RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 PRO0255Q9UI72 69 aa0.88□□□□□ -2.27
HMGB3P17-201ENST00000504195 DOPEY2Q9Y3R5 2298 aa0.88□□□□□ -2.27
HMGB3P17-201ENST00000504195 SORL1Q92673 2214 aa0.88□□□□□ -2.27
HMGB3P17-201ENST00000504195 DEFB1P60022 68 aa0.87□□□□□ -2.27
HMGB3P17-201ENST00000504195 S4R3F8 94 aa0.87□□□□□ -2.27
HMGB3P17-201ENST00000504195 CNOT1A5YKK6 2376 aaKnown RBP0.87□□□□□ -2.27
HMGB3P17-201ENST00000504195 TPRP12270 2363 aaKnown RBP0.87□□□□□ -2.27
HMGB3P17-201ENST00000504195 CNTRLQ7Z7A1 2325 aa0.86□□□□□ -2.27
HMGB3P17-201ENST00000504195 KNL1Q8NG31 2342 aa0.86□□□□□ -2.27
HMGB3P17-201ENST00000504195 HTN1P15515 57 aa0.86□□□□□ -2.27
HMGB3P17-201ENST00000504195 ASCC3Q8N3C0 2202 aaKnown RBP0.86□□□□□ -2.27
HMGB3P17-201ENST00000504195 WNK1Q9H4A3 2382 aa0.86□□□□□ -2.27
HMGB3P17-201ENST00000504195 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.86□□□□□ -2.27
HMGB3P17-201ENST00000504195 H3BNG1 76 aa0.85□□□□□ -2.27
HMGB3P17-201ENST00000504195 M0QZ58 72 aa0.85□□□□□ -2.27
HMGB3P17-201ENST00000504195 CACNA1EQ15878 2313 aa0.85□□□□□ -2.27
HMGB3P17-201ENST00000504195 DEFB124Q8NES8 71 aa0.85□□□□□ -2.27
HMGB3P17-201ENST00000504195 PIEZO2Q9H5I5 2752 aa0.85□□□□□ -2.27
HMGB3P17-201ENST00000504195 PLCE1Q9P212 2302 aa0.85□□□□□ -2.27
HMGB3P17-201ENST00000504195 APLNQ9ULZ1 77 aa0.84□□□□□ -2.27
HMGB3P17-201ENST00000504195 CACNA1BQ00975 2339 aa0.84□□□□□ -2.28
HMGB3P17-201ENST00000504195 ICE1Q9Y2F5 2266 aa0.84□□□□□ -2.28
HMGB3P17-201ENST00000504195 CACNA1GO43497 2377 aa0.83□□□□□ -2.28
HMGB3P17-201ENST00000504195 SPINK1P00995 79 aa0.83□□□□□ -2.28
HMGB3P17-201ENST00000504195 KRTAP6-3Q3LI67 103 aa0.83□□□□□ -2.28
HMGB3P17-201ENST00000504195 KRTAP13-4Q3LI77 160 aa0.83□□□□□ -2.28
HMGB3P17-201ENST00000504195 MUC6Q6W4X9 2439 aa0.83□□□□□ -2.28
HMGB3P17-201ENST00000504195 COL6A6A6NMZ7 2263 aa0.82□□□□□ -2.28
HMGB3P17-201ENST00000504195 KRTAP12-1P59990 96 aa0.82□□□□□ -2.28
HMGB3P17-201ENST00000504195 DEFB103AP81534 67 aa0.82□□□□□ -2.28
HMGB3P17-201ENST00000504195 IGF2RP11717 2491 aa0.82□□□□□ -2.28
HMGB3P17-201ENST00000504195 AHCTF1Q8WYP5 2266 aa0.82□□□□□ -2.28
HMGB3P17-201ENST00000504195 SPTBN1Q01082 2364 aaKnown RBP0.81□□□□□ -2.28
HMGB3P17-201ENST00000504195 LINC01556Q5JQF7 62 aa0.81□□□□□ -2.28
HMGB3P17-201ENST00000504195 FAM208BQ5VWN6 2430 aa0.81□□□□□ -2.28
HMGB3P17-201ENST00000504195 WNK2Q9Y3S1 2297 aa0.81□□□□□ -2.28
HMGB3P17-201ENST00000504195 CHD6Q8TD26 2715 aa0.8□□□□□ -2.28
HMGB3P17-201ENST00000504195 TENM2Q9NT68 2774 aa0.8□□□□□ -2.28
HMGB3P17-201ENST00000504195 PCNX1Q96RV3 2341 aa0.8□□□□□ -2.28
HMGB3P17-201ENST00000504195 DEFB136Q30KP8 78 aa0.8□□□□□ -2.28
HMGB3P17-201ENST00000504195 DEFB133Q30KQ1 61 aa0.8□□□□□ -2.28
HMGB3P17-201ENST00000504195 VPS13DQ5THJ4 4388 aa0.8□□□□□ -2.28
HMGB3P17-201ENST00000504195 ABCA1O95477 2261 aa0.8□□□□□ -2.28
HMGB3P17-201ENST00000504195 WDR87Q6ZQQ6 2873 aa0.79□□□□□ -2.28
HMGB3P17-201ENST00000504195 TENM1Q9UKZ4 2725 aa0.79□□□□□ -2.28
HMGB3P17-201ENST00000504195 A0A0D9SG42 100 aa0.79□□□□□ -2.28
HMGB3P17-201ENST00000504195 RPS29P62273 56 aaKnown RBP0.79□□□□□ -2.28
HMGB3P17-201ENST00000504195 AKAP6Q13023 2319 aa0.79□□□□□ -2.28
HMGB3P17-201ENST00000504195 FN1P02751 2386 aaKnown RBP0.79□□□□□ -2.28
HMGB3P17-201ENST00000504195 FLG2Q5D862 2391 aaPredicted RBP0.79□□□□□ -2.28
HMGB3P17-201ENST00000504195 BAHCC1Q9P281 2608 aa0.79□□□□□ -2.28
HMGB3P17-201ENST00000504195 A0A096LPF7 62 aa0.78□□□□□ -2.28
HMGB3P17-201ENST00000504195 SPART-AS1P0CW21 52 aa0.78□□□□□ -2.28
HMGB3P17-201ENST00000504195 A0A0C4DFX4 3053 aa0.78□□□□□ -2.28
HMGB3P17-201ENST00000504195 ZNF462Q96JM2 2506 aa0.78□□□□□ -2.28
HMGB3P17-201ENST00000504195 U3KQA8 63 aa0.77□□□□□ -2.29
HMGB3P17-201ENST00000504195 ZDBF2Q9HCK1 2354 aa0.77□□□□□ -2.29
HMGB3P17-201ENST00000504195 GPR98Q8WXG9 6306 aa0.76□□□□□ -2.29
HMGB3P17-201ENST00000504195 SPTBN4Q9H254 2564 aa0.76□□□□□ -2.29
HMGB3P17-201ENST00000504195 KRTAP5-10Q6L8G5 202 aa0.76□□□□□ -2.29
HMGB3P17-201ENST00000504195 SPINK6Q6UWN8 80 aa0.76□□□□□ -2.29
HMGB3P17-201ENST00000504195 SPTA1P02549 2419 aa0.76□□□□□ -2.29
HMGB3P17-201ENST00000504195 JMJD1CQ15652 2540 aa0.75□□□□□ -2.29
HMGB3P17-201ENST00000504195 A0A096LNI7 61 aa0.75□□□□□ -2.29
HMGB3P17-201ENST00000504195 C9orf92A6NGG3 77 aa0.75□□□□□ -2.29
HMGB3P17-201ENST00000504195 TNP1P09430 55 aa0.75□□□□□ -2.29
HMGB3P17-201ENST00000504195 AKAP9Q99996 3911 aa0.75□□□□□ -2.29
HMGB3P17-201ENST00000504195 MYCBP2O75592 4640 aa0.75□□□□□ -2.29
HMGB3P17-201ENST00000504195 ACACAQ13085 2346 aa0.75□□□□□ -2.29
HMGB3P17-201ENST00000504195 CHD7Q9P2D1 2997 aa0.75□□□□□ -2.29
HMGB3P17-201ENST00000504195 OTOGQ6ZRI0 2925 aa0.75□□□□□ -2.29
HMGB3P17-201ENST00000504195 VWFP04275 2813 aa0.74□□□□□ -2.29
HMGB3P17-201ENST00000504195 DNAH11Q96DT5 4516 aa0.74□□□□□ -2.29
HMGB3P17-201ENST00000504195 MAP1BP46821 2468 aaKnown RBP0.74□□□□□ -2.29
HMGB3P17-201ENST00000504195 SPTBN2O15020 2390 aa0.74□□□□□ -2.29
HMGB3P17-201ENST00000504195 PTPRZ1P23471 2315 aaPredicted RBP0.73□□□□□ -2.29
HMGB3P17-201ENST00000504195 MAP1AP78559 2803 aaPredicted RBP0.73□□□□□ -2.29
HMGB3P17-201ENST00000504195 CACNA1HO95180 2353 aa0.73□□□□□ -2.29
HMGB3P17-201ENST00000504195 ASH1LQ9NR48 2969 aaKnown RBP0.73□□□□□ -2.29
HMGB3P17-201ENST00000504195 SACSQ9NZJ4 4579 aa0.73□□□□□ -2.29
HMGB3P17-201ENST00000504195 DEFB135Q30KP9 77 aa0.72□□□□□ -2.29
HMGB3P17-201ENST00000504195 DSPP15924 2871 aaKnown RBP0.72□□□□□ -2.29
HMGB3P17-201ENST00000504195 AHNAK2Q8IVF2 5795 aa0.72□□□□□ -2.29
HMGB3P17-201ENST00000504195 UBR5O95071 2799 aaPredicted RBP0.72□□□□□ -2.29
HMGB3P17-201ENST00000504195 CELSR2Q9HCU4 2923 aa0.71□□□□□ -2.29
HMGB3P17-201ENST00000504195 SPTBN5Q9NRC6 3674 aaKnown RBP0.71□□□□□ -2.3
HMGB3P17-201ENST00000504195 MGAQ8IWI9 3026 aa0.71□□□□□ -2.3
HMGB3P17-201ENST00000504195 PKDREJQ9NTG1 2253 aa0.71□□□□□ -2.3
HMGB3P17-201ENST00000504195 DMDP11532 3685 aa0.71□□□□□ -2.3
HMGB3P17-201ENST00000504195 F8P00451 2351 aa0.71□□□□□ -2.3
HMGB3P17-201ENST00000504195 ROS1P08922 2347 aa0.71□□□□□ -2.3
HMGB3P17-201ENST00000504195 TNRC18O15417 2968 aaPredicted RBP0.7□□□□□ -2.3
HMGB3P17-201ENST00000504195 CSPG4Q6UVK1 2322 aa0.7□□□□□ -2.3
HMGB3P17-201ENST00000504195 NCOR2Q9Y618 2525 aa0.7□□□□□ -2.3
HMGB3P17-201ENST00000504195 NBPF19A0A087WUL8 3843 aa0.7□□□□□ -2.3
HMGB3P17-201ENST00000504195 MEGF8Q7Z7M0 2845 aa0.7□□□□□ -2.3
HMGB3P17-201ENST00000504195 HUWE1Q7Z6Z7 4374 aaKnown RBP0.7□□□□□ -2.3
HMGB3P17-201ENST00000504195 APC2O95996 2303 aa0.7□□□□□ -2.3
HMGB3P17-201ENST00000504195 ITPR3Q14573 2671 aa0.7□□□□□ -2.3
HMGB3P17-201ENST00000504195 COL6A5A8TX70 2615 aa0.69□□□□□ -2.3
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