RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 DEFB4AO15263 64 aa3.8□□□□□ -1.8
CLCN3-204ENST00000504131 KRTAP11-1Q8IUC1 163 aa3.79□□□□□ -1.8
CLCN3-204ENST00000504131 R4GN34 69 aa3.79□□□□□ -1.8
CLCN3-204ENST00000504131 A0A1B0GUV1 79 aa3.79□□□□□ -1.8
CLCN3-204ENST00000504131 TRIOO75962 3097 aa3.79□□□□□ -1.8
CLCN3-204ENST00000504131 ABCA12Q86UK0 2595 aa3.79□□□□□ -1.8
CLCN3-204ENST00000504131 IGLV5-48A0A075B6I7 105 aa3.79□□□□□ -1.8
CLCN3-204ENST00000504131 PRR34Q9NV39 138 aa3.78□□□□□ -1.8
CLCN3-204ENST00000504131 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.78□□□□□ -1.8
CLCN3-204ENST00000504131 PLAC4Q8WY50 150 aa3.77□□□□□ -1.81
CLCN3-204ENST00000504131 SPENQ96T58 3664 aaKnown RBP3.76□□□□□ -1.81
CLCN3-204ENST00000504131 ZFHX3Q15911 3703 aa3.76□□□□□ -1.81
CLCN3-204ENST00000504131 MYO9AB2RTY4 2548 aa3.76□□□□□ -1.81
CLCN3-204ENST00000504131 A0A087WTM6 91 aa3.76□□□□□ -1.81
CLCN3-204ENST00000504131 RPL37P61927 97 aaKnown RBP3.76□□□□□ -1.81
CLCN3-204ENST00000504131 USP9XQ93008 2570 aaPredicted RBP3.75□□□□□ -1.81
CLCN3-204ENST00000504131 LAMA1P25391 3075 aa3.75□□□□□ -1.81
CLCN3-204ENST00000504131 PLAC8Q9NZF1 115 aa3.75□□□□□ -1.81
CLCN3-204ENST00000504131 WNK1Q9H4A3 2382 aa3.74□□□□□ -1.81
CLCN3-204ENST00000504131 COL6A3P12111 3177 aa3.74□□□□□ -1.81
CLCN3-204ENST00000504131 PANO1I0J062 215 aa3.74□□□□□ -1.81
CLCN3-204ENST00000504131 KRTAP21-3Q3LHN1 58 aa3.74□□□□□ -1.81
CLCN3-204ENST00000504131 VCANP13611 3396 aa3.74□□□□□ -1.81
CLCN3-204ENST00000504131 POLQO75417 2590 aa3.73□□□□□ -1.81
CLCN3-204ENST00000504131 H1FX-AS1Q4G0G2 97 aa3.73□□□□□ -1.81
CLCN3-204ENST00000504131 LINC00472Q9H8W2 130 aa3.73□□□□□ -1.81
CLCN3-204ENST00000504131 DNAH14Q0VDD8 3507 aa3.73□□□□□ -1.81
CLCN3-204ENST00000504131 USP9YO00507 2555 aaPredicted RBP3.73□□□□□ -1.81
CLCN3-204ENST00000504131 WDR87Q6ZQQ6 2873 aa3.73□□□□□ -1.81
CLCN3-204ENST00000504131 TLN2Q9Y4G6 2542 aa3.72□□□□□ -1.81
CLCN3-204ENST00000504131 MMP24-AS1A0A0U1RRL7 71 aa3.72□□□□□ -1.81
CLCN3-204ENST00000504131 COX6B2Q6YFQ2 88 aa3.72□□□□□ -1.81
CLCN3-204ENST00000504131 ZFHX4Q86UP3 3567 aa3.71□□□□□ -1.82
CLCN3-204ENST00000504131 ANKRD17O75179 2603 aaKnown RBP3.71□□□□□ -1.82
CLCN3-204ENST00000504131 FN1P02751 2386 aaKnown RBP3.71□□□□□ -1.82
CLCN3-204ENST00000504131 MYO15AQ9UKN7 3530 aa3.71□□□□□ -1.82
CLCN3-204ENST00000504131 HELZ2Q9BYK8 2649 aaKnown RBP3.7□□□□□ -1.82
CLCN3-204ENST00000504131 HECTD1Q9ULT8 2610 aa3.7□□□□□ -1.82
CLCN3-204ENST00000504131 LINC01556Q5JQF7 62 aa3.7□□□□□ -1.82
CLCN3-204ENST00000504131 Q8N1X5 172 aa3.7□□□□□ -1.82
CLCN3-204ENST00000504131 H3BNG1 76 aa3.69□□□□□ -1.82
CLCN3-204ENST00000504131 GVQW2A0A096LPI5 108 aaPredicted RBP3.68□□□□□ -1.82
CLCN3-204ENST00000504131 KLK9Q2XQG4 91 aa3.68□□□□□ -1.82
CLCN3-204ENST00000504131 FLG2Q5D862 2391 aaPredicted RBP3.67□□□□□ -1.82
CLCN3-204ENST00000504131 KRTAP26-1Q6PEX3 210 aa3.67□□□□□ -1.82
CLCN3-204ENST00000504131 FRYLO94915 3013 aa3.66□□□□□ -1.82
CLCN3-204ENST00000504131 KRTAP29-1A8MX34 341 aaPredicted RBP3.66□□□□□ -1.82
CLCN3-204ENST00000504131 WDFY4Q6ZS81 3184 aa3.65□□□□□ -1.82
CLCN3-204ENST00000504131 VPS13AQ96RL7 3174 aa3.65□□□□□ -1.82
CLCN3-204ENST00000504131 FRYQ5TBA9 3013 aa3.65□□□□□ -1.82
CLCN3-204ENST00000504131 C10orf95Q9H7T3 257 aa3.65□□□□□ -1.83
CLCN3-204ENST00000504131 KRTAP1-3Q8IUG1 177 aa3.65□□□□□ -1.83
CLCN3-204ENST00000504131 ACANP16112 2415 aa3.64□□□□□ -1.83
CLCN3-204ENST00000504131 BAHCC1Q9P281 2608 aa3.64□□□□□ -1.83
CLCN3-204ENST00000504131 K7EIL1 84 aa3.63□□□□□ -1.83
CLCN3-204ENST00000504131 PP632Q6XCG6 107 aa3.63□□□□□ -1.83
CLCN3-204ENST00000504131 CFAP54Q96N23 3096 aa3.63□□□□□ -1.83
CLCN3-204ENST00000504131 KRTAP1-1Q07627 177 aa3.63□□□□□ -1.83
CLCN3-204ENST00000504131 ZNF292O60281 2723 aa3.62□□□□□ -1.83
CLCN3-204ENST00000504131 KRTAP15-1Q3LI76 137 aa3.61□□□□□ -1.83
CLCN3-204ENST00000504131 GIG44P09565 113 aaPredicted RBP3.6□□□□□ -1.83
CLCN3-204ENST00000504131 DMXL1Q9Y485 3027 aa3.59□□□□□ -1.83
CLCN3-204ENST00000504131 DCHS1Q96JQ0 3298 aa3.59□□□□□ -1.83
CLCN3-204ENST00000504131 SPACA4Q8TDM5 124 aa3.59□□□□□ -1.83
CLCN3-204ENST00000504131 USP24Q9UPU5 2620 aa3.59□□□□□ -1.84
CLCN3-204ENST00000504131 PRO2289Q9P1D8 64 aa3.58□□□□□ -1.84
CLCN3-204ENST00000504131 SETD2Q9BYW2 2564 aaPredicted RBP3.57□□□□□ -1.84
CLCN3-204ENST00000504131 FREM2Q5SZK8 3169 aa3.55□□□□□ -1.84
CLCN3-204ENST00000504131 CFAP47Q6ZTR5 3102 aa3.55□□□□□ -1.84
CLCN3-204ENST00000504131 SPEGQ15772 3267 aa3.55□□□□□ -1.84
CLCN3-204ENST00000504131 KRTAP10-11P60412 298 aa3.55□□□□□ -1.84
CLCN3-204ENST00000504131 ANAPC11Q9NYG5 84 aa3.54□□□□□ -1.84
CLCN3-204ENST00000504131 H0YAA0 97 aa3.52□□□□□ -1.85
CLCN3-204ENST00000504131 CFAP46Q8IYW2 2715 aa3.52□□□□□ -1.85
CLCN3-204ENST00000504131 ASPMQ8IZT6 3477 aa3.51□□□□□ -1.85
CLCN3-204ENST00000504131 KRTAP10-3P60369 221 aa3.51□□□□□ -1.85
CLCN3-204ENST00000504131 Q6ZSA8 131 aa3.5□□□□□ -1.85
CLCN3-204ENST00000504131 MGAM2Q2M2H8 2515 aa3.5□□□□□ -1.85
CLCN3-204ENST00000504131 LOC400499M0QZD8 3231 aa3.49□□□□□ -1.85
CLCN3-204ENST00000504131 KALRNO60229 2985 aa3.49□□□□□ -1.85
CLCN3-204ENST00000504131 ITPR3Q14573 2671 aa3.48□□□□□ -1.85
CLCN3-204ENST00000504131 ITPR1Q14643 2758 aa3.48□□□□□ -1.85
CLCN3-204ENST00000504131 SETXQ7Z333 2677 aaKnown RBP3.48□□□□□ -1.85
CLCN3-204ENST00000504131 KMT2BQ9UMN6 2715 aaPredicted RBP3.47□□□□□ -1.85
CLCN3-204ENST00000504131 FLNAP21333 2647 aaKnown RBP3.47□□□□□ -1.85
CLCN3-204ENST00000504131 INE1O15225 51 aa3.47□□□□□ -1.85
CLCN3-204ENST00000504131 MAST4O15021 2626 aa3.47□□□□□ -1.85
CLCN3-204ENST00000504131 TPRXLQ17RH7 258 aa3.47□□□□□ -1.85
CLCN3-204ENST00000504131 CELSR3Q9NYQ7 3312 aa3.47□□□□□ -1.85
CLCN3-204ENST00000504131 ATRQ13535 2644 aa3.47□□□□□ -1.85
CLCN3-204ENST00000504131 ATMQ13315 3056 aa3.47□□□□□ -1.85
CLCN3-204ENST00000504131 AKAP13Q12802 2813 aa3.46□□□□□ -1.85
CLCN3-204ENST00000504131 PRRC2CQ9Y520 2896 aaKnown RBP3.45□□□□□ -1.86
CLCN3-204ENST00000504131 UNC79Q9P2D8 2635 aa3.44□□□□□ -1.86
CLCN3-204ENST00000504131 S4R3F8 94 aa3.44□□□□□ -1.86
CLCN3-204ENST00000504131 LAMA5O15230 3695 aa3.42□□□□□ -1.86
CLCN3-204ENST00000504131 UBR5O95071 2799 aaPredicted RBP3.42□□□□□ -1.86
CLCN3-204ENST00000504131 DMXL2Q8TDJ6 3036 aa3.42□□□□□ -1.86
CLCN3-204ENST00000504131 AKAP9Q99996 3911 aa3.42□□□□□ -1.86
CLCN3-204ENST00000504131 CENPEQ02224 2701 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms