NYQ8 4349 aa5.84□□□□□ -1.48
COL1A1-210ENST00000504289 A0A0U1RQV1 116 aa5.83□□□□□ -1.48
COL1A1-210ENST00000504289 H7BZZ5 65 aa5.83□□□□□ -1.48
COL1A1-210ENST00000504289 OXTP01178 125 aa5.83□□□□□ -1.48
COL1A1-210ENST00000504289 C4orf26Q17RF5 130 aa5.83□□□□□ -1.48
COL1A1-210ENST00000504289 PKD1P98161 4303 aa5.83□□□□□ -1.48
COL1A1-210ENST00000504289 H3BPC8 53 aa5.82□□□□□ -1.48
COL1A1-210ENST00000504289 CASC2Q6XLA1 102 aa5.82□□□□□ -1.48
COL1A1-210ENST00000504289 Q96NJ1 140 aa5.82□□□□□ -1.48
COL1A1-210ENST00000504289 CYSTM1Q9H1C7 97 aa5.82□□□□□ -1.48
COL1A1-210ENST00000504289 SMIM26A0A096LP01 95 aa5.81□□□□□ -1.48
COL1A1-210ENST00000504289 FAM236DA0A1B0GTK5 79 aa5.81□□□□□ -1.48
COL1A1-210ENST00000504289 FAM236CP0DP71 79 aa5.81□□□□□ -1.48
COL1A1-210ENST00000504289 DEFB116Q30KQ4 102 aa5.81□□□□□ -1.48
COL1A1-210ENST00000504289 HRCT1Q6UXD1 115 aa5.81□□□□□ -1.48
COL1A1-210ENST00000504289 CDK2AP2O75956 126 aa5.8□□□□□ -1.48
COL1A1-210ENST00000504289 TP53AIP1Q9HCN2 124 aa5.79□□□□□ -1.48
COL1A1-210ENST00000504289 MMP24-AS1A0A0U1RRL7 71 aa5.78□□□□□ -1.48
COL1A1-210ENST00000504289 A0A1B0GVX0 72 aa5.78□□□□□ -1.48
COL1A1-210ENST00000504289 MP68P56378 58 aa5.78□□□□□ -1.48
COL1A1-210ENST00000504289 ANAPC11Q9NYG5 84 aa5.78□□□□□ -1.48
COL1A1-210ENST00000504289 SNURFQ9Y675 71 aa5.78□□□□□ -1.48
COL1A1-210ENST00000504289 hDV103S1A0JD37 113 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms