RNA–Protein interactions for RNA: ENST00000503659.5

RNF4-204, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-204ENST00000503659 PAM16Q9Y3D7 125 aa9.96□□□□□ -0.82
RNF4-204ENST00000503659 SPATA45Q537H7 98 aa9.95□□□□□ -0.82
RNF4-204ENST00000503659 F8WEM9 126 aa9.94□□□□□ -0.82
RNF4-204ENST00000503659 CFC1BP0CG36 223 aa9.94□□□□□ -0.82
RNF4-204ENST00000503659 CFC1P0CG37 223 aa9.94□□□□□ -0.82
RNF4-204ENST00000503659 BVES-AS1Q5T3Y7 98 aa9.94□□□□□ -0.82
RNF4-204ENST00000503659 C2orf91Q6ZV80 131 aa9.94□□□□□ -0.82
RNF4-204ENST00000503659 HIGD1BQ9P298 99 aa9.94□□□□□ -0.82
RNF4-204ENST00000503659 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.93□□□□□ -0.82
RNF4-204ENST00000503659 IGLV8-61A0A075B6I0 122 aa9.92□□□□□ -0.82
RNF4-204ENST00000503659 VAMP8Q9BV40 100 aa9.91□□□□□ -0.82
RNF4-204ENST00000503659 IGFL1Q6UW32 110 aa9.9□□□□□ -0.82
RNF4-204ENST00000503659 A0A0B4J2C4 111 aa9.89□□□□□ -0.83
RNF4-204ENST00000503659 PCOTHQ58A44 107 aa9.89□□□□□ -0.83
RNF4-204ENST00000503659 Q6JHZ5 121 aa9.89□□□□□ -0.83
RNF4-204ENST00000503659 CLEC2BQ92478 149 aa9.89□□□□□ -0.83
RNF4-204ENST00000503659 TCL1BO95988 128 aa9.88□□□□□ -0.83
RNF4-204ENST00000503659 OCIAD2Q56VL3 154 aa9.88□□□□□ -0.83
RNF4-204ENST00000503659 PPDPFLQ8WWR9 84 aa9.88□□□□□ -0.83
RNF4-204ENST00000503659 RAB37Q96AX2 223 aa9.88□□□□□ -0.83
RNF4-204ENST00000503659 TRBV7-7A0A0K0K1E9 115 aa9.85□□□□□ -0.83
RNF4-204ENST00000503659 FAM218AQ96MZ4 157 aa9.85□□□□□ -0.83
RNF4-204ENST00000503659 CEND1Q8N111 149 aa9.84□□□□□ -0.83
RNF4-204ENST00000503659 KRTAP9-6A0A140TA67 174 aa9.82□□□□□ -0.84
RNF4-204ENST00000503659 H3BUT2 72 aa9.82□□□□□ -0.84
RNF4-204ENST00000503659 SNHG12Q9BXW3 62 aa9.82□□□□□ -0.84
RNF4-204ENST00000503659 H0YGX0 51 aa9.81□□□□□ -0.84
RNF4-204ENST00000503659 KRTAP19-2Q3LHN2 52 aa9.81□□□□□ -0.84
RNF4-204ENST00000503659 LCE2CQ5TA81 110 aa9.81□□□□□ -0.84
RNF4-204ENST00000503659 FXYD2P54710 66 aa9.8□□□□□ -0.84
RNF4-204ENST00000503659 RPL37P61927 97 aaKnown RBP9.79□□□□□ -0.84
RNF4-204ENST00000503659 PYY3Q5JQD4 70 aa9.79□□□□□ -0.84
RNF4-204ENST00000503659 PRO1854Q9UHT4 67 aa9.79□□□□□ -0.84
RNF4-204ENST00000503659 TMEM238LA0A1B0GVL6 79 aa9.77□□□□□ -0.85
RNF4-204ENST00000503659 A6NJY4 79 aa9.77□□□□□ -0.85
RNF4-204ENST00000503659 LCE2DQ5TA82 110 aaPredicted RBP9.76□□□□□ -0.85
RNF4-204ENST00000503659 TRIAP1O43715 76 aa9.74□□□□□ -0.85
RNF4-204ENST00000503659 SNCGO76070 127 aa9.74□□□□□ -0.85
RNF4-204ENST00000503659 NDUFV3P56181 108 aaKnown RBP9.74□□□□□ -0.85
RNF4-204ENST00000503659 A0A1B0GX51 115 aa9.73□□□□□ -0.85
RNF4-204ENST00000503659 Q6Q795 121 aa9.73□□□□□ -0.85
RNF4-204ENST00000503659 HSD52Q0P140 79 aa9.71□□□□□ -0.86
RNF4-204ENST00000503659 K7ERJ3 54 aa9.7□□□□□ -0.86
RNF4-204ENST00000503659 LST1O00453 97 aa9.69□□□□□ -0.86
RNF4-204ENST00000503659 H3BMG7 143 aa9.68□□□□□ -0.86
RNF4-204ENST00000503659 MT1HP80294 61 aa9.68□□□□□ -0.86
RNF4-204ENST00000503659 TEN1Q86WV5 123 aa9.68□□□□□ -0.86
RNF4-204ENST00000503659 TMA7Q9Y2S6 64 aaKnown RBP9.68□□□□□ -0.86
RNF4-204ENST00000503659 FABP2P12104 132 aa9.67□□□□□ -0.86
RNF4-204ENST00000503659 OBSCN-AS1Q96MR7 158 aa9.67□□□□□ -0.86
RNF4-204ENST00000503659 SS18L2Q9UHA2 77 aa9.66□□□□□ -0.86
RNF4-204ENST00000503659 GHRHP01286 108 aa9.65□□□□□ -0.86
RNF4-204ENST00000503659 A0A087WSZ3 146 aa9.64□□□□□ -0.87
RNF4-204ENST00000503659 UQCR10Q9UDW1 63 aa9.63□□□□□ -0.87
RNF4-204ENST00000503659 A0A1W2PNM2 257 aa9.62□□□□□ -0.87
RNF4-204ENST00000503659 PSMB2P49721 201 aa9.62□□□□□ -0.87
RNF4-204ENST00000503659 Q75L30 129 aa9.62□□□□□ -0.87
RNF4-204ENST00000503659 Q96NJ1 140 aa9.62□□□□□ -0.87
RNF4-204ENST00000503659 DNAL4O96015 105 aa9.6□□□□□ -0.87
RNF4-204ENST00000503659 ORMDL1Q9P0S3 153 aa9.6□□□□□ -0.87
RNF4-204ENST00000503659 FLGP20930 4061 aaPredicted RBP9.58□□□□□ -0.88
RNF4-204ENST00000503659 A0A1B0GV72 72 aa9.57□□□□□ -0.88
RNF4-204ENST00000503659 COX6CP09669 75 aa9.56□□□□□ -0.88
RNF4-204ENST00000503659 H3BQ85 93 aa9.55□□□□□ -0.88
RNF4-204ENST00000503659 ATP11AUNQ6ZP68 121 aa9.55□□□□□ -0.88
RNF4-204ENST00000503659 TMEM256-PLSCR3K7ERE1 68 aa9.54□□□□□ -0.88
RNF4-204ENST00000503659 LORP23490 312 aaPredicted RBP9.54□□□□□ -0.88
RNF4-204ENST00000503659 COX6B2Q6YFQ2 88 aa9.54□□□□□ -0.88
RNF4-204ENST00000503659 ANKRD29Q8N6D5 301 aa9.54□□□□□ -0.88
RNF4-204ENST00000503659 C20orf166-AS1Q96NR2 134 aa9.54□□□□□ -0.88
RNF4-204ENST00000503659 CRCT1Q9UGL9 99 aa9.54□□□□□ -0.88
RNF4-204ENST00000503659 TRBV7-4A0A0J9YYF1 115 aa9.53□□□□□ -0.88
RNF4-204ENST00000503659 KRTAP10-6P60371 365 aaPredicted RBP9.52□□□□□ -0.89
RNF4-204ENST00000503659 A8MUU9 505 aa9.51□□□□□ -0.89
RNF4-204ENST00000503659 M0R2T5 61 aa9.5□□□□□ -0.89
RNF4-204ENST00000503659 UBE2V1Q13404 147 aa9.5□□□□□ -0.89
RNF4-204ENST00000503659 SIGMAR1Q99720 223 aa9.5□□□□□ -0.89
RNF4-204ENST00000503659 TRACP01848 142 aa9.49□□□□□ -0.89
RNF4-204ENST00000503659 DSCR10P59022 87 aa9.49□□□□□ -0.89
RNF4-204ENST00000503659 CCKP06307 115 aa9.47□□□□□ -0.89
RNF4-204ENST00000503659 IGKV4-1P06312 121 aa9.45□□□□□ -0.9
RNF4-204ENST00000503659 SCGB1C2P0DMR2 95 aa9.45□□□□□ -0.9
RNF4-204ENST00000503659 FSIP2Q5CZC0 6907 aa9.44□□□□□ -0.9
RNF4-204ENST00000503659 LINC00472Q9H8W2 130 aa9.44□□□□□ -0.9
RNF4-204ENST00000503659 KRTAP16-1A8MUX0 517 aa9.43□□□□□ -0.9
RNF4-204ENST00000503659 DEFB116Q30KQ4 102 aa9.42□□□□□ -0.9
RNF4-204ENST00000503659 LINC00313P59037 77 aa9.41□□□□□ -0.9
RNF4-204ENST00000503659 NOTCH2NLQ7Z3S9 236 aa9.41□□□□□ -0.9
RNF4-204ENST00000503659 RBM3P98179 157 aaKnown RBP9.39□□□□□ -0.91
RNF4-204ENST00000503659 M0R143 59 aa9.37□□□□□ -0.91
RNF4-204ENST00000503659 BAALC-AS2P0C853 105 aa9.37□□□□□ -0.91
RNF4-204ENST00000503659 VPS25Q9BRG1 176 aa9.37□□□□□ -0.91
RNF4-204ENST00000503659 DSCR8Q96T75 97 aa9.36□□□□□ -0.91
RNF4-204ENST00000503659 NAA38Q9BRA0 125 aaKnown RBP9.36□□□□□ -0.91
RNF4-204ENST00000503659 SMIM6P0DI80 62 aa9.34□□□□□ -0.91
RNF4-204ENST00000503659 IGHV6-1A0A0B4J1U7 121 aa9.33□□□□□ -0.92
RNF4-204ENST00000503659 C9JAW5 83 aa9.31□□□□□ -0.92
RNF4-204ENST00000503659 ATXN8Q156A1 80 aa9.31□□□□□ -0.92
RNF4-204ENST00000503659 A0A1B0GVX0 72 aa9.29□□□□□ -0.92
RNF4-204ENST00000503659 Q6ZQT0 140 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms